Os08g0105100

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Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0105100| Description = Cyclin-like F-box domain containing protein| Version = NM_001067319.1 GI:115474374 GeneID:4344444| Length = 3202 bp|...")
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Gene Name

Os08g0105100

Description

Cyclin-like F-box domain containing protein

Version

NM_001067319.1 GI:115474374 GeneID:4344444

Length

3202 bp

Definition

Oryza sativa Japonica Group Os08g0105100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:277146..280347

Sequence Coding Region

277544..277547,278599..280268

Expression

GEO Profiles:Os08g0105100

Genome Context

<gbrowseImage1> name=NC_008401:277146..280347 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:277146..280347 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacttccgacgagctcgccggtgagggtgaggtcgacggcgcggagctgatcctgtcgctgccggaggacgtgctcgggctcatctccgcccacctccgcccgcgcgacctcctcgccctctccgccgcctcccgcagcctccgcaacgccgtctccaccgccgacaaggcgtggctcgcccagtgccgccgcctcctccccaccgcctcccacctcctcgcctggcgcaccgccctcgcccactcctccctcgccgtctgccgcttcctccactccgccgccccgctcctcggcctctgggcccaccagaaccccgagctcggcaacctcgtcctcgccctccctggcttcctctccctcgtcgccgtccgctccatcccccaggagctctccccgcgcctcctctgggcccccgtcttcgagctcctcgccgaccaccgcggccaccccgccttcctcttcctccacggcgccgcccacgactccctcttccccggcctcctctcctcctccctccaccccctcgccaacaccctcttcctcgaggcccacacctccacctccacctcccacttctcccgcctcgccttcgccgaccgccgccgcctcctcaacgccctcgtcgccgcctcccgcctcaccctcccccccgatgtcgccactgccccgctcttcgcgcgctccgacgccgacctcccgctgctcgccgcgcgccgggaggccatgctgcgcctgcacagccagtctggcgggggcatggtgcgcagggccgagatcgaggcgctgctgatcggggccaggaagacggcggcgctgccggccgacaccgccggcgacaagatgcggctgcggaggaccttctcggtggtcgccggttttgtcaggaacagcctgcggcagatggtgacacggtcggcgtccgccaattccagggctgagtacgcccaccccaagcatctgccattggacgagttcctgcgagccggagagagcgtcggcctgagcctccgtggcgcgcggatgaggctgtctatctaccggaattggccaagcatgcatgacaaccggtttgtgctctacaagctgacgacgcaggcgcccatgcctggccgggagtatgccggtttgtggggaggcacattcgggtggccgccagggcggccggaggatgagcgcaaacctggcaaggctctcttcttcctactcctctcctatgaggaggacagcgaagggaagcttcagctgattgcaaccaaggtgttggagggtacacactatgtcgtgcatccgaatgggtcctctatgtttatcgtgcgggtcggtgagccatccactgagacttttccgtggcaaaccgatgaggagtcgcgtgctgtggagatcaatagaagctttgctggtgagggcattgccaccgggtatgggttcaggtatcctggctcaaagcccggatcgctctttgtcctcctggatggccggcttgcatttgtttggagagagaacaaagctgttctcaccttgcaaaggctggacctggaggatatgataaggagaggggagcgtgtgccttcattgccgccgatacccaacttcgcctacctcacaaagtcttactccaatgtctttgctgtggcacctggcagcacgagcttcccagcttctccaaggtaa</cdnaseq>

Protein Sequence

<aaseq>MTSDELAGEGEVDGAELILSLPEDVLGLISAHLRPRDLLALSAA SRSLRNAVSTADKAWLAQCRRLLPTASHLLAWRTALAHSSLAVCRFLHSAAPLLGLWA HQNPELGNLVLALPGFLSLVAVRSIPQELSPRLLWAPVFELLADHRGHPAFLFLHGAA HDSLFPGLLSSSLHPLANTLFLEAHTSTSTSHFSRLAFADRRRLLNALVAASRLTLPP DVATAPLFARSDADLPLLAARREAMLRLHSQSGGGMVRRAEIEALLIGARKTAALPAD TAGDKMRLRRTFSVVAGFVRNSLRQMVTRSASANSRAEYAHPKHLPLDEFLRAGESVG LSLRGARMRLSIYRNWPSMHDNRFVLYKLTTQAPMPGREYAGLWGGTFGWPPGRPEDE RKPGKALFFLLLSYEEDSEGKLQLIATKVLEGTHYVVHPNGSSMFIVRVGEPSTETFP WQTDEESRAVEINRSFAGEGIATGYGFRYPGSKPGSLFVLLDGRLAFVWRENKAVLTL QRLDLEDMIRRGERVPSLPPIPNFAYLTKSYSNVFAVAPGSTSFPASPR</aaseq>

Gene Sequence

<dnaseqindica>2801..2804#80..1749#actttgttttgagtttggagggagagagagtagaggaaggaaacctccctccggatccaggaaatcctcatccatcctcatgacttccgacgagctcgccggtgagggtgaggtcgacggcgcggagctgatcctgtcgctgccggaggacgtgctcgggctcatctccgcccacctccgcccgcgcgacctcctcgccctctccgccgcctcccgcagcctccgcaacgccgtctccaccgccgacaaggcgtggctcgcccagtgccgccgcctcctccccaccgcctcccacctcctcgcctggcgcaccgccctcgcccactcctccctcgccgtctgccgcttcctccactccgccgccccgctcctcggcctctgggcccaccagaaccccgagctcggcaacctcgtcctcgccctccctggcttcctctccctcgtcgccgtccgctccatcccccaggagctctccccgcgcctcctctgggcccccgtcttcgagctcctcgccgaccaccgcggccaccccgccttcctcttcctccacggcgccgcccacgactccctcttccccggcctcctctcctcctccctccaccccctcgccaacaccctcttcctcgaggcccacacctccacctccacctcccacttctcccgcctcgccttcgccgaccgccgccgcctcctcaacgccctcgtcgccgcctcccgcctcaccctcccccccgatgtcgccactgccccgctcttcgcgcgctccgacgccgacctcccgctgctcgccgcgcgccgggaggccatgctgcgcctgcacagccagtctggcgggggcatggtgcgcagggccgagatcgaggcgctgctgatcggggccaggaagacggcggcgctgccggccgacaccgccggcgacaagatgcggctgcggaggaccttctcggtggtcgccggttttgtcaggaacagcctgcggcagatggtgacacggtcggcgtccgccaattccagggctgagtacgcccaccccaagcatctgccattggacgagttcctgcgagccggagagagcgtcggcctgagcctccgtggcgcgcggatgaggctgtctatctaccggaattggccaagcatgcatgacaaccggtttgtgctctacaagctgacgacgcaggcgcccatgcctggccgggagtatgccggtttgtggggaggcacattcgggtggccgccagggcggccggaggatgagcgcaaacctggcaaggctctcttcttcctactcctctcctatgaggaggacagcgaagggaagcttcagctgattgcaaccaaggtgttggagggtacacactatgtcgtgcatccgaatgggtcctctatgtttatcgtgcgggtcggtgagccatccactgagacttttccgtggcaaaccgatgaggagtcgcgtgctgtggagatcaatagaagctttgctggtgagggcattgccaccgggtatgggttcaggtatcctggctcaaagcccggatcgctctttgtcctcctggatggccggcttgcatttgtttggagagagaacaaagctgttctcaccttgcaaaggctggacctggaggatatgataaggagaggggagcgtgtgccttcattgccgccgatacccaacttcgcctacctcacaaagtcttactccaatgtctttgctgtggcacctggcagcacgagcttcccagcttctccaaggtatgcgtatcactagtgttactgcacctgcacatgatacctgttatgaattccagtccctggtgtattatcatgttgtataggtttatctattttggtaattcagttgtgagcaaaatcagacgctttatgctaaactttagatagtgagctcttgttgccaatgctaaactttagactgagctcttgctggttgataggtcattggaggattcagccagttttctttgactgcagccacttcttatcgacaggattaaagtgtcaagcctaaatgtagtgatcttagttctgttccatgcacgatttagttcttctttgaatgtaaattttaaggtgtcagtattcatggtgatggatagaaatacatgccccatcattctatactgctgtacagctgaaggctgtgccctcagtacacggcaaaatacatcagtgccttttctctgtacatggaaaaaatacacgagtaactggtaatttgcatttgttctgaaacagtagtcagcagtactaaatgactataaaacaagtgatcactggtaataaaaacttaatgtactagtttttatgtggttcttgttacactactgctttattgtagatttataattatatactagctagcctgtgctgtactgctgttaatcacgtataaactgagtaaggtccataggatgatccatgaatctctgaggattctgcttaccccatgcaaaataagactgtctgcatgaagttctattatcatattatacagttacctctttgtgaccagcctggagtgtaatctggacgaccatgtagagctcttccatttttctacgacttatgtgtgtgatttacagattctcagatatttgacctgtacccctgtaaaaacatggcagcttccttctaagttgtaacaaacagttttgtgaatatttgatcaaaatttctttatttttgcttccaaatgctttgtcttgtatagtctagcatcctatctatttagtgattatacttccattgatcaactcatttgacaagatgaaaccccttctgttaggtaaaagatggcttgggaaccgttatgatggtatcacctgatacagaggcaacagcgacagatctttgcgggatcatgttctactgtgcttccttgccatacgtcttgtactgaagatctgaatcccacatttttcaccctgaacctgaaggttggccatcaccgtacgttgatctgagttgatgtaccgctgctgctgctgttaatggaagcagcatggcagcagtgttaatatggtatatattggtaccctgaaggaaatgcagccaactccatctgtatttcccttgttactgaactggcatcttcatgcctgcagtaaactaaaatgtcaaaatttagcaaatgagctacagtcgcagatccagcctcctgatgataacatcatgaggtgttaaactg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0105100, RefSeq:Os08g0105100