BGIOSGA016339

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Revision as of 04:27, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016339| Description = Os04g0405800 protein| Definition = Oryza sativa Indica Group BGIOSGA016339, complete gene.| tag = OS04G0405800| tid ...")
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Gene Name

BGIOSGA016339

Description

Os04g0405800 protein

Definition

Oryza sativa Indica Group BGIOSGA016339, complete gene.

LocusTag

OS04G0405800

Ensembl Transcript ID

BGIOSGA016339-TA

Ensembl Protein ID

BGIOSGA016339-PA

Length

2891

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:17912976..17915866

Sequence Coding Region

17912976..17913143,17913292..17913764,17913852..17913996,17914072..17914125,17914212..17914303
,17915135..17915370,17915504..17915677,17915769..17915866

Genome Context

<gbrowseImage1> name=IndicaChromosome04:17912976..17915866 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:17912976..17915866 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCTGCGACGACGACTTCGGTCTCCTCGGTGACGGCCCCGTCCCCGAGGAGGAGGCGGCGGCGGCGGCGGCGTCGTCGCAGGCCGCGCCGCCGCCGCCGCAGCAGCAGGCCCAGGCCTTCTGCTTCGGCGATGCGGCCTCGGTCGCCGGGGCCGGGGCGGGCCGGCGGAGGTGGCGGCGGCGCGGGNAGAAGGGCCGCGGCGGGGGCGGCGTTGGCGGGGGCGGGGTCGCGGCCGGCTCGTCGGAGTACCGCAAGGACCGGGAGGAGTGGACGGACGGCGCCATCAGCAGCCTCCTCGACTCGTACACGGACCGGTTCGAGCAGCTCAACCGGGGGAACCTGCGGGGTCGGGACTGGGAGGACGTCGCCGCCGCCGTGAGCGACGGGCAGGGCAAGAGCAGCGGGGGCAAGAGCGTGGAGCAGTGCAAGAACAAGATCGACAACCTCAAGAAGCGGTACAAGGTGGAGTGCCAGCGGCTCGCCGGCTCGGGGGCCTCTGCCGTCAGCCACTGGCCCTGGTTCAAGAAGATGGAGCAGATCGTCGGCAACTCGTCTTCTCCCGCTTCCTCCAAGGCGTTGGTGGCCTCCGACGACGACAACAAGCCACGGCAACCGCAGCAGCATAGCAGCAAAAGGCACGCTCCTTCTGGCAGTAGCACCCCCACCTTCGGCGGCAGCTCCAGATTGGCCCCTCCATCAAATCCAAAATGGAAAAGGGTGCTTCTCAAGATTGGGGGCACAGCATTGGCTGGAGCGCCTCCTCAAAATGTTGATCCTAAGGTAATTATGCTGATTGCCCGAGAAGTTCAAGTGGCATGCCGCCATGGTGTTGAGGTGTCAATTGTTGTGGGAGGTCGGAATATATTCTGCGGCGACACTTGGGTTTCTGCAACGGGCACTGATAGAGCTTCAACATACTCAATCGGGATGATGGCATCAGTGATGAATGCAGTACTGCTCCAAGCGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAGTTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTATCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTGCCTTGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACGATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGGAGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAAATAATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTTGTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAA</cdnaseq>

Protein Sequence

<aaseq>MASCDDDFGLLGDGPVPEEEAAAAAASSQAAPPPPQQQAQAFCFGDAASVAGAGAGRRRWRRRGXKGRGGGGVGGGGVAAGSSEYRKDREEWTDGAISSLLDSYTDRFEQLNRGNLRGRDWEDVAAAVSDGQGKSSGGKSVEQCKNKIDNLKKRYKVECQRLAGSGASAVSHWPWFKKMEQIVGNSSSPASSKALVASDDDNKPRQPQQHSSKRHAPSGSSTPTFGGSSRLAPPSNPKWKRVLLKIGGTALAGAPPQNVDPKVIMLIAREVQVACRHGVEVSIVVGGRNIFCGDTWVSATGTDRASTYSIGMMASVMNAVLLQASLEKIGVETRVQTALMMQEVAEPYIRRRAIRHLEKGRVVIFAGIGAGIGNPLFTTDTAAALRASEINADVVLKGTAGDDDYGCPPRGNNNPPFEHISFRELAARGFSRMDMTAITCCQENNIPVVIFNMLEPGNISKAICGDQVGTLVDQSGRIT</aaseq>

Gene Sequence

<dnaseqindica>1..168#317..789#877..1021#1097..1150#1237..1328#2160..2395#2529..2702#2794..2891#ATGGCCTCCTGCGACGACGACTTCGGTCTCCTCGGTGACGGCCCCGTCCCCGAGGAGGAGGCGGCGGCGGCGGCGGCGTCGTCGCAGGCCGCGCCGCCGCCGCCGCAGCAGCAGGCCCAGGCCTTCTGCTTCGGCGATGCGGCCTCGGTCGCCGGGGCCGGGGCGGGCGTGGGCCCCTTCGCTCCGATGGGGCAGGAGGAGGGAAACCACAGCGCGGAGCGAGAAGGCGGCGGCGGCGGCGGCGCACCACTCCAAGCGGGGGAGGACCGGGCGGAGAGTTCAGCGATGGGGGAGAGTACTGCTCCTACCTCAACAGCGGCGGAGGTGGCGGCGGCGCGGGNAGAAGGGCCGCGGCGGGGGCGGCGTTGGCGGGGGCGGGGTCGCGGCCGGCTCGTCGGAGTACCGCAAGGACCGGGAGGAGTGGACGGACGGCGCCATCAGCAGCCTCCTCGACTCGTACACGGACCGGTTCGAGCAGCTCAACCGGGGGAACCTGCGGGGTCGGGACTGGGAGGACGTCGCCGCCGCCGTGAGCGACGGGCAGGGCAAGAGCAGCGGGGGCAAGAGCGTGGAGCAGTGCAAGAACAAGATCGACAACCTCAAGAAGCGGTACAAGGTGGAGTGCCAGCGGCTCGCCGGCTCGGGGGCCTCTGCCGTCAGCCACTGGCCCTGGTTCAAGAAGATGGAGCAGATCGTCGGCAACTCGTCTTCTCCCGCTTCCTCCAAGGCGTTGGTGGCCTCCGACGACGACAACAAGCCACGGCAACCGCAGCAGCATAGCAGCAAAAGGTGGCTCCTCCTTTGCATCTTTGGCGTTGATTAGTTCGGGGATCTGATGGTCGTAGTGACGAACTAATGCTTTGCATCGCATCGCAGGCACGCTCCTTCTGGCAGTAGCACCCCCACCTTCGGCGGCAGCTCCAGATTGGCCCCTCCATCAAATCCAAAATGGAAAAGGGTGCTTCTCAAGATTGGGGGCACAGCATTGGCTGGAGCGCCTCCTCAAAATGTTGATCCTAAGGTATTTTGTTAGCTATGCGTCCACCCAGTCTGATGCTGTCCTGAATTTTCACACAAAACTTTGTGATCTTGCCAGGTAATTATGCTGATTGCCCGAGAAGTTCAAGTGGCATGCCGCCATGGTGTTGAGGTAAATGAAAACACATCAACTCTGGAGATACTTTTTACCGATTGCAATCAATGATTGCCGAATTAATATTACTTTGGTCCAATCAGGTGTCAATTGTTGTGGGAGGTCGGAATATATTCTGCGGCGACACTTGGGTTTCTGCAACGGGCACTGATAGAGCTTCAACATACTCAATCGGGTAACTTCCTCAGAATCAGTGTTGTTGTAAACAGTTAACACTCGTTTTCATTATTATTTGCTATCAATGTTTGTCCTGCTTGTGTTCTACTCTTTCATGCTACTGTACCATGAAGGTTTTGGAAGGTCATGATCGCCAGAATGTGAACAAAAATCCCACTTTGCCAGCAAATAAAATTATTTACAGAACCTTCTTGATCATATTCCCTTCCCATTGCACTGATTGCCTGATTGGTCAAAGACTGGCTGCCTTTGGATGCTAGTAAAACCTCTTTGGAACTGTTTGCATTCTTGTTGTGTATCATGTATTTGTGACTGGCTGGAAGTCATTAGAGGCATGCTGCCATGGTAATTTTTTAATGTCCGTGGGGTAATTGAGCTAAAGCCTAAAGGACTACAGATGCTTGTTTAACTGATTGGACTTCACTATTACCAGTATAATTCATTGATCATACAATTGGACAGTTCTTTGCAGTTGCTAATCCAGAGCAGACTACTAAGCTCAGTCTCTACATTAAACCTCCATGCTATTGTTTTGATCCATTTCGAAATTGGGTGATGTGATGCAGTCAAGCAGATGCAGCATTGGTCCCAAATAGTCCTTTTGATAGTTGCATGATGTTTTGTATCCTGATCTTCACCATGCACATTCCTTATATGTATCTAATGAACACCAGAATTGGTAGCTCCAGTTCAAGCACATGTGGTACGATCAGTAATTAGGCACAGATTATAACTTAGAAATGACCAATGGAATCATGTTTTCCTTTGACATGATGATCTAATTTTGCTTTATCTGTTTATTTATGCCAGTCTCTTTGAATTTTGTCAGGATGATGGCATCAGTGATGAATGCAGTACTGCTCCAAGCGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAGTTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTATCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTGCCTTGAGAGCTTCTGAAAGTATGTTGCTGAAATTCCCTCCTAAAGCGGCTTCTTGTGGCTTTGGTTAATGAGCTTGAATTGACTGTTCCCATTTCTTAGGTGTGATTATTTTTGCATTGACATATATCTGATTAGATTTGTTGTCAACCAGTCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACGATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGGAGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAAATAATATTCCTGGTCAGCCTCCATGCACTAGCCATTACAAAGTTGTGTTCTTATTGTTTTTGCGGTGTTCATAAGATGATTTTTATGTGTTCATTTCTTGCAGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTTGTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016339