BGIOSGA016309

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Revision as of 04:27, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016309| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016309, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016309

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016309, complete gene.

LocusTag

OSJNBA0039C07.2

Ensembl Transcript ID

BGIOSGA016309-TA

Ensembl Protein ID

BGIOSGA016309-PA

Length

2983

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:17323353..17326335

Sequence Coding Region

17323353..17323614,17324035..17324136,17324282..17324377,17324468..17324560,17324657..17324736
,17324843..17325124,17325467..17325594,17325966..17326335

Genome Context

<gbrowseImage1> name=IndicaChromosome04:17323353..17326335 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:17323353..17326335 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGAGGCGCCATTGCTGCGGCGGTGTGCGCCGTGCTGCTGCTGCTGGTCGGCGGCAATGGCGGCGGGTGGTCGGCAATGGCGGCGGCCACCATGGAGGAGGACAGGATCGTGGCGCTGCCTGGGCAGCCGAACGTGAGCTTCGCGCAGTACTCCGGCTACGTCACGGTGGACGCCGCCAGGAGGCGGGAGCTCTTCTACTACTTCGCCGAGGCCGAGCTGGATCCGGCCACCAAGCCCCTCGTCCTCTGGCTCAATGGAGGGCCTGGCTGTTCATCAGTGGGAGTGGGAGCATTCTCAGAGAATGGGCCATTCAGGCCTAGTGGCAATGTGCTGGTGAGGAATGAGTATAGCTGGAACAAAGAGGCCAACATGCTGTATTTGGAGAGCCCTGCAGGAGTGGGCTTCTCCTACTCCACTGACCCTTCCTTCTATGGTGGTGTTGGTGATAGCAGGACAGCTAGGGACAACTTGAGATTCTTGCAAGGCTGGTTTGCCAAGTTTCCGCAGTACAAGGGCAGGGACCTGTACATTACAGGAGAGAGCTATGCTGGCCACTATGTTCCGCAATTAGCGCAGCGCATGGTCGAATTCAACAAGAAGGAGAAGCTGTTCAATCTGAAAGGCATTGCTCTGGGCAACCCGGTCCTCGAGTTCGCCACCGACTTCAACTCGAGGGCCGAGTTCTTCTGGTCGCACGGCCTCATCTCCGACTCGACCTACCACTCCTTCACGACGGTGTGCAACTACTCGCGCTATGTGAGCGAGTACTACCATGGCTCGCTTAGCTCCGCCTGTGACACTGTGATGACCCAGGTGGCCAGGGAGACTAGCCGGTTTGTCGACAAGTACGACGTCACCCTGGACGTTTGCGTCTCGTCGGTCTTGATGCAATCCAAATCCCTCGCCCCTCAGCGAGGGAGCAGGGAGCTGGACGTGTGCGTGGAGGACGAGACGATGGGGTACCTGAACCGGAAGGACGTGCAGGAGGCGATGCACGCCCGCCTCGAAGGCGGCGTGCCCAAGTGGACGGTCTGCAGCAGTGTTCTGGAGTACAAGCAGCTGGACCTGCAGATCCCGACCATCAACATCGTCGGCGGCCTCGTCAAGTCGGGCGTCCCGGTGCTGGTGTACAGCGGCGACCAGGACTCGGTGATCCCGCTGACGGGGAGCAGGACGGTGGTGCAGCGGCTGGCGGGGCGGCTGCGGCTGGGGACGACGGCGGCGGGGTACAGGGTGTGGTTCGAAGGGCGGCAGGTGGGCGGGTGGACGCAGTCGTTCGGCGGCGGCGCGCTGTCGTTCGCCACGGTGAGGGGGGCGTCGCACGAGGCCCCCTTCTCCCAGCCCGAGCGCTCGCTCGTCCTCTTCGCCGCCTTCCTCGCCGGCCGCCCCCTTCCCGACTCCTTCCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MRGAIAAAVCAVLLLLVGGNGGGWSAMAAATMEEDRIVALPGQPNVSFAQYSGYVTVDAARRRELFYYFAEAELDPATKPLVLWLNGGPGCSSVGVGAFSENGPFRPSGNVLVRNEYSWNKEANMLYLESPAGVGFSYSTDPSFYGGVGDSRTARDNLRFLQGWFAKFPQYKGRDLYITGESYAGHYVPQLAQRMVEFNKKEKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDSTYHSFTTVCNYSRYVSEYYHGSLSSACDTVMTQVARETSRFVDKYDVTLDVCVSSVLMQSKSLAPQRGSRELDVCVEDETMGYLNRKDVQEAMHARLEGGVPKWTVCSSVLEYKQLDLQIPTINIVGGLVKSGVPVLVYSGDQDSVIPLTGSRTVVQRLAGRLRLGTTAAGYRVWFEGRQVGGWTQSFGGGALSFATVRGASHEAPFSQPERSLVLFAAFLAGRPLPDSFQ</aaseq>

Gene Sequence

<dnaseqindica>1..262#683..784#930..1025#1116..1208#1305..1384#1491..1772#2115..2242#2614..2983#ATGAGAGGCGCCATTGCTGCGGCGGTGTGCGCCGTGCTGCTGCTGCTGGTCGGCGGCAATGGCGGCGGGTGGTCGGCAATGGCGGCGGCCACCATGGAGGAGGACAGGATCGTGGCGCTGCCTGGGCAGCCGAACGTGAGCTTCGCGCAGTACTCCGGCTACGTCACGGTGGACGCCGCCAGGAGGCGGGAGCTCTTCTACTACTTCGCCGAGGCCGAGCTGGATCCGGCCACCAAGCCCCTCGTCCTCTGGCTCAATGGAGGTAAAATTAAATTAAGCTAATAAATTTATGTACTGTACATTTGTGCAGTGTGCATGTAGCTGCATTATTGGGGGGAGGTGAGATTGCTCGAGCATTCGAGCAAGAACTGTGCAAGGTTGATAATGTAATGTGGGGGAAAAAATGTGAAATCGAGAAATGATAGGGAGATTAGTTTCTGTGTGAATGAGCCTAGAGCAAAACATGTTTAACTTTAGTTAATTGAGTTAAAGGAAAGATTTTCTTGGTTTGCTGCAAAAATGGGGGGAGAGAGCTTTGTTTTTTTTTTTGAATTGTATTTGGTAATTAAGCTTGTCAAATGAGGAATTCTGTAACCAGATTCTCATTCAAAGGGAGAATTCGTTCACACCGGAATTATTGGTGGTTAAGATTAACTTTTTGGTGCCCATATGCAATGTGTAGGGCCTGGCTGTTCATCAGTGGGAGTGGGAGCATTCTCAGAGAATGGGCCATTCAGGCCTAGTGGCAATGTGCTGGTGAGGAATGAGTATAGCTGGAACAAAGGTGAGAACTTGTATGTTGTAAACCACAATAGAGCAAACTTTTTTTCTTTTGTGCCCTCTTTTGCTTTCTATTGTTCCTTTTTTTCGCCGCGAAAAGATTGCGAGGAACGAAGAAAATTTGAGGCATCTGTTGGATGGTTTTTCAGAGGCCAACATGCTGTATTTGGAGAGCCCTGCAGGAGTGGGCTTCTCCTACTCCACTGACCCTTCCTTCTATGGTGGTGTTGGTGATAGCAGGACAGGTGAGTTCTATATATGCATTTGCCAAATTATGGCTCAATTTTGCGCAGAGTTAGATTTAACATTTTTGAGGGGCTTTTGAATTTCTTAAGCTAGGGACAACTTGAGATTCTTGCAAGGCTGGTTTGCCAAGTTTCCGCAGTACAAGGGCAGGGACCTGTACATTACAGGAGAGAGCTATGCTGGTAATTTAAGGCCACTCCACTGTATTGTCTTGTTGCTTTGATCAATTGTGAATTTTGTTAATTCATTCCCTAACTTGCACTGTAAGTGTTTTTCAGGCCACTATGTTCCGCAATTAGCGCAGCGCATGGTCGAATTCAACAAGAAGGAGAAGCTGTTCAATCTGAAAGGCATTGCTGTAAGCAAATCACCACCCCCACCAAGCTACATTTCACTCAAAACTCATGAGATCTGTCTTGGAATTCCTAATTACAAGATGTTGTCATTTGGTTCATCCTGATCAGCTGGGCAACCCGGTCCTCGAGTTCGCCACCGACTTCAACTCGAGGGCCGAGTTCTTCTGGTCGCACGGCCTCATCTCCGACTCGACCTACCACTCCTTCACGACGGTGTGCAACTACTCGCGCTATGTGAGCGAGTACTACCATGGCTCGCTTAGCTCCGCCTGTGACACTGTGATGACCCAGGTGGCCAGGGAGACTAGCCGGTTTGTCGACAAGTACGACGTCACCCTGGACGTTTGCGTCTCGTCGGTCTTGATGCAATCCAAATCCCTCGCCCCTCAGGTGAGAGTACATGGCATGCATTTTAATTACTGTGCAAACCGATGAGTTGCATGCGCCAACCAGTTCAGCCAAGAGCTTAAGCTGACAAGGAAAAGAGAGGCAGTTAAGGCTTGTTGTTTTACATGTTTTTTTTTTATTTTTTTGGCGTTGTAAGGTTGTCAAAATCGTGATCCTGAAACAGCAGTCATAGAATCGTTTACATGAAAATCGTAAAATTGTTGATTCTACCTATATAGAATCGTGGAATCAGGCACCTTAACTAGGATCGTAAAGTCGTAAAATCGTATGACGGAATCGAGATTCTGACAACCTATTGTGCGTGTTGCGCATTTGCTTTTGCAGCGAGGGAGCAGGGAGCTGGACGTGTGCGTGGAGGACGAGACGATGGGGTACCTGAACCGGAAGGACGTGCAGGAGGCGATGCACGCCCGCCTCGAAGGCGGCGTGCCCAAGTGGACGGTCTGCAGCAGGTGCATTTTTCCTCAAACTTTTATCAGTAATCCGCAATATGCCGCATTGCTGCTGCTGCACTTCAGCAAGCTCACTCAGTAGTCAGTACTGTGTTGCATTGCAAGAGAAATTAAGCTAACATTCAGCTCTGCAATCTGCATTTGCCTCTGCTTCAGCAAGCTCACTTGGTACTATTGCATTGCTAGAGAAAGCTACTCCCTCCGTTACAGGTTATAAGATCAAACTGCTTTAAGTTTGACTAAGCTTATAAACAAATATAGTAATATTTACATCACCAAATTAGTTTTTATTAAATTAATAATTAAATATTTATTATTTTTCCTTATTAATGTTTTTTTCCTTGAACAACAATGCACGTACATCGATGCAGTGTTCTGGAGTACAAGCAGCTGGACCTGCAGATCCCGACCATCAACATCGTCGGCGGCCTCGTCAAGTCGGGCGTCCCGGTGCTGGTGTACAGCGGCGACCAGGACTCGGTGATCCCGCTGACGGGGAGCAGGACGGTGGTGCAGCGGCTGGCGGGGCGGCTGCGGCTGGGGACGACGGCGGCGGGGTACAGGGTGTGGTTCGAAGGGCGGCAGGTGGGCGGGTGGACGCAGTCGTTCGGCGGCGGCGCGCTGTCGTTCGCCACGGTGAGGGGGGCGTCGCACGAGGCCCCCTTCTCCCAGCCCGAGCGCTCGCTCGTCCTCTTCGCCGCCTTCCTCGCCGGCCGCCCCCTTCCCGACTCCTTCCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016309