BGIOSGA016283

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Revision as of 04:27, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016283| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016283, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA016283

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016283, complete gene.

LocusTag

OSIGBA0132D06.2

Ensembl Transcript ID

BGIOSGA016283-TA

Ensembl Protein ID

BGIOSGA016283-PA

Length

4182

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:16812826..16817007

Sequence Coding Region

16812826..16813195,16813869..16814041,16814180..16814277,16814947..16815084,16815243..16815432
,16815853..16815985,16816073..16817007

Genome Context

<gbrowseImage1> name=IndicaChromosome04:16812826..16817007 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:16812826..16817007 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTCGGTGGCGGACGATGCGGAGATCACCGGCCCGCTCCTCGCCGGCGGCGGCGGCGGCGGCGGTGACAGCGCCGCGGCGGCGGGGGTGGAGAGGGTGCCGGCGTGGAGGGAGCAGGTGACGGTGCGGGGGATCGTGGTGAGCGCGGTGCTGGGCGTGCTGTTCTGCCTCATCACGCACAAGCTGAACCTCACGGTGGGGGTGATCCCGTCGCTCAACGTCTCGGCGGGGCTGCTCGGGTACTTCCTGGTGCGGTCGTGGACGGCGGTGCTCGGGAGGCTAGGGTTCGTCATCGCGCCCTTCACCAAGCAGGAGAACACCGTCATCCAGACCTGCGTCGTCGCCTGCTACGGCCTCGCCTTCAGCGGGGGTTTTGGGTCATATATGCTTGCAATGGATCAGAAAACATACGAACTTATTGGGCCAGATTATCCTGGTAACAGGGCGATCGATGTTATGAATCCTTCATTGGGTTGGATGATCGGGTTCATGTTTGTTGTTAGCTTCCTTGGACTATTTAGTCTTGTTGCACTGCGCAAGGTAATGGTGATTGATTACAAGTTGACCTATCCCAGTGGAACTGCGACAGCTATGTTGATAAATAGCTTCCACACTACCAGTGGAGCAGAGCTTGCAGAAAAGCAAGTTAGCTGTCTCGGAAAGTATTTGAGCATTAGTTTTTTCTGGAACTGCTTCAAGTGGTTCTTCAGCGGCGTTGGGGATTCTTGTGGTTTTGACAATTTCCCATCTCTGGGACTTGCAGCATTTAAGAACACGTTTTATTTTGATTTCAGTCCAACCTATATTGGATGTGGTCTTATATGCCCACATATTGTTAACTGCTCTACACTTCTTGGAGCAATCATATCTTGGGGTTTCCTCTGGCCATATATATCTACAAAAGCTGGGGACTGGTATCCAGCTAACCTAGGAAGCAATGATTTCAAAGGGCTATACGGATACAAGGTTTTTATATCTGTATCTGTGATACTTGGTGATGGTCTTTATAACCTCATCAAGATCATCTATGCTACTATCAAGGAAGTAATGAATGCACGGTCGAAGCAAGGAAGACTTCCCCTTGTGCGGGTTCACGATGATGATGAAGGCTCTAAATTATCAGCTGAAGAAAAGCTTCGGAATGACACGTTTCTAAAAGACAGAATTCCATCATGGTTAGCAGGATCAGGTTATGTTGGCCTTGCAGCAATCTCAACAGCAACTGTGCCAATGATCTTCCCGCAGGTCAAGTGGTACCTTGTCCTGTGTGCCTATGTTGTAGCTCCCCTGCTCGCCTTCTGCAACTCATACGGCTGTGGCCTCACAGACTGGAACCTTGCGTCCACGTATGGAAAGATTGGCCTTTTTATTTTTGCCTCCTTGGTTGGCCGAAGCGGTGGCGTGATTGCTGGCCTAGCAGCTTGCGGTGTTATGATGTCCATCGTATCCACCGCTGCCGATCTCATGCAGGACTTCAGGACTGGTTACCTGACCCTCTCTTCACCAAGGTCCATGTTTGTGTCACAGTTGATTGGGACCACCCTTGGCTGCATCATCGCCCCTCTGACCTTTTGGCTCTACTGGACTGCTTTCGATATCGGCAATCCTGATGGCATGTTCAAGGCTCCATATGCCGTCATCTACCGTGAGATGTCAATCCTGGGTGTCGAAGGATTCTCAGCGCTGCCCCAACATTGCCTGGCGATCTGCTTGGTCTTCTTTGTCGTAGCTATTTTGATCAACCTCCTGCGGGACGTCACTCCGAAGAGCGTCTCCAAGTTCATCCCGCTCCCGATGGCTATGGCTGTCCCATTCTACATTGGGGCGTACTTTGCGATCGACATGTTCGTTGGGACGGTTATCCTGTTTGTCTGGGAGAGGGTGAACCGCAAGGAATCTGAGGACTTTGCAGGCGCGATTGCATCTGGTTTGATCTGCGGTGATGGGATCTGGAGTGTTCCATCTGCGATATTGTCCATCATGAGGATTGACCCACCAATGTGCATGTACTTCAAGCCATCCCTTACCAGCTGA</cdnaseq>

Protein Sequence

<aaseq>MGSVADDAEITGPLLAGGGGGGGDSAAAAGVERVPAWREQVTVRGIVVSAVLGVLFCLITHKLNLTVGVIPSLNVSAGLLGYFLVRSWTAVLGRLGFVIAPFTKQENTVIQTCVVACYGLAFSGGFGSYMLAMDQKTYELIGPDYPGNRAIDVMNPSLGWMIGFMFVVSFLGLFSLVALRKVMVIDYKLTYPSGTATAMLINSFHTTSGAELAEKQVSCLGKYLSISFFWNCFKWFFSGVGDSCGFDNFPSLGLAAFKNTFYFDFSPTYIGCGLICPHIVNCSTLLGAIISWGFLWPYISTKAGDWYPANLGSNDFKGLYGYKVFISVSVILGDGLYNLIKIIYATIKEVMNARSKQGRLPLVRVHDDDEGSKLSAEEKLRNDTFLKDRIPSWLAGSGYVGLAAISTATVPMIFPQVKWYLVLCAYVVAPLLAFCNSYGCGLTDWNLASTYGKIGLFIFASLVGRSGGVIAGLAACGVMMSIVSTAADLMQDFRTGYLTLSSPRSMFVSQLIGTTLGCIIAPLTFWLYWTAFDIGNPDGMFKAPYAVIYREMSILGVEGFSALPQHCLAICLVFFVVAILINLLRDVTPKSVSKFIPLPMAMAVPFYIGAYFAIDMFVGTVILFVWERVNRKESEDFAGAIASGLICGDGIWSVPSAILSIMRIDPPMCMYFKPSLTS</aaseq>

Gene Sequence

<dnaseqindica>1..370#1044..1216#1355..1452#2122..2259#2418..2607#3028..3160#3248..4182#ATGGGCTCGGTGGCGGACGATGCGGAGATCACCGGCCCGCTCCTCGCCGGCGGCGGCGGCGGCGGCGGTGACAGCGCCGCGGCGGCGGGGGTGGAGAGGGTGCCGGCGTGGAGGGAGCAGGTGACGGTGCGGGGGATCGTGGTGAGCGCGGTGCTGGGCGTGCTGTTCTGCCTCATCACGCACAAGCTGAACCTCACGGTGGGGGTGATCCCGTCGCTCAACGTCTCGGCGGGGCTGCTCGGGTACTTCCTGGTGCGGTCGTGGACGGCGGTGCTCGGGAGGCTAGGGTTCGTCATCGCGCCCTTCACCAAGCAGGAGAACACCGTCATCCAGACCTGCGTCGTCGCCTGCTACGGCCTCGCCTTCAGCGGTATGTGCGTGCGCGGGAGAGGGAGAGGGGAATCTTGGGCTTTGCTTGTCTACTAGGTGGAGGAGATGCGATTCTGGGTCTCACTTTTGACCGTCCAAGCTGTCGTGCCGTGGTTGGAGAAACGAGATGCTCCCCTTTTATTTTTTAGTTAGTTCTAGAATTCGATGAACATGATTAGTATTACTGATTAGTACTACTAATCCCCTTTTGATTTTAGTTAGTAGTACTGATTAGTATTATGTGGGATTATGACGTTTGTGTGTTGAATTTGGGTGCTAGAGTTTTAGAGGTTCTATAAAGGTCGGACTTCGCTTCTCATCATGTTTTAGTTTTGACTGTTTGAGGGACCAAAATGTTACTAGTATTAATATGTGTTCTGCTTCATGGATTTTCTTCTGCTATAACCTGTTAGCGTGATTAGAGTACATCGAGTCATCAAATAGTGATATAACATGACAAGGCATAGTATTTTTGTTTCACTTTACCAGTTTATGAATGTTATTCTCGGGGATCAAGTTGTGATTCATTTGTGTGGGTGGTATATATTCAGAGGGAAATTCTAAGTTTCGCACCATAAATTTCTGACATTGGTGCTTCACTGCAGTATTGGCCACTATAGTTGATCCTTTCATGTTGAGTTCAGATTATCATTGCTATTTCTATGTTGATGCAGGGGGTTTTGGGTCATATATGCTTGCAATGGATCAGAAAACATACGAACTTATTGGGCCAGATTATCCTGGTAACAGGGCGATCGATGTTATGAATCCTTCATTGGGTTGGATGATCGGGTTCATGTTTGTTGTTAGCTTCCTTGGACTATTTAGTCTTGTTGCACTGCGCAAGGTATTCATTTATATCTTGGAATCACACATCATCCATTATGTTTATCTAAATAGATGTTCTTTTTAATGTACTAGAGTAACTTGGGCAGTTCTTTGTCTAATTAATGCTATAACTAAAGTCTGTTTTGGTGCTTGTTAGGTAATGGTGATTGATTACAAGTTGACCTATCCCAGTGGAACTGCGACAGCTATGTTGATAAATAGCTTCCACACTACCAGTGGAGCAGAGCTTGCAGAGTAAGATATAGATAAGCATTGTTCTTAAATTTTGTACAGTATAGATGTGATGCACATGCACATGAAGATATTAGACGTGCAGTGCAGTGCAGGCACTCTCATTTGTTCAATTTGTAATTTTTTTACTATGTCTATAACATATTATAAAGGATTCCTCACCTTGTCATGACCGTATTGATGGCTTTAGGATGTCAATATGGTAACACTGAATAATAAAAAGAATGATTGCTACGTGCTTGTACTGTTTATAAAAGACAGCCCATCTTTTACCATCGATTATCTATTTTTAGTGGCATCTCCGAACCATCAGCTGGCCATCTTTCAATTCTGTGATAGCCATTTAAATCTAATTGATCTTCTTTATATGTATAAACGTCAATAACTTCCCGTGTAACAAAAAAAAAGCTTCTGTCCAATAGGTACCTTTTCCATCTATACTGAATTTTTGTGTCAATATGATTATGCGATGAATTAGCAAGTGTTAATCACAAGGGTTTATATGTTTATCTACTTATCTGCCAGTTACTTCCTTCTGCAATAAATTTGTAAATAAAGCATACTCTTTGGACCTGAAGATCTTAAATAAAGTTCATCCCCACTAGTTGATAATAGAATTTTCAGTTGCTGCAATTTGTAAGTTTTAACCAAACTGCTTCTCTATGGTTGCAGAAAGCAAGTTAGCTGTCTCGGAAAGTATTTGAGCATTAGTTTTTTCTGGAACTGCTTCAAGTGGTTCTTCAGCGGCGTTGGGGATTCTTGTGGTTTTGACAATTTCCCATCTCTGGGACTTGCAGCATTTAAGAACACGTAAGTTTTCAGTTCTATGTTTTGCTATTTTTCATAAATTCACAAGTGGTGGCTGTAGTAACTTAGTATATTTCGTATCGTCAAATGAAACAGCTTGTCTCTTCAACTGGTACTATGCATTTTACATACAGAAAACTTACCTGTTTCCACTTTTGTAGGTTTTATTTTGATTTCAGTCCAACCTATATTGGATGTGGTCTTATATGCCCACATATTGTTAACTGCTCTACACTTCTTGGAGCAATCATATCTTGGGGTTTCCTCTGGCCATATATATCTACAAAAGCTGGGGACTGGTATCCAGCTAACCTAGGAAGCAATGATTTCAAAGGGCTATACGGATACAAGGTATTTTGACATAAGCTATTCACCTTTTTCATGTCATGTATTTTATTCATCGACAATCATCTGTGCATCTTGACAATCCATCAAACCGTCCTTTCTCTTGAGATTTAGAATGAAATTGTGTATAAAAAATCCCATAAACGAAAATCACCTTTTACCTCTCCATGCTTAACAAACCCACTAAATCTGAACAACTGGAAGCTACTGTTGTGAACATGAGAATTGCATTTATGGGTGGACATAGTGATCGGCAATTTTGTTAAATGCGGGCAAAGATTGGAGTTATTGGGAAAAAAAATGTCCATACTGAATAACATACAGATGGTACACCGAGCTTTGAAAAACTGTTCTTGGGGTTCACATACTGTATCAGTCCTTGCATCTTCTTCCTCAGCAACTGCTAATTCTGTTCCTGCTTTCCAGGTTTTTATATCTGTATCTGTGATACTTGGTGATGGTCTTTATAACCTCATCAAGATCATCTATGCTACTATCAAGGAAGTAATGAATGCACGGTCGAAGCAAGGAAGACTTCCCCTTGTGCGGGTTCACGATGGTAAGGCAATATTCTTACTGTATGGTGCACATCTACCAACAAATGACGTACCATTAATCTGATTTTTCTTTTATTTCATTCTTTCAGATGATGAAGGCTCTAAATTATCAGCTGAAGAAAAGCTTCGGAATGACACGTTTCTAAAAGACAGAATTCCATCATGGTTAGCAGGATCAGGTTATGTTGGCCTTGCAGCAATCTCAACAGCAACTGTGCCAATGATCTTCCCGCAGGTCAAGTGGTACCTTGTCCTGTGTGCCTATGTTGTAGCTCCCCTGCTCGCCTTCTGCAACTCATACGGCTGTGGCCTCACAGACTGGAACCTTGCGTCCACGTATGGAAAGATTGGCCTTTTTATTTTTGCCTCCTTGGTTGGCCGAAGCGGTGGCGTGATTGCTGGCCTAGCAGCTTGCGGTGTTATGATGTCCATCGTATCCACCGCTGCCGATCTCATGCAGGACTTCAGGACTGGTTACCTGACCCTCTCTTCACCAAGGTCCATGTTTGTGTCACAGTTGATTGGGACCACCCTTGGCTGCATCATCGCCCCTCTGACCTTTTGGCTCTACTGGACTGCTTTCGATATCGGCAATCCTGATGGCATGTTCAAGGCTCCATATGCCGTCATCTACCGTGAGATGTCAATCCTGGGTGTCGAAGGATTCTCAGCGCTGCCCCAACATTGCCTGGCGATCTGCTTGGTCTTCTTTGTCGTAGCTATTTTGATCAACCTCCTGCGGGACGTCACTCCGAAGAGCGTCTCCAAGTTCATCCCGCTCCCGATGGCTATGGCTGTCCCATTCTACATTGGGGCGTACTTTGCGATCGACATGTTCGTTGGGACGGTTATCCTGTTTGTCTGGGAGAGGGTGAACCGCAAGGAATCTGAGGACTTTGCAGGCGCGATTGCATCTGGTTTGATCTGCGGTGATGGGATCTGGAGTGTTCCATCTGCGATATTGTCCATCATGAGGATTGACCCACCAATGTGCATGTACTTCAAGCCATCCCTTACCAGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016283