BGIOSGA016335

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Revision as of 04:27, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016335| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016335, complete gene.| tag = OS04G04...")
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Gene Name

BGIOSGA016335

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016335, complete gene.

LocusTag

OS04G0405000

Ensembl Transcript ID

BGIOSGA016335-TA

Ensembl Protein ID

BGIOSGA016335-PA

Length

5181

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:17863168..17868348

Sequence Coding Region

17863168..17863760,17864286..17864455,17864551..17864780,17864889..17864997,17865088..17865218
,17865880..17865981,17866176..17866457,17866566..17866687,17866770..17867064
,17867158..17867391,17867539..17867829,17868037..17868348

Genome Context

<gbrowseImage1> name=IndicaChromosome04:17863168..17868348 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:17863168..17868348 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGTGCTGCTGCTCGTCGTCGTCGGTGCCGTCCGCGTCCATCCTCGCCACGGGCGCCGGCCTCCGCCGCCGGTTCTCCCCTGCGGGGGCCGGCGGGGGTGGGAGGGCGGTGGCGGTTGCGGCAGGGCGACCGATCCGCGCGTCCGCGGCTCTGCTGGCCGCGCCCGCGCCGCGGCGGCGCGGGGGCGTCGTCGTGAGGGCGGTGTTCGAGCGGTTCACGGAGCGGGCGGTGAAGGCGGTGGTGTTCTCGCAGCGGGAGGCGCGCGGGATGGGGGACGAGACGGTGGCGCCGCACCACCTGCTGCTGGGCCTCGTCGCGGAGGACCGGTCGCCGCTGGGGTTCCTCGCCTCGGGCGTCCGCGTCGAGCGCGCCCGCGAGGCGTGCCGCGCCGCCGTGGGCAAGGAAGGGCTCGCGCAGGCGCCGGTCGGGCTGGCCACGGACGTGCCCTTCTCGGGGGCCAGCAAGCGCGTCTTCGAGGCCGCCGTGGAGTTCTCCAGGAACATGGGATGCAACTTCATCTCGCCGGAGCACATTGCGCTCGGCCTCTTCAACCTGAACGATCCCACCACGAACAACGTCCTTAAGAGCTTAGGAGTAGATTCAAGTCAGCTAGCAAAGCAGGCACTTACCCGAGTCCAAGGGGAGCTTGCAAAGGATGGAAGAGAGCCTGTCGGATTATCTTCTTTTAAAGTGCGTGAGAAATTTACTCCTGGAGGTGGGAAGTCTGCAATTGTCAAATACTCGAATAAAAAGAAAGAGAAGAGTGCACTGGCTCTATTTTGTCTAGACTTGACCATGCGAGCCAGTGGAGGATTGATTGATCCTGTTATTGGTCGCAAGGATGAGATTGAAAGAGTAGTTCAGATTATATGCCGCCGCACGAAGAACAATCCAATTCTTTTGGGCGAAGCAGGTGTTGGTAAGACTGCCATTGCTGAGGGTTTGGCCCATAAAATTGCCAATGGAGATGTTCCTATTTTCCTCGTGGGAAAGCGTATATTATCATTGGATGTTGCTCTACTAATGGCTGGTGCTAAAGAGAGGGGTGAACTGGAAGCCAGAGTTACTAGTTTAATACGTGAAGTGCGCAAAGCAGGTGATGTTATACTGTTCATTGATGAAGTCCATACTCTTATTGGGTCTGGGATTGCTGGAAGAGGAAGCAAAGGAGCTGGTCTTGATATTGCGAATTTGCTGAAGCCTGCACTGGCTAGAGGAGAATTGCAGTGTATTGCATCTACAACTCTGGATGAACACCGATTGCATTTTGATAAGGATAAGGCTTTGGCTCGCCGATTTCAGCCTGTTTTGGTGAATGAGCCTAGCCAGGAGGATGCTGTGAAGATATTACTTGGTCTGCGTGAGAAGTATGAGACCTATCACAAATGCAAATACACTTTGGAAAGCATCAATGCAGCAGTTTATTTGTCAGCAAGATATATTGCTGACAGACATCTTCCCGATAAGGCCATTGATCTAATTGATGAAGCTGGCAGTAGAGCTAGGATGGAATCATTTAAAAGGAAGAAGGAGGAACAATGCTCTATTCTCTCAAAATCACCAGATGAGTACTGGCAAGAGATTAGAGCTGTCCAGAACATGCATGAAGTGGCACTGACTAACAAGGTAAAATATTCTCTAAATCAGAATGACCAAGAGGATGCTGTTGATATTGAACTCGTGGGTGAGGACAAAACAAGTCCAGCATCTATGCTATCAACTTCAACTGATAAACCATCTCTGGTTGGATCAGAGGAAATTGCAAGAGTCACATCATTGTGGTCAGGCATACCAGTTCAGCAGTTGACTGCAGATGAAAGAAAGCTTCTAGTAGGACTGGATGATGAACTCAGGAAACGTGTCATAGGTCAAGACGATGCTGTTCTAGCCATATCTAAAGCTGTGAAGAGATCGCGTGTTGGCCTCAATGACCCTGACAGACCTATTGCTACACTAATTTTCTGTGGCCCAACAGGTGTTGGAAAAACTGAGCTCACGAAAGCTCTAGCAGCAAGTTATTTTGGATCTGAATCAGCTACTGTTAGGTTAGATATGAGTGAGTATATGGAGCGGCATGCTGTGAGCAAGTTGATAGGCTCTCCTCCAGGATACATGGGATTTGGTGAAGGTGGTACTTTGACTGAAGCAGTCAGGAGAAAACCATTCACTGTGGTGTTGCTTGATGAAATAGAGAAAGCTCATCCTGATATTTTCAATATTCTTCTTCAAATATTCGAAGACGGTCATTTGACTGATTCACAGGGCCGGAGGGTTTCCTTCAAGAATACATTAATTGTGATGACATCAAATGTTGGTTCCACATCAATTTCTAATGGAAAGAGGAGCATAGGTTTCCAGACACAAACTGATACTGAAGAAAAGTCATATGCTGCAATGAAATCTTTGGTAATGGAAGAACTGAAGGCATTTTTCCGTCCCGAATTGCTCAATAGAATTGATGAAGTGGTTGTGTTCCACCCTCTTGAGAAAACTCAGGCATGTTGCTTTTATAGATACTGCACTTGCATATTGCCTTGTACTTTTGTTAATACTATGCTGGCTATTCTCAATATAATGCTGCAAGAGGTGAAGGGTAGGATTTTAGCCCTTGGGATTGGCCTAGAGGTGTCTGATTCCATGAAGGACCTGATTTCTCAGCATGGGTACGACAAGAGCTACGGTGCACGGCCACTAAGAAGAGCCGTCACTCAGCTGGTTGAGGATGTTATCAGCGAAGCAATTCTGTCTGGTCAGTTCAAGCCTGGTGACACCATAATGATGGACACTGATGCCACGGGGAAACCTTGCTTGAGCCGACTGAATGATCAGACCGTCCAATTATCCGATCCGACACCAACACTTTGA</cdnaseq>

Protein Sequence

<aaseq>MEACCCSSSSVPSASILATGAGLRRRFSPAGAGGGGRAVAVAAGRPIRASAALLAAPAPRRRGGVVVRAVFERFTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDRSPLGFLASGVRVERAREACRAAVGKEGLAQAPVGLATDVPFSGASKRVFEAAVEFSRNMGCNFISPEHIALGLFNLNDPTTNNVLKSLGVDSSQLAKQALTRVQGELAKDGREPVGLSSFKVREKFTPGGGKSAIVKYSNKKKEKSALALFCLDLTMRASGGLIDPVIGRKDEIERVVQIICRRTKNNPILLGEAGVGKTAIAEGLAHKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARVTSLIREVRKAGDVILFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGELQCIASTTLDEHRLHFDKDKALARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTLESINAAVYLSARYIADRHLPDKAIDLIDEAGSRARMESFKRKKEEQCSILSKSPDEYWQEIRAVQNMHEVALTNKVKYSLNQNDQEDAVDIELVGEDKTSPASMLSTSTDKPSLVGSEEIARVTSLWSGIPVQQLTADERKLLVGLDDELRKRVIGQDDAVLAISKAVKRSRVGLNDPDRPIATLIFCGPTGVGKTELTKALAASYFGSESATVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISNGKRSIGFQTQTDTEEKSYAAMKSLVMEELKAFFRPELLNRIDEVVVFHPLEKTQACCFYRYCTCILPCTFVNTMLAILNIMLQEVKGRILALGIGLEVSDSMKDLISQHGYDKSYGARPLRRAVTQLVEDVISEAILSGQFKPGDTIMMDTDATGKPCLSRLNDQTVQLSDPTPTL</aaseq>

Gene Sequence

<dnaseqindica>1..593#1119..1288#1384..1613#1722..1830#1921..2051#2713..2814#3009..3290#3399..3520#3603..3897#3991..4224#4372..4662#4870..5181#ATGGAGGCGTGCTGCTGCTCGTCGTCGTCGGTGCCGTCCGCGTCCATCCTCGCCACGGGCGCCGGCCTCCGCCGCCGGTTCTCCCCTGCGGGGGCCGGCGGGGGTGGGAGGGCGGTGGCGGTTGCGGCAGGGCGACCGATCCGCGCGTCCGCGGCTCTGCTGGCCGCGCCCGCGCCGCGGCGGCGCGGGGGCGTCGTCGTGAGGGCGGTGTTCGAGCGGTTCACGGAGCGGGCGGTGAAGGCGGTGGTGTTCTCGCAGCGGGAGGCGCGCGGGATGGGGGACGAGACGGTGGCGCCGCACCACCTGCTGCTGGGCCTCGTCGCGGAGGACCGGTCGCCGCTGGGGTTCCTCGCCTCGGGCGTCCGCGTCGAGCGCGCCCGCGAGGCGTGCCGCGCCGCCGTGGGCAAGGAAGGGCTCGCGCAGGCGCCGGTCGGGCTGGCCACGGACGTGCCCTTCTCGGGGGCCAGCAAGCGCGTCTTCGAGGCCGCCGTGGAGTTCTCCAGGAACATGGGATGCAACTTCATCTCGCCGGAGCACATTGCGCTCGGCCTCTTCAACCTGAACGATCCCACCACGAACAACGTCCTTAAGAGGTTTGTGGTGATGTTCTCCTGTTCCATGTTTTCTCAAAAAAAAAAAAAAGCTTCCATATGATCCGCGATAGTGTGGTCAATGCATCAACCACCTACGACCTTTTCATCGGCCAGTAAACAACAAACGATATTTTGGAAGTTTAGAGATGTGTATGCTCACAAACTAGAAAAATTAAGGCATCTTTATATACCATTAGCTAATTCATTAGCCATGCAACCTGAAATGTAAATGAATTTGCACATCAGCAAGCTCACGTTGCGATGGATGTGGACTTCGCTAAGGATTTCCACTTAATAAAGAGAAAAATAAATAATTAGTGTACTTTTGCACATTTAGGGGTGTGCTTGGTCGAGGACGGTTGCTTTAGGAGTTGGGGTTTAATTCCTTAAAATCCTATAAACTTATACAATTCATCCCCGCTTAGTGTAGTTAATACCAATTCTCTGCATTCTCGTTTTGAATACAAATCCCACCACTAAACTTTCATTGATTTTTTTTTCCTTTTACAATGATTGTCATTTTAGCTTAGGAGTAGATTCAAGTCAGCTAGCAAAGCAGGCACTTACCCGAGTCCAAGGGGAGCTTGCAAAGGATGGAAGAGAGCCTGTCGGATTATCTTCTTTTAAAGTGCGTGAGAAATTTACTCCTGGAGGTGGGAAGTCTGCAATTGTCAAATACTCGAATAAAAAGAAAGGTCTGGTTTGACATCACTTTATTGAACTAATAGCTAGTACTATTCTTGATAGCACAGATGTAGAAAGGATGAACTTGCTCTTATTGTTATTTCAGAGAAGAGTGCACTGGCTCTATTTTGTCTAGACTTGACCATGCGAGCCAGTGGAGGATTGATTGATCCTGTTATTGGTCGCAAGGATGAGATTGAAAGAGTAGTTCAGATTATATGCCGCCGCACGAAGAACAATCCAATTCTTTTGGGCGAAGCAGGTGTTGGTAAGACTGCCATTGCTGAGGGTTTGGCCCATAAAATTGCCAATGGAGATGTTCCTATTTTCCTCGTGGTAAGTTTTAGCTACAAGAGATGGATACAATCATGTTGGTTGCATAATTTTGCTTGCTCGATTGTACTTAATACCTGATAATTACCATTCATTGACATGGTTATGTAGGGAAAGCGTATATTATCATTGGATGTTGCTCTACTAATGGCTGGTGCTAAAGAGAGGGGTGAACTGGAAGCCAGAGTTACTAGTTTAATACGTGAAGTGCGCAAAGCAGGTTATCTGACATTCTGACTTGATGCATTACAAGATCCAAAACTTCCGTTCTTGGTCTTCAATCTTCAAAGAGCTCCAAAGTTTCATGCAGGTGATGTTATACTGTTCATTGATGAAGTCCATACTCTTATTGGGTCTGGGATTGCTGGAAGAGGAAGCAAAGGAGCTGGTCTTGATATTGCGAATTTGCTGAAGCCTGCACTGGCTAGAGGAGAATTGCAGGTATATGTCATGAAAAGGCATCCTCAATCCATGTTGCCCATTTTGTTTCTCAAAACTACTTGATTCTTTTCTGGATTAGCAGCAATTGGTGCCTGGGTTTGCATCATTTTACCTACTGTCTAGGTGAATATCTATTTATCTAGTGGTGTGGAATGGCTAATTTAGTGCAGTTTCCAAACAGAAATAATAGATAAATATAATTCAATAGGTAATCCCTTAAAAATAAAGGTAAATATGCCATACATGTGTTCCATTATTTGTATGATTGAAGTATTATGAATACCACTCTACCTGCAACCTGTTGACATACAACAATACTTATGCACATCCTATTTATATTCAATTCTTTTTGTTAAAATAAGTTGCAATATATCCAAGTAACACTTGGTGCTAGGGCTTCAGTATTTAACTGACCCTTTCAGTACTGCTACACACACTCTTGATGTCCTTCCATGTGCACTTGAGGGATATTCCTTTGAAGAAGGATGTCTAGTCTCTAAAATGTTCATTAATATCATGGACATGATCTGTATGGACAACACCCGCTGTGAAGTATAATGGATTATTTTTGGTCATCTGCAATTGAGTGCAAAGTGTTCTCTACTATAAAAGGAACCAAGTTTATTTGTCCTTTCCCTATTGTGATGTATTTTTTTCGCAGTGTATTGCATCTACAACTCTGGATGAACACCGATTGCATTTTGATAAGGATAAGGCTTTGGCTCGCCGATTTCAGCCTGTTTTGGTGAATGAGCCTAGCCAGGTAATACAAATTTCAATTTCAGAAATCACTTGTCTCTTAGGGTTACCTTTCACTCAATCATTATCTCAATCTCTTGAACTCTCTGCTCTTGGGGATACCTTTCACTTGATCATTATTTCAAATCTCTTGAACTCTCTGCTCTTGGGGTTACCTTCCACTTGATCATTATTTCAATTCTCTTGAACTCTCTGCAGGAGGATGCTGTGAAGATATTACTTGGTCTGCGTGAGAAGTATGAGACCTATCACAAATGCAAATACACTTTGGAAAGCATCAATGCAGCAGTTTATTTGTCAGCAAGATATATTGCTGACAGACATCTTCCCGATAAGGCCATTGATCTAATTGATGAAGCTGGCAGTAGAGCTAGGATGGAATCATTTAAAAGGAAGAAGGAGGAACAATGCTCTATTCTCTCAAAATCACCAGATGAGTACTGGCAAGAGATTAGAGCTGTCCAGAACATGCATGAAGTGGTAATAGAAGATTAACAATACTCAATATGCTGTTGCAAAGATTTTTTTTTTGTTGATATGCTGATAGATTTTCAATGAATTAATATTTCATTGCCCACCACTTTTCAGGCACTGACTAACAAGGTAAAATATTCTCTAAATCAGAATGACCAAGAGGATGCTGTTGATATTGAACTCGTGGGTGAGGACAAAACAAGTCCAGCATCTATGCTATCAACTTCAACTGATAAGTAGGTTCTCTTTTGTCATCCAGACTAAACTCCCCATTCTGCAATCTAAGCACATAATATTTACAATACATTTACAATGCAGACCATCTCTGGTTGGATCAGAGGAAATTGCAAGAGTCACATCATTGTGGTCAGGCATACCAGTTCAGCAGTTGACTGCAGATGAAAGAAAGCTTCTAGTAGGACTGGATGATGAACTCAGGAAACGTGTCATAGGTCAAGACGATGCTGTTCTAGCCATATCTAAAGCTGTGAAGAGATCGCGTGTTGGCCTCAATGACCCTGACAGACCTATTGCTACACTAATTTTCTGTGGCCCAACAGGTGTTGGAAAAACTGAGCTCACGAAAGCTCTAGCAGCAAGTTATTTTGGATCTGTGGGTCACTCTTTGCTGGTTATATCCTTCTAATACTATTGAGTTCACAACATATTTCGTTGTTTTGAAAATGTTGCTTCTTTCATTTCACAGGAATCAGCTACTGTTAGGTTAGATATGAGTGAGTATATGGAGCGGCATGCTGTGAGCAAGTTGATAGGCTCTCCTCCAGGATACATGGGATTTGGTGAAGGTGGTACTTTGACTGAAGCAGTCAGGAGAAAACCATTCACTGTGGTGTTGCTTGATGAAATAGAGAAAGCTCATCCTGATATTTTCAATATTCTTCTTCAAATATTCGAAGACGGTCATTTGACTGATTCACAGGTACTAGATATGAGATTTGTGATCTCATATCTGCAAATTATGCTGCATACCTCATGCCTTGTCTATGAAATCGAGCATTTTGAATACTCAATAATATGATTGTCATGCCTCATCATCTTTATGCTAACTCTCAAATGTGAATTGCAGGGCCGGAGGGTTTCCTTCAAGAATACATTAATTGTGATGACATCAAATGTTGGTTCCACATCAATTTCTAATGGAAAGAGGAGCATAGGTTTCCAGACACAAACTGATACTGAAGAAAAGTCATATGCTGCAATGAAATCTTTGGTAATGGAAGAACTGAAGGCATTTTTCCGTCCCGAATTGCTCAATAGAATTGATGAAGTGGTTGTGTTCCACCCTCTTGAGAAAACTCAGGCATGTTGCTTTTATAGATACTGCACTTGCATATTGCCTTGTACTTTTGTTAATACTGTGAGTTTAGAAATGCTACCACTCCATAACGAAAACAAACAAAATATTCATCTTGTTGCGATACCTTTTGCTCACATAGAGTAGAATCGCCCTTATATCCGTTCCTTCTGTTCCCTTGTAGCACGTTGTGCTATAAATTTCTACATGTTCAGGCAACCAACGCAAATGCCTGATGTAAGCCACTGACACTTGCCTGACAATTTGCAGATGCTGGCTATTCTCAATATAATGCTGCAAGAGGTGAAGGGTAGGATTTTAGCCCTTGGGATTGGCCTAGAGGTGTCTGATTCCATGAAGGACCTGATTTCTCAGCATGGGTACGACAAGAGCTACGGTGCACGGCCACTAAGAAGAGCCGTCACTCAGCTGGTTGAGGATGTTATCAGCGAAGCAATTCTGTCTGGTCAGTTCAAGCCTGGTGACACCATAATGATGGACACTGATGCCACGGGGAAACCTTGCTTGAGCCGACTGAATGATCAGACCGTCCAATTATCCGATCCGACACCAACACTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016335

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016335&oldid=65229"