Os08g0106900

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Gene Name

Os08g0106900

Description

Transposase, IS4 domain containing protein

Version

NM_001067328.1 GI:115474392 GeneID:4344453

Length

2581 bp

Definition

Oryza sativa Japonica Group Os08g0106900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:334242..336822

Sequence Coding Region

334242..334751,334839..335168,335600..335973,336059..336284,336373..336822

Expression

GEO Profiles:Os08g0106900

Genome Context

<gbrowseImage1> name=NC_008401:334242..336822 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:334242..336822 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccattattattcaatctagaaaaagaaagagatgtgcacggagacaaggtgttaagtatggcccaatggatgaaagggatcgaatgagatttgaatacctagacacaaaaatttggaggaatgatacaacttgtatcgacatgcttagacttagaaaagattctttctttcgattttgtaagctgtttagagatcggggtttgcttgaggataccatccacatgcgtgttgaggagcaggttgctatgtttctaaatacagtgggacacaaccttagaaataggttagttcgcactaattttgataggtccggagaaacagttagtcgttatttcaacaaagtacttcatgctattggtgagctacgagatgaactaatcaggcccccctcattggacaccccaaataaaatagccgggaaccccagatgggatccttactttaaggattgtattggagctattgatggtacacacattagagcctctgtccggaagaatatggagtcttcatttcgtggtaggaagtctcatgccacgcaaaatgtaatggcggccgtagattttgatcttcggttcacttatgtcttggttggttgggaggggacagcacatgatgctgtagttttaagagatgcattggaacgtgaaaatggccttcgtattccacaaggaaaatactacctagttgatgctggatatggagccaaacaaggattccttcctccctttcgtgctgtccggtaccacttgaatgagtgggggaataatccggtgcaaaatgagaaggagttgttcaaccttaggcactcatcccttcgaatcacggttgagcgtgcatttgggtcactaaagagaagattcaaaattcttgatgatgccactccattcttccctttcccaactcaagtagatattgtagcagcttgctgcattattcataattgggtcataaatgatgggattgatgagcttttcataggtccaaatgaaataattgaacccaatgaaacatctattggcgaagcaaatgaacatgcattgatggaaatggatagcaaaggaaagggaggaagcaaccatgcttcatggacatatgcaatgtcctctttcatgttgtctcatctagccaatcttgtggctagtgggacgaggacttcttctggcttcaaacaggcccatctcaacgcatgtgcgagggctctcaatgagatgttttgtactaattttaccggtgatcagattaagaatcacttgaaaacatggcaaaagaagttcacaaagatgaacaggcttaggaaagtgagtgctgctggttgggatgaagttaattttgttattactcttgatgctgagcactacaatgaatatatcaaggatcacaagaccgatgctgagttttttaacaaacctcttctgcactatggtgagatgcttacaatctttgggagcacaatggctacaggaaagtttgcaaaggactcaagttcagttcttggtactgaagatgtagaaactgaaaacgaagaggtgaatcgtgctccaactactattgatcttgatgctgaaacttcatctgcaagcaagccaaagaaggccaaaacatctgaaagtgaagatgatgggttgattagggcaatcaccaatgtgggtgacaagcttgctgctgctatagtgaaggctggtgagccagataatacgctaccggtaggtttatttgacaccctgaaaagccttcctggttttcaggacatccacatatcattttactatgcttatttggtggctaaccctcacattgctagagctttcgatggacttccattcgaaaacaagctacattgggttgctatgttcattagtgacaagtttcctggatcaatgtag</cdnaseq>

Protein Sequence

<aaseq>MAIIIQSRKRKRCARRQGVKYGPMDERDRMRFEYLDTKIWRNDT TCIDMLRLRKDSFFRFCKLFRDRGLLEDTIHMRVEEQVAMFLNTVGHNLRNRLVRTNF DRSGETVSRYFNKVLHAIGELRDELIRPPSLDTPNKIAGNPRWDPYFKDCIGAIDGTH IRASVRKNMESSFRGRKSHATQNVMAAVDFDLRFTYVLVGWEGTAHDAVVLRDALERE NGLRIPQGKYYLVDAGYGAKQGFLPPFRAVRYHLNEWGNNPVQNEKELFNLRHSSLRI TVERAFGSLKRRFKILDDATPFFPFPTQVDIVAACCIIHNWVINDGIDELFIGPNEII EPNETSIGEANEHALMEMDSKGKGGSNHASWTYAMSSFMLSHLANLVASGTRTSSGFK QAHLNACARALNEMFCTNFTGDQIKNHLKTWQKKFTKMNRLRKVSAAGWDEVNFVITL DAEHYNEYIKDHKTDAEFFNKPLLHYGEMLTIFGSTMATGKFAKDSSSVLGTEDVETE NEEVNRAPTTIDLDAETSSASKPKKAKTSESEDDGLIRAITNVGDKLAAAIVKAGEPD NTLPVGLFDTLKSLPGFQDIHISFYYAYLVANPHIARAFDGLPFENKLHWVAMFISDK FPGSM</aaseq>

Gene Sequence

<dnaseqindica>2072..2581#1655..1984#850..1223#539..764#1..450#atggccattattattcaatctagaaaaagaaagagatgtgcacggagacaaggtgttaagtatggcccaatggatgaaagggatcgaatgagatttgaatacctagacacaaaaatttggaggaatgatacaacttgtatcgacatgcttagacttagaaaagattctttctttcgattttgtaagctgtttagagatcggggtttgcttgaggataccatccacatgcgtgttgaggagcaggttgctatgtttctaaatacagtgggacacaaccttagaaataggttagttcgcactaattttgataggtccggagaaacagttagtcgttatttcaacaaagtacttcatgctattggtgagctacgagatgaactaatcaggcccccctcattggacaccccaaataaaatagccgggaaccccagatgggatccttactttaaggtgtggcatttatctatctccttttcagatttttatttccaaatatatatgtggtccctaattatttatggtactgaacacaaattaggattgtattggagctattgatggtacacacattagagcctctgtccggaagaatatggagtcttcatttcgtggtaggaagtctcatgccacgcaaaatgtaatggcggccgtagattttgatcttcggttcacttatgtcttggttggttgggaggggacagcacatgatgctgtagttttaagagatgcattggaacgtgaaaatggccttcgtattccacaaggtaatagatatatttagttccatcaatttgtccatgggaaatgttaaaaggtagaaatttgatcaacttgtccctcatttgataggaaaatactacctagttgatgctggatatggagccaaacaaggattccttcctccctttcgtgctgtccggtaccacttgaatgagtgggggaataatccggtgcaaaatgagaaggagttgttcaaccttaggcactcatcccttcgaatcacggttgagcgtgcatttgggtcactaaagagaagattcaaaattcttgatgatgccactccattcttccctttcccaactcaagtagatattgtagcagcttgctgcattattcataattgggtcataaatgatgggattgatgagcttttcataggtccaaatgaaataattgaacccaatgaaacatctattggcgaagcaaatgaacatgcattgatggttcaattcaggcaagcccttgctgatcaaatgtgggaggaccgtcaaaaccatcgtggacactaatatgtagcagttctgttgtatggacatcttgatttttttgaatttctattgtatgtttaatttctggaccgagtttcacttgtatggacaacttgtttgctgatggtcatttgtatggacttgttggctgatttgtatggacttgtttgctgatggtcatttgaatggatgagctagttggttgaatttaatttgtatggttaaatatgctgttgatggtcatttttcttcactttatgtgtgaatttcatttaaatggacaacttgtttgctgaaaggtatttttatggtcattggtttattatttctgtaccatatcatgcttgctgaacttaattttcatttctaaatattatggcttgtaggaaatggatagcaaaggaaagggaggaagcaaccatgcttcatggacatatgcaatgtcctctttcatgttgtctcatctagccaatcttgtggctagtgggacgaggacttcttctggcttcaaacaggcccatctcaacgcatgtgcgagggctctcaatgagatgttttgtactaattttaccggtgatcagattaagaatcacttgaaaacatggcaaaagaagttcacaaagatgaacaggcttaggaaagtgagtgctgctggttgggatgaagttaattttgttattactcttgatgctgagcactacaatgaatatatcaaggtataaacactcctgttccatgaaaatttctacagacttttcatttttgttgcaagcacttattttgttaaatatgttacatgataggatcacaagaccgatgctgagttttttaacaaacctcttctgcactatggtgagatgcttacaatctttgggagcacaatggctacaggaaagtttgcaaaggactcaagttcagttcttggtactgaagatgtagaaactgaaaacgaagaggtgaatcgtgctccaactactattgatcttgatgctgaaacttcatctgcaagcaagccaaagaaggccaaaacatctgaaagtgaagatgatgggttgattagggcaatcaccaatgtgggtgacaagcttgctgctgctatagtgaaggctggtgagccagataatacgctaccggtaggtttatttgacaccctgaaaagccttcctggttttcaggacatccacatatcattttactatgcttatttggtggctaaccctcacattgctagagctttcgatggacttccattcgaaaacaagctacattgggttgctatgttcattagtgacaagtttcctggatcaatgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0106900, RefSeq:Os08g0106900