BGIOSGA016225

From RiceWiki
Revision as of 04:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016225| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016225, complete gene.| tag = OsI_155...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016225

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016225, complete gene.

LocusTag

OsI_15582

Ensembl Transcript ID

BGIOSGA016225-TA

Ensembl Protein ID

BGIOSGA016225-PA

Length

6207

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:15879056..15885262

Sequence Coding Region

15879056..15879211,15880199..15880303,15880588..15880740,15880952..15881050,15881139..15881267
,15881681..15881860,15881940..15882056,15884640..15884819,15884900..15885016
,15885098..15885262

Genome Context

<gbrowseImage1> name=IndicaChromosome04:15879056..15885262 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:15879056..15885262 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGTTGATCTCTGATCGCGTGTTCTCGCTCGTTCTCGGATTTGGCGGCGCGCAATTGCAGCTGGGCAGGAAGGTGGTGGATCTGGCTGAGCTGCGGAGGCTCGCGTGCCAGGGCGTGCCCGACGCCGCCGGCGTGCGCCCCGTCGTCTGGAAGCTTCTATTGGGATACTTGCCGACTGATCATGCGCTGTGGGCATATGAACTGGAGAAAAAGCGGTCCCAATACAGTGCTTTCAAAGACGAGCTTCTAGTTAATCCTTCAGAAGTTACTCGAAGAATGGAGGAAATGACTATATCCAAAGGGAACAGACATAATTCTGAAGGAACTGGAGTGCTTCCAAGGGCAGAAATTGTCCATGATGAACATCCTCTAAGCCTCGGGAAAACTAGTGTCTGGAACCAATTTTTCCAGGAATCTGAAACTATAGAGCAGATTGATAGAGATGTTAAGCGTACTCATCCTGAGATGCAATTTTTCAATGGGGATTCTTCTGATGCCTTGTCTAATCAAGAGTCGCTAAAGCGTATACTTACCATATTTGCAAAATTAAATCCGGGTATAAGATATGTACAAGGAATGAATGAAGTTTTGGCACCACTCTACTATGTTTTCAAGAATGATCCAGAAGAAAATAATGCTGAGTCAGCAGAGCCGGATGCATTTTTCTGTTTCGTTGAGCTGCTTAGTGGATTTCGGGATAACTTTTGCAAACAGCTTGACAACAGTGTGGTGGGCATACGCTCCACAATCAGCAAGTTATCCCAGCTCCTGAAAAGGCACGATGAAGAGCTATGGCGGCATTTAGAGGTTGTGACCAAGGTTAATCCACAGTTTTACGCATTCAGATGGATCACCTTGCTATTGACGCAGGAATTCAAGTTTCGCGACTGCATCCATATATGGGATGCACTGTTAGGTGATCCTGAGGGACCTCAGGAGTCAGCAGAGCCGGATGCATTTTTCTGTTTCGTTGAGCTGCTTAGTGGATTTCGGGATAACTTTTGCAAACAGCTTGACAACAGTGTGGTGGGCATACGCTCCACAATCAGCAAGTTATCCCAGCTCCTGAAAAGGCACGATGAAGAGCTCTGGCGGCATTTAGAGGTTGTGACCAAGGTTAATCCACAGTTTTACGCATTCAGATGGATCACCTTGCTATTGACGCAGGAATTCAATTTTCGCGACTGCATCCATATATGGGATGCACTGTTAGGTGATCCTGAGGGACCTCAGGCCACCTTACTTCGAATCTGTTGTGCTATGCTAATTCTTGTTCGAAGGCGGCTCTTGGCCGGGGATTTCACAGCAAACCTAAAGCTTCTCCAGAGCTATCCACCCACAAACATTGACCACCTCTTACATATCGCTAACAAACTGCGAGGGCCTATTCCCTACTGA</cdnaseq>

Protein Sequence

<aaseq>MVLISDRVFSLVLGFGGAQLQLGRKVVDLAELRRLACQGVPDAAGVRPVVWKLLLGYLPTDHALWAYELEKKRSQYSAFKDELLVNPSEVTRRMEEMTISKGNRHNSEGTGVLPRAEIVHDEHPLSLGKTSVWNQFFQESETIEQIDRDVKRTHPEMQFFNGDSSDALSNQESLKRILTIFAKLNPGIRYVQGMNEVLAPLYYVFKNDPEENNAESAEPDAFFCFVELLSGFRDNFCKQLDNSVVGIRSTISKLSQLLKRHDEELWRHLEVVTKVNPQFYAFRWITLLLTQEFKFRDCIHIWDALLGDPEGPQESAEPDAFFCFVELLSGFRDNFCKQLDNSVVGIRSTISKLSQLLKRHDEELWRHLEVVTKVNPQFYAFRWITLLLTQEFNFRDCIHIWDALLGDPEGPQATLLRICCAMLILVRRRLLAGDFTANLKLLQSYPPTNIDHLLHIANKLRGPIPY</aaseq>

Gene Sequence

<dnaseqindica>1..156#1144..1248#1533..1685#1897..1995#2084..2212#2626..2805#2885..3001#5585..5764#5845..5961#6043..6207#ATGGTGTTGATCTCTGATCGCGTGTTCTCGCTCGTTCTCGGATTTGGCGGCGCGCAATTGCAGCTGGGCAGGAAGGTGGTGGATCTGGCTGAGCTGCGGAGGCTCGCGTGCCAGGGCGTGCCCGACGCCGCCGGCGTGCGCCCCGTCGTCTGGAAGGTATGGTGGAATCGTCTTGCCTTCTTCTTATTTTACTACTCTTATTACTTCACTATACTTCACTGTGTGTCACCATGCTAGAGTAAAATGGGTATTACGAATACTAGGATTTCGCTTCGTCACAGCTCATGGATGCTGTCCTTGCATTGGATTCATTTGTTTTTTGGAAAGCCGTAGACAACCCATAAATGATGGAGTTTAGGATGGATGGGGATTTGGCGTGATTTGATTCGGATCAATCATATGGTTTGGTGTTGATACTTGATACATGGTTTATGCTGCGCGCAAGGATTAGGAGCATTTTTTTTTTACCTTGGTCTTTTGAGATATCATGGAGTGCGTTCGGGGAATGCGGTTTCAGTTATATCTATTCTGAAGTGAATGGGTCTCTAATCAAGTTTTTGTTTCATTGAAATGTTTGGATTTCTCTAGGTTCTTAAGATGTTTTATTCCCATACATTCAGTTTTTAAGGACCAAACTATACGATTGCCATGAGGCCATGATTCATAAAGATAAGTTCTTACTAGTTTCAGCAAACTGCTTTGAAGCCAGTGTTAGAATTTCATACGCTCTATAATTGTGCATTAGGATTACAAACAACTGCTCATGGCATTATTTTTGTTAGTTGAATAAATTTAGGAGAAATCAGGATTCGTTATTGACAAATAGAATATGATTTGTAGTTTGTAAATATGTATACAAGCATTTAGTGATTTGAGCAGAGCATTATTACACTGAAAGCCTTTCAGTATTTTTTGTGTTACATGTCATTGCACAACTTAATTTCAACTGACATAATTTTATATATGAAGAGAACTGTTGTAGTAGGATTAAGCTAAATGATATTATGGAATTCACTGCAAGAATTTTAGGTTAAATAGCTATGAATTGGACTAAATTTAGACTGGCTTACAATGTACAAATCCTTAATCTTTCTCCTTGTTTGCTACACTACAAATTTATTTGACTTGTTTGATAGTTAGCAGCTTCTATTGGGATACTTGCCGACTGATCATGCGCTGTGGGCATATGAACTGGAGAAAAAGCGGTCCCAATACAGTGCTTTCAAAGACGAGCTTCTAGTTAATCCTGTAAGTTCTTTATCCATATGATGATTTCAGTTCTGAACCATTGGCTGGTATGTGGTTACATTGTCTGTATTGATAGCAATTGTTAGCATTATGAGAGATGGACATACAAGTCAGAAACTATGCGCCCTGATTTAAAACTAGTAATTTAGACCAGAGAGTGATTCCACGGGGATATGCTAAAGTATTTTATTGTGGTACCAACTTGTTTTACATCTTAACAATTTCATTTGGTAGTTTTCTCCTTTTAAGAAAGATACATAATAATATGTTTTGGTTATGGTCAGTCAGAAGTTACTCGAAGAATGGAGGAAATGACTATATCCAAAGGGAACAGACATAATTCTGAAGGAACTGGAGTGCTTCCAAGGGCAGAAATTGTCCATGATGAACATCCTCTAAGCCTCGGGAAAACTAGTGTCTGGAACCAATTTTTCCAGGTAATGTTCACTAAATCGTAAATTTATGTACTGCCACATGTTAAGTCTGTATTTTGCTTTGGTTCAATTTGATGGTAGAACTTTCAACTCCTTGATATTGAGAGATCTCCCTTGGTCCCTTTGCAGCTCTTCGTTGAATTTTTGTAATGAATATATTGTACAGTATAGTGTTTGAGCTACTAAAAATATACACTGTTATTTGATACTTCAGGAATCTGAAACTATAGAGCAGATTGATAGAGATGTTAAGCGTACTCATCCTGAGATGCAATTTTTCAATGGGGATTCTTCTGATGCCTTGTCTAATCAAGTAAGCATTTATTATCTGATATGATGCCAGTTCTTTTTGTCTTTTGTAATGTCCAGTTAGGCTAAATGTGATATATGTTTGTCTTCAGGAGTCGCTAAAGCGTATACTTACCATATTTGCAAAATTAAATCCGGGTATAAGATATGTACAAGGAATGAATGAAGTTTTGGCACCACTCTACTATGTTTTCAAGAATGATCCAGAAGAAAATAATGCTGTAAGTGTTTTTTTTTCCCATGACGCTATTTGCTTAAAATTGTTGAACGTTGGTTCGTATGTAAGATCCTTGGCTTTAAGGCTTAAATATGTGGTAGATTTCTTCTATACAGATTTCCTGAATTCATTCACTGGTAAGTGGTTCCCTGCCTGTTGGAACCATGTATCATGTACTTTATCTGACTTTGGTATACTGCCTAAGTGACTATTATTCATTCTTTTTTCTTCTGAAGTTACCAAAGTAGAAACATTTCACTACTATTGTTAGATAGCTTTACCATGTACCTTATTTTTTATTATGCAAGTATGGCTGTTAGATGGGTGATGACCGGAGAGAAACAATGATGTTATCTATAGAATATAAGCATCGGCTAACTCTGTGCCCATACACCTTTTAATTTCTTATGTAAACAGGAGTCAGCAGAGCCGGATGCATTTTTCTGTTTCGTTGAGCTGCTTAGTGGATTTCGGGATAACTTTTGCAAACAGCTTGACAACAGTGTGGTGGGCATACGCTCCACAATCAGCAAGTTATCCCAGCTCCTGAAAAGGCACGATGAAGAGCTATGGCGGCATTTAGAGGTTGTGACCAAGGTATGCATTTCAATAACTTTTTTCTTGTTACATTTTACAGTGTATTTCTGCTCCTACTCTAACGCTTTGTATATTCCAGGTTAATCCACAGTTTTACGCATTCAGATGGATCACCTTGCTATTGACGCAGGAATTCAAGTTTCGCGACTGCATCCATATATGGGATGCACTGTTAGGTGATCCTGAGGGACCTCAGGTTAGAAACTGCCATTCCTAGTTCCATGCCATCTGAGAAATTTTTGAAATGCACTATAAAACTCTTATTATCTTATTGCAGGCCACCTTACTTCGAATCTGTTGTGCTATGCTATTTCTTGTTCGAAGGCGGCTCTTGGCCGGGGATTTCACGGCAAACCTAAAGCTTCTCCAGAGCTATCCACCCACAAACATTGACCACCTCTTACATATCGCTAACAAACTGCGAGGGCCTATTCCGTACTGATTGATTATCTTTTGTTTCTCATGTTTGTTCTTATATGTTAGTTTGCAATGTTCAAATATGTTGCATTTGAATGTTTGTAAATGATTCTCCCATGCCCTATGTGATTGGATGGTTGATTTGAACCATCGGTTCTCATATAGAGTGGAGTATACCTTTTGGAGCATACTGCTTGTCTTCTTGATAGTTGGTATTAGTTGTCAGACACTAATTTAGGTCACATAGACGCCTTTTCTATAGATGTTATTAACGAATACGCTCTTTTTGGATGTCTTGCGAGATCCCAGCTAAAGCAAACGACCAGCGGACAAGCATCCTATCTCCTTTTCTAGTCTAGATAAAAAGGAATGAACGCATCATATCTCCTTTCCTAGATAAAAAGGAAAAAAAAAAGAGCTTATGCCCCCATTCATTCCTGATTAAGATAGTTTCTGATTAAGATGTATATCCAATTATGATTTTCGTTTAAATTACTAAAGATGTCTTCTCTAAAACATTTTATCATGTTCTAAAATATTAGATTAATCAATTTTTAATATAAAATAATTAAAAATCAATTAATGATATCATACACTAATAGTTTTCTCGTTTTCTCCTTTTATGTGTCTAACACGTCCTCCGTCCCAAAATATAAGTATTTTTAGTTATGAATCTAGATATACAGTTATCTAAATTAATAGTCTAAAAGTTGTTATATTTTAGGTCGGAGGTGGTAATCTTCATCACATTACAACCGAACGGGGCCGAGTGATAAGAATAATAACAAAAAAGTTTACCAAAAAGGAGAGAAGTTTCCAGGTTCTTGGGCAAATTAGATATATATCAAACAAGTGGAGTGCTGTTTCAGGAAACGAACTATCATTTTCTCGCAAGAGCAACACAAAAGGGCTTTACCACTGGCATTACAAGTTATAACTTAACAAAGAGACATGAATAATGAATCTGATTAGGCAAAAATATGGTTTCTTGATATAGCAAGTTCTCAAGTTGTAACAAATATTTCTATCTTATAAGTTGATAAATAAATGCCGATGCTGTTCTCTACACTCCCTGTGCCGTGCCAGACCAGATCATATCACTCCACCAATGCAAGGAAATAATACTCTTCAAGGGGCTCTCGAACATAAACAACCCAAGAGTCAGCAGAAAGTCCACCTAATGTTGGGGAAGGCCAAAACATTAGCTATCAACAACAGCAGATCAGCTTCTTTCTTGGTAGACCAAAAAACTTGTGTAAGCAGAATGCCGACACCGGTTAAGGCCCAATGCGAGTTCTCACAGAGCTCCAAACCAAAATTATTGCTACCACTGGAGGCCGTGATATGCTGGCAAAATTCATCAGGAGTACGCAGCTATGATTCTCTAACATATAAGGGATACTGATGTTCAAACAGAAGCTTTTGTCAGCCACTAGCCACAAAAAGTACTTGCGCCGGTACTATGTTGTTCTACTCAGCGCCTTTCTTGCTCCGGAAATTCTTTTGCATCTCTGCAACCTTTTTCTTGCACTGCACCATGGTTTTACCTGGGACAGCGGCAGCCACACGCTCCCATCTTTGGCTTGCATCCTTAGGGAATGCCTTCAAAGCTTGTACAAGAGCCAGCACTTGCGCCTCTGACCAAGCCTCTGGATCTGCTGTTCCAGAAGGTGTTCCATTTGATACAGGAGCAGGAGCAGGAGCTTTCTCGTCAGATGTTTTACTGCTTGCAGGTTGTGCAGGCGCTTTGGATGATGCATCTCCAGATGCTTTCTCAGTAGGCAAACCAACTGTTTCAGTTCTTACAGAAAGAGGTGATGCAATGGATGGTGCCGGCTTGCGTTTCTCGAGGAAAGAGTCAAAAGCTTTGGTAGAGTCCGGTTTCTGCAAAAGAACAGTCTTCGTAGCCTTCAGAATCTCTTCAACAGATCTTCCAGTTCCAATAAACTCTGAGACAACCTCCCATCTCCGGGAGGTTCCTTTTGGATACTTTTGTATTGCTTTCCTAAGCAACTCAATCTCTTCCCTTCCCCATGGTTTCTCTTCTTTCTTCTCATAGTTGCTTAGTGTATTGCCTTGCGTGACCTTTTCACCTGAAGAGGTGGATTTTGCTTTGGAACCATCCACACCATTTGCCTGAATTTTCTTTCCTTCATTTGAACTACCAGACGAACCTTCTTTGCTCAGTGCACCTCTAAGCAATCTGGCCTTTTCAGTTGTATCTTTGTTCCCCCTGCTATCACAGAGCTTCTTCAATCGTTCCATATCAAGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGTGCCCATACACCTTTTAATTTCTTATGTAAACAGGAGTCAGCAGAGCCGGATGCATTTTTCTGTTTCGTTGAGCTGCTTAGTGGATTTCGGGATAACTTTTGCAAACAGCTTGACAACAGTGTGGTGGGCATACGCTCCACAATCAGCAAGTTATCCCAGCTCCTGAAAAGGCACGATGAAGAGCTCTGGCGGCATTTAGAGGTTGTGACCAAGGTATGCATTTCAATAACTTTTTTCTTGTTACATTTTTACAGTGTATTTCTGCTCCTACTCTAATGCTTTGTATATTCCAGGTTAATCCACAGTTTTACGCATTCAGATGGATCACCTTGCTATTGACGCAGGAATTCAATTTTCGCGACTGCATCCATATATGGGATGCACTGTTAGGTGATCCTGAGGGACCTCAGGTTAGAAACTGCCATTCCTAGTTCCATGCCATCTGAGAATTTTTTGAAATGCACTATAAAACTCTTATTATCTTATTGCAGGCCACCTTACTTCGAATCTGTTGTGCTATGCTAATTCTTGTTCGAAGGCGGCTCTTGGCCGGGGATTTCACAGCAAACCTAAAGCTTCTCCAGAGCTATCCACCCACAAACATTGACCACCTCTTACATATCGCTAACAAACTGCGAGGGCCTATTCCCTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016225

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016225&oldid=65119"