BGIOSGA016330

From RiceWiki
Revision as of 04:27, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016330| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016330, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016330

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016330, complete gene.

LocusTag

OSJNBB0118P14.7

Ensembl Transcript ID

BGIOSGA016330-TA

Ensembl Protein ID

BGIOSGA016330-PA

Length

3596

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:17773543..17777138

Sequence Coding Region

17773543..17773691,17773792..17773882,17773982..17774070,17774534..17774589,17775199..17775345
,17776464..17776589,17776667..17776935,17777085..17777138

Genome Context

<gbrowseImage1> name=IndicaChromosome04:17773543..17777138 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:17773543..17777138 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCCCCTCGCCGCTGCTCGCCCGGCCGCCGGCGCCGTCGAGCCCGAGCACGTACCCGTCCCTCCCGCCTCGCCGGTGCGCCCCGGCTGTAGCTTCCGCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCCACTCCGATTGACGTCGTTGCCGATGTGAAAACCGAGAAGATTGTGGTGTTGGGAGGGAGTGGATTCGTTGGCTCTGCTATCTGCAAAGCTGCTGTCTCTAAGGGTATTGAGGTTGTGAGCCTCAGCAGGTCAGGGAGACCATCTTACTCTGATCCTTGGGTTGATCAAGTTACTTGGCTAGCAGGAGATGTTTTCTATGCAAGATGGGATGAAGTGTTAGTTGGTGCCACTGCTGTTGTGTCTACCCTTGGAGGATTCGGTAATGAAGAACAGATGAAAAGGATAAACGGTGAGGCAAATGTAACAGCAGTAGATGCTGCAAAAGAATTTGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCCAAATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTAGATGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTACTTTCCTCTGTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCCCCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTCTTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAATGTATGAATCCTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGGGCTTTGA</cdnaseq>

Protein Sequence

<aaseq>MSPSPLLARPPAPSSPSTYPSLPPRRCAPAVASAALRVAPATASRAPFSRLVTKRNFAASDIREDYSTPIDVVADVKTEKIVVLGGSGFVGSAICKAAVSKGIEVVSLSRSGRPSYSDPWVDQVTWLAGDVFYARWDEVLVGATAVVSTLGGFGNEEQMKRINGEANVTAVDAAKEFGIPKFILISVHDYNLPSFLLNSGYFTGKRKAESEVLSKYPTSGVVLRPGFIYGKRKVDGFEIPLDVVGQPLEKLLSSVENFTKPLSSLPASDLLLAPPVSVDDVAYAVINGVIDDSFFGVFTIEQIKEAAAKCMNPGACSLQAERKNGL</aaseq>

Gene Sequence

<dnaseqindica>1..149#250..340#440..528#992..1047#1657..1803#2922..3047#3125..3393#3543..3596#ATGTCCCCCTCGCCGCTGCTCGCCCGGCCGCCGGCGCCGTCGAGCCCGAGCACGTACCCGTCCCTCCCGCCTCGCCGGTGCGCCCCGGCTGTAGCTTCCGCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGGTAACCCCCCCACCTTCTCCCTCTGTCTCCTTGTTCACTGGCTCACTGCGAAATTTGGGCTAGAGTTTACAGTGACGCGGGTTTCTCTTTGATGCCGCAGGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCCACTCCGATTGACGTCGTTGCCGATGTGAAAACCGAGAAGGCATGAACCTGAGCAGCTGAAATTCTATATCTTGCTTGTTAGGTAGTGCCGTTTTACTCCCTCCCCCAACATTCTGAAACGTTTCTCGATGTCTTGCAGATTGTGGTGTTGGGAGGGAGTGGATTCGTTGGCTCTGCTATCTGCAAAGCTGCTGTCTCTAAGGGTATTGAGGTTGTGAGCCTCAGCAGGTACCACAACCTTTTCTCGTATACCTTGAACCAATCACCATATGTTGTGTAGGTCATCACTACTGAGAAATGCAATTTTTTTCATCATGTTCCTATATGTTTCCAATAGCTTCCAGTCTAGTTTTATTACCTCACATTTCGCACCTTAGCTTGCTTATTTTCGTAATCGGATCAACCAACTTGGTCTTGCAGTGTTAACTTTCTGAAGGTCTTTCTTGCATGACTTCTTGACTCTTGGGTAGGCTGTCCAGTGTGAGCTCCTAAATTCTTCATACTCAGCACAAACCATAGTTTTGTATACACATTTTTTATTGAGGGTATGATTATTGGCATCAGGGGGGTTAGACAAAGCTTTGAAAATTGGTGTGAGTCCGAGAAAAAAAAGAGAACATGTATATATTATATATCTGACTACCAAATCTGCGTTCTGTCACATTTGCTTCACAGTGTGTGTTCATGGCAGGTCAGGGAGACCATCTTACTCTGATCCTTGGGTTGATCAAGTTACTTGGCTAGCAGGTATGCTTTAGTTATGTAAATCTTCTGGGTTACTGGATCCAGCTTACTAACATAAGTTCACTCTCCAAGCCTAGTAGTGTTTTGTTGTTGATCGAAACTGGATATGCTACATGTCATGATGCTTTGACCTGCAAATAATGGCTTTATCAAGTAGATTATAGCGCAACTTACAGGAAGAATGCCAATCACCAGATTTTATCCAGAGATAATACTTTTACAGAAATATGTACATTATGTGTAACAGAATCTGTGGTACTTTACTAACTTTATGATTACGCCATTCTTTTTACCTTTCGCTTTGTTGGCCGATGGCATGTCTACAGTATTTATTTCTGCTTGTTGCTGAGTTCTGATAGATGCATATATTGTTTGTTTGGAAACAACTCTGCACCTAAGTACTTATCATTGCCTCTTTGTTTTGGCCATGATTACTGGATTTAACATTATTCTCACAGAGACCAAACTTGATTTATGGCCTCAGTAATTCCACCTTACCATCTTGTTCCTGTGACTTAGTCAGATGACTATATTGGATTTCCAAGAGTGTGATTTATATACTGTGTTTATTTTTTGCTGCTCTGTTCATTTAAGCATCTTACTATGTTGCAGGAGATGTTTTCTATGCAAGATGGGATGAAGTGTTAGTTGGTGCCACTGCTGTTGTGTCTACCCTTGGAGGATTCGGTAATGAAGAACAGATGAAAAGGATAAACGGTGAGGCAAATGTAACAGCAGTAGATGCTGCAAAAGAATTTGGTAAGTACCGCATTATGACAGTGGTGTGCCAATTTGTTTGCATATGCATATGACATCAGGTGCATATTATGCAATTCCATGCTTAACCTAAGTTTCTTTGAGCAGTCACACTGAAAGATACTCTTTCCTTCGAATTTTATAAGGAGAAATTTTACAGTCATTGATAAAGTACCTCGAGGTACCTAAATTCTACTCTAATTTTTTTAGTAACTTGAAGTACTAAGTAATTGGAGATACCAAATTCTACACTAGAAAATGTAGTACCTCCTGGTACGTTTTCAGTGATAGTAAAATTACCCTTTTTTGAGGGTTCTTTGTTTTGCAATCATCTGCAAATTATAATCTGTTCATGTATTTTGTTGCTATTCTCTTCTACTATTATTTATTTCGTTCTGTTCTGTAAAAAAATACCAGGACTAACCACATAAAAGATTGTCTTATTTTTCGAAAGAACCTAATGATACATTAGTCATTCTCTTCTATAATCTTCTCAATCTCACAAATTTCTTAATCTATGCATGGGTCAAATCAGAAAATATGCCTTGTAAAAATTGACTGAAGGGTGTAAAAATTGACTGAAGGGGTAGTATATTGTGCTGTATGATGCAAATCAAACCAACTGGATTTTTTAACTCAAAATATTCACTCAAATGCTCTGATAAGTACCACACTTGACAACTCACTGTAATGTGTCTACGAGGTGTCAACAAATCAAAATGAATTACTCTATGTTGGTACTATCATTATGAGAATCTAGAGAGAAAATTGCAGCAAATGTACCCACCCTATTATAAAGTATAGGCTCCTACTTTTACTTAGTTTTGCAATCTACCAAGTTTCTAATTACTGTAAAGCTGACACATGCTTTGATTTTATTGTAGTTTAAATTATATAAATTTGTAAGCCTGAAACTTGAAGGTAGTCAGGCACGCGTTGTGAAATAAATGAATTTTGCTAGGAAATTTGTTGTACTGATTACTATGACAGATTAAATACCTCAAACAGCTGGAACTTATCCCTCGTACAACTGTGCCACTGTCTCGTTAACCTACTCTTTCCTTTTTTATTGAAACGGATAAAATAATGTAACATAGCTTCTTTGGTGTATTCTTCTGCAGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCCAAATACCCAACCTCAGGTTAGACTATATTTATGCCTCCAAAAAAACTCACTTTACATTTTTGTCATGTTTCTAATCTATATTTTTTTAATCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTAGATGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTACTTTCCTCTGTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCCCCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTCTTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACTGGGAGTCTTTATTGCCAAGATGGAAGATTCAAACATGCGGCTCCTTATTAAGAGATATCCCTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTCAAAACTTTGTACAGTGTATGAATCCTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGGGCTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016330