BGIOSGA016324

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Revision as of 04:27, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016324| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016324, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA016324

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016324, complete gene.

LocusTag

OSIGBA0155K12.6

Ensembl Transcript ID

BGIOSGA016324-TA

Ensembl Protein ID

BGIOSGA016324-PA

Length

3845

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:17630651..17634495

Sequence Coding Region

17630651..17631020,17631115..17631363,17631702..17631752,17631859..17632119,17632279..17632331
,17632598..17632739,17632824..17633078,17633471..17634495

Genome Context

<gbrowseImage1> name=IndicaChromosome04:17630651..17634495 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:17630651..17634495 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGTCGGCGCTGGAGGTGGAGGGCTCGGGCTCGCCGGGCGTCGAGCCGGCGGCGACGGCGACGGCGAGCAGGCTGAAGCGGCACGACTCGCTGTTCGGAGACGCGGAGAAGGTGAGCGGCGGGAAGCACCACGGGGGGTCGGCGGTGAGCTGGGCGGTGACGCTGCACCTGGCGTTCCAGAGCGTGGGCATCATCTACGGCGACATCGGCACGTCGCCGCTGTACGTCTACTCCAGCACGTTCCCGGACGGCATCGGCCACCGCGACGACCTCGTCGGCGTCCTCTCCCTCATCCTCTACACCCTCATCATCATCCCCATGCTCAAGTACGTCTTCATCGTCCTCTACGCCAACGACAATGGCGACGGTGGCACGTTCGCGCTCTACTCGCTGATCTCCCGGTACGCCAAGATCAGGATGATCCCGAACCAGCAGGCGGAGGACGCCATGGTGTCCAACTACAGCATCGAGGCGCCCAGCTCGCAGCTGAGGAGGGCGCAGTGGGTGAAGCACAAGCTCGAGAGCAGCCGTGCCGCCAAGATGGCGCTCTTCTTCCTCACCATCCTCGGCACCTCCATGGTCATGGGCGACGGCACCTTGACCCCCGCCATCTCCGTGCTCTCTGCGGTGAGCGGGATCAGGGAGAAAGCTCCAAACTTGACTCAGACGCAAGTCGTGCTGATCTCGGTGGCCATCCTGTTCATGCTCTTCTCCGTCCAGCGGTTCGGCACCGACAAGGTCGGCTACACCTTCGCCCCGATCATCTCGGTGTGGTTCCTCCTCATCGCCGGCATCGGGCTGTACAACCTCGTCGTCCACGAGATCACCATCCTCAAAGCCTTCAATCCGTGGTACATCGTGCAGTACTTCAGGAGGAACGGCAAGAAGGGTTGGGTGTCTCTCGGTGGCGTCGTCCTCTGTGTCACAGGCACAGAGGGAATGTTTGCCGACCTGGGCCATTTCAACATCAGGGCCGTGCAGATCAGCTTCAACTGCATCCTGTTCCCATCGGTGGCGCTCTGCTACATCGGGCAGGCAGCGTACCTGAGGAAATTCCCTGAGAATGTCAGTGACACCTTCTACAAATCCATCCCAGGCAAGTACAGAGATCGACTGAATTTTGGGCCGCTGTTCTGGCCGACGTTCATCGTCGCGATCCTCGCCGCCATCATCGCCAGCCAGGCCATGCTCTCCGGCGCGTTTGCCATCCTCTCCAAGGCGCTGTCCCTCGGGTGCTTGCCCAGGGTCCGGGTGATCCACACCTCTAAGAAGTACGAGGGGCAGGTGTACATCCCCGAGGTGAACTTCATGATGGGTCTCGCCAGCATCATCGTCACCATCGCCTTCAGGACCACCACCAGCATCGGCAACGCCTACGGGATCTGTGTGGTGACGACGTTCATGGTGACGACGCACCTGATGACGGTGGTGATGCTGCTGATATGGAAGAAGCACCTGGTGTTCATCCTGCTCTTCTACTGCGTGTTCGGGTTCACGGAGGTGGTGTACCTGTCGTCGATCCTGTCCAAGTTCGTGGACGGCGGGTACCTCCCCTTCTGCTTCGCCATGGTGCTGATGACGATGATGGCGACGTGGCACTACGTCCACGTGCGGCGCTACTGGTACGAGCTGGACCACATCGTCCCCACGGCGGAGCTGGCGTCGCTGCTGGAGGAGAACGGCGGCGTGCGGCGGGTCCCCGGCGTGGGCCTCCTCTACACGGAGCTCGTCCAGGGCATCCCGCCGCTGTTCCCGCGCCTCGTCCGCAAGATCCCCTCGGTCCACGCCGTCTTCGTCTTCATCTCCATCAAGCACCTCCCCATCCCGCACGTCGCCGCCGCCGAGCGCTTCCTGTTCCGCCAGGTCGGCCCCCGCGCCCGCCGCGTCTTCCGCTGCGTCGCCCGCTACGGCTACACCGACGCCCTCGAGGAGCCCCGGGAGTTCGCCGCCTTCCTCGTCGACGGCCTCAAGATGTTCATCCAGGAGGAGTCCGCCTTCGCTCCTCATCAAGAGATGATCGATGCCGCCGCCGACGACGACGACGAGGCGGCGGCGAGGCCGAGGCGGTCGACGAGCTCGGCCGTGCACAGCGAGGAGGCGATCCAGGCGGCGTCGTCGGGGAGGACGACGGCCAGCAGCGTCCAGCTCCAGGCGGGCGGCGAGCCGCCGGCGGCGATGGACGTGGAGGAGGAGAAGCGGCTGATCGACAGGGAGGTGGGCCGCGGCGTGGTGTACCTGATGGGCGAGGCCAACGTGTCGGCGGGGCCCAACTCGTCCATCCTCAAGAGGATCGCGGTGAACTACATCTACACCTTCCTGAGGAAGAACCTGACAGAAGGGCACAGGGCACTGGCGATTCCAAACGATCAGCTGCTCAAGGTTGGGATCACGTATGAAATCTAG</cdnaseq>

Protein Sequence

<aaseq>MSSALEVEGSGSPGVEPAATATASRLKRHDSLFGDAEKVSGGKHHGGSAVSWAVTLHLAFQSVGIIYGDIGTSPLYVYSSTFPDGIGHRDDLVGVLSLILYTLIIIPMLKYVFIVLYANDNGDGGTFALYSLISRYAKIRMIPNQQAEDAMVSNYSIEAPSSQLRRAQWVKHKLESSRAAKMALFFLTILGTSMVMGDGTLTPAISVLSAVSGIREKAPNLTQTQVVLISVAILFMLFSVQRFGTDKVGYTFAPIISVWFLLIAGIGLYNLVVHEITILKAFNPWYIVQYFRRNGKKGWVSLGGVVLCVTGTEGMFADLGHFNIRAVQISFNCILFPSVALCYIGQAAYLRKFPENVSDTFYKSIPGKYRDRLNFGPLFWPTFIVAILAAIIASQAMLSGAFAILSKALSLGCLPRVRVIHTSKKYEGQVYIPEVNFMMGLASIIVTIAFRTTTSIGNAYGICVVTTFMVTTHLMTVVMLLIWKKHLVFILLFYCVFGFTEVVYLSSILSKFVDGGYLPFCFAMVLMTMMATWHYVHVRRYWYELDHIVPTAELASLLEENGGVRRVPGVGLLYTELVQGIPPLFPRLVRKIPSVHAVFVFISIKHLPIPHVAAAERFLFRQVGPRARRVFRCVARYGYTDALEEPREFAAFLVDGLKMFIQEESAFAPHQEMIDAAADDDDEAAARPRRSTSSAVHSEEAIQAASSGRTTASSVQLQAGGEPPAAMDVEEEKRLIDREVGRGVVYLMGEANVSAGPNSSILKRIAVNYIYTFLRKNLTEGHRALAIPNDQLLKVGITYEI</aaseq>

Gene Sequence

<dnaseqindica>1..370#465..713#1052..1102#1209..1469#1629..1681#1948..2089#2174..2428#2821..3845#ATGTCGTCGGCGCTGGAGGTGGAGGGCTCGGGCTCGCCGGGCGTCGAGCCGGCGGCGACGGCGACGGCGAGCAGGCTGAAGCGGCACGACTCGCTGTTCGGAGACGCGGAGAAGGTGAGCGGCGGGAAGCACCACGGGGGGTCGGCGGTGAGCTGGGCGGTGACGCTGCACCTGGCGTTCCAGAGCGTGGGCATCATCTACGGCGACATCGGCACGTCGCCGCTGTACGTCTACTCCAGCACGTTCCCGGACGGCATCGGCCACCGCGACGACCTCGTCGGCGTCCTCTCCCTCATCCTCTACACCCTCATCATCATCCCCATGCTCAAGTACGTCTTCATCGTCCTCTACGCCAACGACAATGGCGACGGTAAGAATCGATCAAGAAAACCTCCTTCTTCTTCCTCCTCCTCCATCATCGATCGTCTCAGCATCTCTGAATTGAATCTCTGATGACGTTGCAGGTGGCACGTTCGCGCTCTACTCGCTGATCTCCCGGTACGCCAAGATCAGGATGATCCCGAACCAGCAGGCGGAGGACGCCATGGTGTCCAACTACAGCATCGAGGCGCCCAGCTCGCAGCTGAGGAGGGCGCAGTGGGTGAAGCACAAGCTCGAGAGCAGCCGTGCCGCCAAGATGGCGCTCTTCTTCCTCACCATCCTCGGCACCTCCATGGTCATGGGCGACGGCACCTTGACCCCCGCCATCTCCGGTAAAAAAAGAAATAAAATCAAACGCATCAATCGATCGATCAGTTAGTCAACATTTATCACATTATGTCAGTGGTAAGAGTTGGGTTTCGGGCGATCTTGGCTGTGTTCCGTTGTTGGTTTAGCGGCAATCGGTCACGCTTAGTGGTGGCCGGTTCGGTGCTAGCCTTCTTCTGGGGCTGTGTGTTGGTGCTGTCAGTGTGTGGGTGGTGGTATACTTTTTTTTCCTAGTTACGATCTTCCGAGGTTATAATCTTGCAATTTTTTCCTACTCTATCTCGTTAAAAAAAAACATTTATCACATTATGTGTATACCTTGTGTTGTGTGCTTTGCCTGCAGTGCTCTCTGCGGTGAGCGGGATCAGGGAGAAAGCTCCAAACTTGACTCAGAGTATGTGTGACAGAATTTTATCCAGAATTTGTCACTGAATGATTCAGAAAATGTTTTGAACCAAAGAAACCTGACATTTAAATTTTCTTGGTGGTGTTTTTTGCAGCGCAAGTCGTGCTGATCTCGGTGGCCATCCTGTTCATGCTCTTCTCCGTCCAGCGGTTCGGCACCGACAAGGTCGGCTACACCTTCGCCCCGATCATCTCGGTGTGGTTCCTCCTCATCGCCGGCATCGGGCTGTACAACCTCGTCGTCCACGAGATCACCATCCTCAAAGCCTTCAATCCGTGGTACATCGTGCAGTACTTCAGGAGGAACGGCAAGAAGGGTTGGGTGTCTCTCGGTGGCGTCGTCCTCTGTGTCACAGGTAATTAATTATACTTAATTACCTTCCATTTTCTGACAAATGTTACACAAATGTAACTGCAGATGAATCCATTCCTAATTCTGTTGTAGCCTGTAGTAAATTTTTACTGATTCTGACTAGCTGTAAGTAATAACCTTAATATGATTCCATCTGCAACAGGCACAGAGGGAATGTTTGCCGACCTGGGCCATTTCAACATCAGGGCCGTGCAGGTATGTATATATGGACACACACCTGACACCCATGCTTTGTCTGAGAAATAGCAGTAGCCAGGGTTTGAATATCGCGCAGCACGGTTATCGTACTAACCACGTGCGGTAACCTTTTCAGTTTTTTTAAACCCTCGGTTTTTCACGGTAACCGTGATATCGCTGGGTAGCAGTAACCCTCACCAAAACGCGAGGAAGGGGAACCCCTTGTAGTAACAACCTGGATGTCTGAACTCTGAAACGGCTCTGGTTTTTTCTTTCTGTCGCAGATCAGCTTCAACTGCATCCTGTTCCCATCGGTGGCGCTCTGCTACATCGGGCAGGCAGCGTACCTGAGGAAATTCCCTGAGAATGTCAGTGACACCTTCTACAAATCCATCCCAGGCAAGTACAGAGATCGACTGAATTTTGGTAGAACAGAGTATATTCATCACTGACGCTTACTCTGCTCTGCTAACTCTGTCTTCTTCATGTGCTGCTGCTGCTGCATCGCAGGGCCGCTGTTCTGGCCGACGTTCATCGTCGCGATCCTCGCCGCCATCATCGCCAGCCAGGCCATGCTCTCCGGCGCGTTTGCCATCCTCTCCAAGGCGCTGTCCCTCGGGTGCTTGCCCAGGGTCCGGGTGATCCACACCTCTAAGAAGTACGAGGGGCAGGTGTACATCCCCGAGGTGAACTTCATGATGGGTCTCGCCAGCATCATCGTCACCATCGCCTTCAGGACCACCACCAGCATCGGCAACGCCTACGGTAACATCTCTTTTTCTCATCATCAGCTTAAACTTTTAGGTTGAACTGGTTGATCGACTGATATGATCTATTGAGTTGAAATATGTTTTCAATTTTGAAATTTAGTACATTTCGATATTTTTGACCGAAATTATTTAAAAATTTGATTAATTTTGAATGAATTTGAATAAAATTCGACCAAGTTCACATAAATTTGCAAAAAAAAAAAAAAGAAAATTTCGGATGAGCTATGTGCTTGGCGGTGGGGGGCGAAATTTCTAAAATTTCAATCCCTGAGTTGAACTGGTTGACTAACTGGTTTGAGCTTTTGAGTTGAACTGGTTGACTGATTGATATGAGCTTTTGTGTTGAACTGGTCGGTAACTGATCTGAACGTTTATGGGTGTATATAGGGATCTGTGTGGTGACGACGTTCATGGTGACGACGCACCTGATGACGGTGGTGATGCTGCTGATATGGAAGAAGCACCTGGTGTTCATCCTGCTCTTCTACTGCGTGTTCGGGTTCACGGAGGTGGTGTACCTGTCGTCGATCCTGTCCAAGTTCGTGGACGGCGGGTACCTCCCCTTCTGCTTCGCCATGGTGCTGATGACGATGATGGCGACGTGGCACTACGTCCACGTGCGGCGCTACTGGTACGAGCTGGACCACATCGTCCCCACGGCGGAGCTGGCGTCGCTGCTGGAGGAGAACGGCGGCGTGCGGCGGGTCCCCGGCGTGGGCCTCCTCTACACGGAGCTCGTCCAGGGCATCCCGCCGCTGTTCCCGCGCCTCGTCCGCAAGATCCCCTCGGTCCACGCCGTCTTCGTCTTCATCTCCATCAAGCACCTCCCCATCCCGCACGTCGCCGCCGCCGAGCGCTTCCTGTTCCGCCAGGTCGGCCCCCGCGCCCGCCGCGTCTTCCGCTGCGTCGCCCGCTACGGCTACACCGACGCCCTCGAGGAGCCCCGGGAGTTCGCCGCCTTCCTCGTCGACGGCCTCAAGATGTTCATCCAGGAGGAGTCCGCCTTCGCTCCTCATCAAGAGATGATCGATGCCGCCGCCGACGACGACGACGAGGCGGCGGCGAGGCCGAGGCGGTCGACGAGCTCGGCCGTGCACAGCGAGGAGGCGATCCAGGCGGCGTCGTCGGGGAGGACGACGGCCAGCAGCGTCCAGCTCCAGGCGGGCGGCGAGCCGCCGGCGGCGATGGACGTGGAGGAGGAGAAGCGGCTGATCGACAGGGAGGTGGGCCGCGGCGTGGTGTACCTGATGGGCGAGGCCAACGTGTCGGCGGGGCCCAACTCGTCCATCCTCAAGAGGATCGCGGTGAACTACATCTACACCTTCCTGAGGAAGAACCTGACAGAAGGGCACAGGGCACTGGCGATTCCAAACGATCAGCTGCTCAAGGTTGGGATCACGTATGAAATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016324