BGIOSGA016249

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Revision as of 04:26, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016249| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016249, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016249

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016249, complete gene.

LocusTag

OSJNBA0072D21.5

Ensembl Transcript ID

BGIOSGA016249-TA

Ensembl Protein ID

BGIOSGA016249-PA

Length

3872

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16268584..16272455

Sequence Coding Region

16268584..16268958,16269705..16269749,16270222..16270336,16270691..16270760,16270843..16270891
,16271366..16271463,16272030..16272168,16272306..16272455

Genome Context

<gbrowseImage1> name=IndicaChromosome04:16268584..16272455 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:16268584..16272455 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATGGCGACCCCCGCCGCCTCCGCCACCCTCACCCTCCTCCTCCCCGCCTCGCCGCCAATGCGGCTGCGCGCGCGGCGGCCGCCGGCAAGGACGAGCAGGAGCAGGCCCCTCCTCCTCCGCGCGTCGTGCGCCTACGCGCTCCGGGAGGGGCAGTCGCAGCGGTTCCACCGCCTGCCCTGCGGCCTCGACCTCGAGGTTATCGCCCAGCAGCCGCCTGCCCCGGCCACGGGCGGTGGCGGCGCCGCCGCGAGGCCGCCGCTGGTGTTCGTGCACGGGAGCTTCCACGCGGCGTGGTGCTGGGCGGAGCACTGGCTCCCCTTCTTCTCCCGCGCCGGGTTCCCCTGCTACGCGCTCAGCCTCCGCGCCCAGGGTGAAAGTAGCGTTCCGCCAGAAAAAGTGGCTGGCACACTTGAGACGCATACTGGCGATATTGCTGATTTCATCCGGAAGGAGGTTTCCCTGCCACCTGTATTGATTGGACATTCATTTGGAGGCTTGATTGTGCAGCAATATATATCTTGTTTGGGAGGTTCAGAACTTCTGCATCCAAAGCTTGCTGGTGCTGTTCTTGTATGCTCTGTGCCTCCCTCAGGAAATAGTGGGTTGGTGTGGCGTTACCTTTTGACCAAACCAGTTGCTGCCATCAAGGTGACACTCAGCTTGGCTGCAAAACGATTTGCAAATTCGTTGTCCCTCTGTAAGGAAACATTTTTCTCGCCAGAGATGGATGATGACCTGGTCCAAAGGTACCAAGGGCTAATGAAGGACAGCTCAAAGTTACCACTATTTGACCTAAGGAAGCTCAATGCATCATTGCCTGTAGCTTCTGTGCCAAATAATACAGTAAACATCCTCGTTGTGGGCGCCAGCAGTGACTTCATTGTTGATGCTGAAGGGCTTTCAGAAACTGCAAGATTTTATAATGTGCAACCAGTCTGCATCGAAGGGATAGCCCATGATATGATGCTTGATTGCTCGTGGGATAAAGGAGCTGGGATTATCTTGTCATGGCTGGAGAAACTTACACCAAGATAA</cdnaseq>

Protein Sequence

<aaseq>MAMATPAASATLTLLLPASPPMRLRARRPPARTSRSRPLLLRASCAYALREGQSQRFHRLPCGLDLEVIAQQPPAPATGGGGAAARPPLVFVHGSFHAAWCWAEHWLPFFSRAGFPCYALSLRAQGESSVPPEKVAGTLETHTGDIADFIRKEVSLPPVLIGHSFGGLIVQQYISCLGGSELLHPKLAGAVLVCSVPPSGNSGLVWRYLLTKPVAAIKVTLSLAAKRFANSLSLCKETFFSPEMDDDLVQRYQGLMKDSSKLPLFDLRKLNASLPVASVPNNTVNILVVGASSDFIVDAEGLSETARFYNVQPVCIEGIAHDMMLDCSWDKGAGIILSWLEKLTPR</aaseq>

Gene Sequence

<dnaseqindica>1..375#1122..1166#1639..1753#2108..2177#2260..2308#2783..2880#3447..3585#3723..3872#ATGGCCATGGCGACCCCCGCCGCCTCCGCCACCCTCACCCTCCTCCTCCCCGCCTCGCCGCCAATGCGGCTGCGCGCGCGGCGGCCGCCGGCAAGGACGAGCAGGAGCAGGCCCCTCCTCCTCCGCGCGTCGTGCGCCTACGCGCTCCGGGAGGGGCAGTCGCAGCGGTTCCACCGCCTGCCCTGCGGCCTCGACCTCGAGGTTATCGCCCAGCAGCCGCCTGCCCCGGCCACGGGCGGTGGCGGCGCCGCCGCGAGGCCGCCGCTGGTGTTCGTGCACGGGAGCTTCCACGCGGCGTGGTGCTGGGCGGAGCACTGGCTCCCCTTCTTCTCCCGCGCCGGGTTCCCCTGCTACGCGCTCAGCCTCCGCGCCCAGGTCAGGTGGAGTCACTTGTGTACACCCCGCGAAGTGTTTGTTGAAATGTCTTAATGGGGAGGAGGATCATTGCTTCATGGCCCTCATGGCTGTGGTGTTGGACTATTTTACTTCTAGCCATTCTAGGCGCTGGCAGAAACACGCGTATCTCCGTCTCCTAAACCGAAAGTTAAAAACATTTGACAAAAAAATAATAATCCTATTGATTGATCGTTTTACGGTTTGAGAACAGAAAACCTAGACAACGGTATCCCGTTGGAATAGGATACCTTTCTATGAGACAATACCTAATACGTGATACCTATTGTGGTACCAGCTGCATGGTACCCGATACCTGTTACCCGGTACATATGATATCTAGGACCTGATACCTGTGATACTCGTGTAAGAGAATAGTTAATATGTATATCCCGTTGCAACGGGATCCCGTTTTGTAGCAGCGCTCTTTTAGAATGCCTATATATTAGCCAAGCCAAGTAAAACAGCGTGGCATCACTCACATTTCAGTTAAAAAAATGCAGTTTATGCAACTATGGGGTCTATGTGTGTGCACTTTAATCTTAAGGATATGAATCATAGCGTGTCTGTTGCTGCCCAGTCTTGATACTGCTCTCTGCTCTGTCGAGTCTAGAGCATTCGACACTTTCAGTTTTTGAGTAATGACTGATCGCATGTCTTGATTTTTGATTGTCCGACTGTTTTTCCTTGGTATGTAATGCTTCATTGACTTGGTTGTGCTGTTGCAGGGTGAAAGTAGCGTTCCGCCAGAAAAAGTGGCTGGCACACTTGAGGTAATTCTGAGAAACATAATCGGACTGAATTCTCCAACTCTGAAATATTGCTATGTGTTATGTACTAGATGGTTAATGTTGATGCATGCCATTTGAGGATTTTTCTACTCCTCTGGGTGGCAATTGGGGATTTGCCACTCATGTGTCTATTGACTTGTGGGACCAGGACACACTTGTCAATGGGATAGGGTGGCAAACTGGCAAATCCTCGTTTTCCACCACCTTTGGAGTAACTTTGATATATATAAGATATATGATTAATTTCAGCTGACCTTTCATTAGATGTTTTTTGTTTATTATAAATATCATATGAAATAAATATATTAGGAGATATCAAGCTAGTACATTCAGCAGAGTTGCATAGATGTGTCACTTGAGAAAATTAGTATGTTGTAACAAATATTTTTTTATTAGGGTATTCCATTTCACCATCTCAATATAGTTGGTCCAATATTAAATTAACTTGCAGTAGACGCATACTGGCGATATTGCTGATTTCATCCGGAAGGAGGTTTCCCTGCCACCTGTATTGATTGGACATTCATTTGGAGGCTTGATTGTGCAGCAATATATATCTTGTTTGGGAGGTATGCCCTCTCAATGATCGGAAAAATTCCTGTAACCTATGTATTAAACCTGGTGATTCTTTGTGTTCTTAATATTTTTCAGTTCTTCTTAACTGAATTTTCATCATCAAGAGCCTTAAAAGTTCCAATCACATAGATATGCCAAACTGCCAATTACTATAAGGTTTCTCAATGGATTCTTGATTACTTAAATTAGTAATAAAAAATGTGAGTTATTCTGTGAACTGAAGGGAATGAGTGGTAGTGGTACTGGTACCTATGTTCTGATGTAGCAGCTTATGGTCTGAGCTTGTGGCAGTAATAGTCGTTTTATTTCATGCAAAAGTTAATCATTATTAACTTTTTTATTCCAAGGTTCAGAACTTCTGCATCCAAAGCTTGCTGGTGCTGTTCTTGTATGCTCTGTGCCTCCCTCAGGAAATAGGTATTTCTCATCTAACTCACTGCAATGTTACATCTTTGTCTTACATAACTGGGTTTAACTCCTTTGTGTTATCTATCTACAGTGGGTTGGTGTGGCGTTACCTTTTGACCAAACCAGTTGCTGCCATCAAGGTAAATTAACCTGATCTTTATCACTTGGCTCTCTTGAAATTCCATTCATTTTATCCTCTCGTGGAATTATGCTGAAACATTTATCCATTCCTGCCAATCACCTTTTTTTTATATATTTAAACTTCCTGCCAGTCACTTAACTACTTATACTACTATGCAACATGTGTCCTCCTTGTTGTTCAAGGAAATATAAGCAACCTATAATTAGATAAACTTTGTCATATTAATGTGGTTGGTTTGGCTATGTAGTACCATGCTTACGTCTTGCTGGTAATCTGTTCACCTTGTTTCATAGCTTTGAACCCCTGATTCATCATTCCATTTTACAAATTATTATGTTAATAAGCAGTCGACTGCTATTGATATCACAATTATGGTCATCCACACCCAGAAGTGTATATGCCTCCTCATGCTGTTTGCAATTCCTTTATGCATTGTTGATGATATGTGAAATCTTAAGCATCTTTGAATCAGGTGACACTCAGCTTGGCTGCAAAACGATTTGCAAATTCGTTGTCCCTCTGTAAGGAAACATTTTTCTCGCCAGAGATGGATGATGACCTGGTCCAAAGGTATTCTTCATAGTAAATGACTTCATCTTTGTAAATTTAGGCCATATACCTGGAGGGAATCTTTTATATGGGTGGTAATGTACTAGTGAATTGGTCATTAGTCATTACTTGGTACTATCTCCGTTTCAGGTTATAAGACTTTCTAGTATTGCACATATTTATATAGATGTTAATGAATCTAGACACGCATATATGTCTAGATTCATTAACATATATATGAATGTGGGCAATGCTAGAAAGTCTTATAATATGAAACAGAGGAAGTAGTTGTTATTACTGTCACCTGAACTGGTTAACCTGGTATTTTATTATAATGACTTTTAGATGGATTAAAAAAGAATCAATAAATTAGAATCTGAACTAGGTGATCTTTTAGTTTGGTCCATTCTATAACATGCAAACATTGTTTTGGTGTATTGGCAGCGATAAGCAACCATCAATCCCCTGCCATCTGCTTAGTTACACACCAAAGATCCAGTTATAATGACATCTATGGAAGAGCTTCTACATTTGAAATGTGTTTTTTTTTTCAATAATGACATATTATCTATGTCAATATCTTGAAGGTACCAAGGGCTAATGAAGGACAGCTCAAAGTTACCACTATTTGACCTAAGGAAGCTCAATGCATCATTGCCTGTAGCTTCTGTGCCAAATAATACAGTAAACATCCTCGTTGTGGGCGCCAGCAGTGACTTCATTGTTGTAAGGGACACACGCACCCCCCCCCCCAAAAAAAAAAACTCTCTTTCTCTCTGTAGATACCGTATTTATTTCTTTACAGTTGTATAGTGTAAACTTGTTTGCATTCCACCTTGACTGTTTCATTTTCCTTGATTTAGGATGCTGAAGGGCTTTCAGAAACTGCAAGATTTTATAATGTGCAACCAGTCTGCATCGAAGGGATAGCCCATGATATGATGCTTGATTGCTCGTGGGATAAAGGAGCTGGGATTATCTTGTCATGGCTGGAGAAACTTACACCAAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016249