BGIOSGA016223

From RiceWiki
Revision as of 04:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016223| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016223, complete gene.| tag = OsI_155...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016223

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016223, complete gene.

LocusTag

OsI_15580

Ensembl Transcript ID

BGIOSGA016223-TA

Ensembl Protein ID

BGIOSGA016223-PA

Length

3267

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:15871552..15874818

Sequence Coding Region

15871552..15871630,15872044..15872141,15872224..15872488,15872568..15872638,15872722..15872824
,15872900..15872959,15873212..15873423,15873509..15873580,15874125..15874181
,15874771..15874818

Genome Context

<gbrowseImage1> name=IndicaChromosome04:15871552..15874818 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:15871552..15874818 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGATCACAGAGCTTGTCGTCGAACGATATGCTCCTTCCGGGCATCGAACTGAATCACGCCACCGCATAGGAAAAGGCAATATGATCAAGGAATTTTCAAAATTTGATAAGAAATCTAAAGGTGTTTATGGCAGAAGACCATTGAAAGATATTTCATCAACTTGTTACAAAATGATTGATACAGTTGCTTCCTCTGATGATGTTCCAAAGAAGCACAACAATACAAGCTTTTTTGAAATGGTCGATTCTTCAATTCCTAATATGTTGCCTGTTGACATTAAGAACAAAATACATGGGCTACTTGTTCATTATTTTGGTAATGAGGATGATATGGCTGATGAGAGACCCAAAAAACTACTTGTTGATGTGTTGGCTCTGTTAGCTGATGCAAGCAAGAGTAATGCTGACACAAATTTATCTTCTGAAGTCGACAAATTGTCTAAAAGTTGCAATCCAACAGATCAAAACAATGATGAAAAAAATGATGTTACTTCTGCTCACAGTCCAAAGGACAATATGGACAATGATATTGATGATAACAGAAATGCAAACAATAAAGAGGAAATTGATAATGTACATGTTGCAAAAATAATGAAGAAGCTTACAAAAGAAGGTCAAGAATTTGTTACTCCAGTAAACTGCAATCCAGACTGCAACATTCCTTCATGTTTAGCTCCAAACAAGGCAAAGTCTCGAATTGTTGGGTTCAATAACAGGGAACCAGTTTTGTCAGACGATGATTTTCCAAAGTTTCAAATATGGGATCCTGCAGATGATATTGACATTTTGAATAATGAAGTTACACCGGTTTTCAATCACAATGAAAAGTATGTTGTACCTGATTCTTTTTCCCCAACTCCAGCCAAGCAAGCTATTAAAAAGTTGATTTCAACAAAGAATTTATCACAAACTTTGGAAGATAACATTGAAGACTGTGTGAATTGTTCTGATAATGAGGATAAAGAAAATGTTGATACTGCTCAACAATTCATAAAGCAAAACTCCATAAAAAAGTGGAACTCCCAAGTTCAGCTTAACACTACAAGGGTGTGTTCTGACTAA</cdnaseq>

Protein Sequence

<aaseq>MTITELVVERYAPSGHRTESRHRIGKGNMIKEFSKFDKKSKGVYGRRPLKDISSTCYKMIDTVASSDDVPKKHNNTSFFEMVDSSIPNMLPVDIKNKIHGLLVHYFGNEDDMADERPKKLLVDVLALLADASKSNADTNLSSEVDKLSKSCNPTDQNNDEKNDVTSAHSPKDNMDNDIDDNRNANNKEEIDNVHVAKIMKKLTKEGQEFVTPVNCNPDCNIPSCLAPNKAKSRIVGFNNREPVLSDDDFPKFQIWDPADDIDILNNEVTPVFNHNEKYVVPDSFSPTPAKQAIKKLISTKNLSQTLEDNIEDCVNCSDNEDKENVDTAQQFIKQNSIKKWNSQVQLNTTRVCSD</aaseq>

Gene Sequence

<dnaseqindica>1..79#493..590#673..937#1017..1087#1171..1273#1349..1408#1661..1872#1958..2029#2574..2630#3220..3267#ATGACGATCACAGAGCTTGTCGTCGAACGATATGCTCCTTCCGGGCATCGAACTGAATCACGCCACCGCATAGGAAAAGGTAACAGAAGTTATGATGGTATGCTAAATTGGAGGCCACCTATTAATAGCTGCATGATATTTCTCTATCCATCAGTTCATTTTTGTTTGGTTCAGATCTCATCAAGATTCGTGAAACTCAGGGAACCCTATCTCTTCTCCTCAAACTCTAGTCTGTTGCCGCAAATCATGCCCAATCCAATACGCCATGCCTCCATCTATAACGCCTCCTCCACCTCACCAACATCGCATTAGCAGCGGGGCAAGACTCGCATCCACACACACCTCCGCTTCCCTCCCTTCTTGTGCTCCTCCTCCGTGTGGGTGTCATCACCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCAGAAAGTTACCCTTAGACATTCCAAGGATCAATGTTNGGAAAGGCAATATGATCAAGGAATTTTCAAAATTTGATAAGAAATCTAAAGGTGTTTATGGCAGAAGACCATTGAAAGATATTTCATCAACTTGTTACAAAATGGTAATTTTCTGTTTTCAATATTAATGTAACTTTTTTCTTTTTTTTTCTGTTCCTTAATTTTTTTCCTACAATTTTGTTATAGATTGATACAGTTGCTTCCTCTGATGATGTTCCAAAGAAGCACAACAATACAAGCTTTTTTGAAATGGTCGATTCTTCAATTCCTAATATGTTGCCTGTTGACATTAAGAACAAAATACATGGGCTACTTGTTCATTATTTTGGTAATGAGGATGATATGGCTGATGAGAGACCCAAAAAACTACTTGTTGATGTGTTGGCTCTGTTAGCTGATGCAAGCAAGAGTAATGCTGACACAAATTTATCTTCTGAAGTCGACAAATTGTGTAAGTTTTATATCAAATTTGTACTTCATATGATCCTTTTTTTCCTGTTTGGATTTTAATTTCAAATTTATATTTTCAGCTAAAAGTTGCAATCCAACAGATCAAAACAATGATGAAAAAAATGATGTTACTTCTGCTCACAGTCCAAAGGTACCTTACTGTTTCATATTCATATTTTATTTGTAAAATTATTTAATTTGTCCTACATATCTTCCTACTTCTATTTCTTTTAGGACAATATGGACAATGATATTGATGATAACAGAAATGCAAACAATAAAGAGGAAATTGATAATGTACATGTTGCAAAAATAATGAAGAAGCTTACAAAAGAAGGTATTTTAATTCAATATTTTTTTTCTGTGCTTCTATTCTATGGTTAATTGTTTATGTTTATTTTGAATTTTAAAGGTCAAGAATTTGTTACTCCAGTAAACTGCAATCCAGACTGCAACATTCCTTCATGTTTAGGTAAATATTAACTTTTTCTAATTGTTTTCATTATATTCTTTGTGATTCTTTTTCTGTTTGTTTTATATTTTATATTTTATAGTTTGTTCTGTATACTCTTTCCCTTTTTATATGCTTCCATGCCTTGAAAAACGATTCATTCAACAAATGAGAAACGATTTGTTTATTTGTGTTTTCTGTAGACTTTAAATTTTATAATATGTTTGATAATTTATTTTTTTTCTATTTTTTTGTTTGGTAAATAACTTGAAGCTCCAAACAAGGCAAAGTCTCGAATTGTTGGGTTCAATAACAGGGAACCAGTTTTGTCAGACGATGATTTTCCAAAGTTTCAAATATGGGATCCTGCAGATGATATTGACATTTTGAATAATGAAGTTACACCGGTTTTCAATCACAATGAAAAGTATGTTGTACCTGATTCTTTTTCCCCAACTCCAGCCAAGCAAGCTATTAAAAAGTTGGTAAGTTATTTTATCATTGACACTTGTCCAATATTTTAGATATTGATTTTATTTTAATTGTTCTTAAATTTTTTTATTTTTATAGATTTCAACAAAGAATTTATCACAAACTTTGGAAGATAACATTGAAGACTGTGTGAATTGTTCTGATAATGAGGTATTGTTTTTCAATGTTTTTTTTACTTTCCTCAGACACTGAACTTTACACAAACGCAAGATGATTTCAAAGAAATTTGTGCTAACAAGGACTGTTTGAAGTTTTTTGTTGACTCTATATTAAGTTTCAAATTTAAAAAATATTTTTTCAGTGACACTTCACCATTTTTCTTTTCTCAGAAACTTGTAATGTGCACACTGGACTTTACACAAACTCAAGGTGATGGCAAGGAAATTTGTGCTAATAATATGTCAAGATGACTTTCTGATTGTTTCTCTTTATTTTGTCCCAAAAAGTTCAGTTATGATAGATTTGTTCCTGTTTACGTTTATTGTTTTCATGACATGTTATTATTTTTGTTTCTTTGGTTTTATTTTCTTTTTTTGTTGCTTCAGTGATTTAATAATATAATATGATTTTTTTTGTATCTTTGGTTATTGTATACTAATTGAACCTTTCATATTTCTGCTTTCTTTTTACTAAATATGTCTTTAAACTAGATTTACCCTTATGTTTGATTTTTTTCATTTAAATGATCAATCAGGATAAAGAAAATGTTGATACTGCTCAACAATTCATAAAGCAAAACTCCATAAAAAAGGTATGTACTGATTTATATATTGCTTCTTTTTAATTGTTTTTAAATGTTCAGTGCACAAAAAAATTAAAACTTGATTTTTACATTTCCATTTACAGGAATCTCCCGATTGTGTAATTCATGGAGAAAGAAAGTTTTCTGAAAAATGTGTTGATTTGAGTAATCAAGCAGACATTTTGTACAATAGGCTTAATAGAGTTGTGAAGATCGCTCCAGAAATTTGCAACGAATCATATAGAAGTCTAGGGAGAGTTCTTCTGTGTAATATGAGCAAATCAATTGGACATTATTCACAAAGTAAATCTCAAAAAGATCTGAGAAGAATTATCAATCCAGCAAAGTATTGCACTGATCCGTATACTCCTGAGAGGCAATCATTTCAAGTATCTCAATATCAAAAAGACATTTATACTGCTGTTTGTGAACTTTCAACAAGTAAAATCCATGAGTATGTTCTCTTCCTTTTTTTTAGTTACTATTTTTTATCTTGAAACTAAGTTATTTGTACCGTAAAATGTGTATCTGTGATGTCAACCTGTCACTTTATATATATACATGTCTGAATATTTGATATTAGTTTCATTTTGTGTAGTGGAACTCCCAAGTTCAGCTTAACACTACAAGGGTGTGTTCTGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016223