BGIOSGA016344

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Revision as of 04:28, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016344| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016344, complete gene.| tag = H0321H0...")
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Gene Name

BGIOSGA016344

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016344, complete gene.

LocusTag

H0321H01.12

Ensembl Transcript ID

BGIOSGA016344-TA

Ensembl Protein ID

BGIOSGA016344-PA

Length

5067

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18039968..18045034

Sequence Coding Region

18039968..18040004,18040733..18040845,18040939..18041056,18041754..18041828,18041891..18042110
,18042303..18042366,18043089..18043181,18043260..18043368,18043654..18043703
,18043777..18043867,18044102..18044172,18044421..18044519,18044683..18044749
,18044949..18045034

Genome Context

<gbrowseImage1> name=IndicaChromosome04:18039968..18045034 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:18039968..18045034 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGGAGAAAGACAGGATAGCCTACTTCTACGATGGCGATGTGGGCAATGTCTACTTTGGGCCAAATCACCCGATGAAACCACATCGACTTTGTATGACACATCATCTTGTGCTTTCATATGATCTTCACAAGAAGATGGAGATATATAGGCCCCACAAAGCATATCCAACAGAGCTCGCACAGTTCCATTCTGCTGATTATGTGGAATTCTTGCATCGGATAACTCCTGACACCCAACACCTGTATGAAAATGAATTACGTAGATACAATCTTGGAGAAGACTGCCCAGTCTTTGATAATCTGTTTGAGTTTTGCCAAATATATGCTGGAGGAACTCTAGATGCGGCTCGCAGATTGAATCATAAAACATGTGATATTGCTATCAATTGGGCTGGTGGATTGCATCATGCAAAGAAGTGCGAGGCATCAGGGTTCTGCTACATTAATGATCTGGTTTTGGGAATTCTGGAGCTTCTCAAGTACCATGCCAGGGTTCTCTATATTGATATCGATGTTCATCACGGGGATGGAGTTGAAGAAGCCTTTTATTTCACTGACAGGGTAATGACTGTAAGTTTCCACAAGTATGGTGATTTTTTCTTCCCTGGCACAGGTGATATTAAGGATATAGGAGAAAGAGAAGGAAAATATTATGCCATTAACATTCCACTTAAAGATGGGATAGATGACTCCGGCTTTACTCGCCTTTTTAAAACAGTTATTGCCAAAGTTGTTGAGACATATCTGCCAGGTGCTATTGTTCTTCAATGCGGGGCTGATTCCTTGGCACGGGACCGTCTGGGGTGCTTCAATCTGTCCATTGAAGGCCATGCTGAATGTGTGAAGTTTGTCAAGAAATTCAATATCCCTCTACTGGTGACTGGGGGTGGTGGATACACAAAAGAGAATGTAGCACGCTGTTGGGCTGTTGAAACTGGTGTTCTTCTAGATACGGAGCTCCCAAATGAAATTCCAGACAATGAATACATCAAATACTTTGCTCCAGATTATACATTGAAAGTATCGAATGTGAACATGGACAACTTGAATAGCAAGTCATATCTAAGTTCAATCAAAGTGCAAGTCATGGAGAGTTTGCGGGCCATACAACATGCGCCTGGTGTTCAGATGCAAGAGGTTCCACCAGATTTTTATATCCCAGATATTGATGAAGATGAGCTGGATCCTGATGAACGTGTAGATCAGCATACCCAAGACAAGCAGATTCATCGCGATGACGAGTACTATGAAGGTGACAACGACAATGATCATGAGGACGGGGCCCGTTGA</cdnaseq>

Protein Sequence

<aaseq>MLEKDRIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPTELAQFHSADYVEFLHRITPDTQHLYENELRRYNLGEDCPVFDNLFEFCQIYAGGTLDAARRLNHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDFFFPGTGDIKDIGEREGKYYAINIPLKDGIDDSGFTRLFKTVIAKVVETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLLVTGGGGYTKENVARCWAVETGVLLDTELPNEIPDNEYIKYFAPDYTLKVSNVNMDNLNSKSYLSSIKVQVMESLRAIQHAPGVQMQEVPPDFYIPDIDEDELDPDERVDQHTQDKQIHRDDEYYEGDNDNDHEDGAR</aaseq>

Gene Sequence

<dnaseqindica>1..37#766..878#972..1089#1787..1861#1924..2143#2336..2399#3122..3214#3293..3401#3687..3736#3810..3900#4135..4205#4454..4552#4716..4782#4982..5067#ATGCTGGAGAAAGACAGGATAGCCTACTTCTACGATGGTACGACCGCGCATTCGCTAAGCCCCCCTCATCTCCTCTCCATTCTCCCTAATCACTGGAGCAACCCTAGCTCTAGCTCTAGATGATAGAGCGAAATCCTACGCCGTCTCGATGTTGTGTGGCTTAATTTCGTCGAAGAAGGGGCATGCAATTAGTACCTAAGCTGATTTCTAGTGGTGTTATATGATTGTGGAGGTTGGAGTGGATGTTACGGTTGGACGGCTTATGAGAAATTCCAGAACTATGAACTTCCCAGGACTTGTTCAACTAGGATTTGTGGTATTTCAGTTGCCCTAGCCCTAGGTGCATGACGCATGATTCATTATCAGTCAGTAACATAAGGTGGGGAAGCAACCCTTGAATCAAGATTTGAATTAGAATCGTTGATCCCTTTATCTGTTTAAGAGGGCGCAGTCAGGCTAGATTTGGTTAACAAGTTCCTATATTCTTTAGCGCCAGCCATTTTCTAAAAGGTCACCAACGCCAGCCATATGTGGTTATTTCTTAGATCACACATAAATTTCCATGATAAGTTCTCTCACATATTTTGTACTAGGTGGTTTCATGACTTGTGCCCTCATTCACCCATGGTCCTTTACATCTCTGTTTATAGAGAGCCACTCATTTTGCAGATGTGAAAGGAAGTTTTCATTGTTCAAAATGTGTAATTTTTATTACTCATTTTGTTTTGATCGTTTACCTTTTTACTGTGTCAATGAACAATTCAGGCGATGTGGGCAATGTCTACTTTGGGCCAAATCACCCGATGAAACCACATCGACTTTGTATGACACATCATCTTGTGCTTTCATATGATCTTCACAAGAAGATGGAGATATATGTCAGTATGAACTTTATTTATTCCCTTCGTTTGCACTTGTTAACTGCCTAAAGTTCCTTTCACCTCTTACTTTTCACACAACGATTTATGCAGAGGCCCCACAAAGCATATCCAACAGAGCTCGCACAGTTCCATTCTGCTGATTATGTGGAATTCTTGCATCGGATAACTCCTGACACCCAACACCTGTATGAAAATGAATTACGTAGATGTATGAATTATGAAACTTTTCTCCTCTATGAACTAGTACTCTGGGATTTGTTAATTTTACAATAAAATAAAATGGTTGTCACATATCTTGCTACTCATGTTTAAATTATTATAAATTTATTTATTAAGTTCCTTACCTGGATCTAATAAGTAGCTTAGATCTTCATGTACAGTTAAACTATAAGGAATCTCATACACAACTTAAGGCTAATTAGCTTCATTTACATGAATGCTGTCAGGTGTATATTCACGATATGCCTATTTGACAATTCAAGGAAAATGAGGGCATGTTTGGTCCCCTTTCAAGCTCAAGCAACTTCCCATCTAACGCTGCCTAGATAGCGTTGGTGTTTAGTACAGCTTAGCGAGTCATTCGTCATAGGATGTATATCCTTGCCCATTGAAGCGCATCCCTTGTGGTCAAGGTTTACATGATTTGGTGCACTAAATAGTTTTGGATATCTTTACAGTATTTTATATAGTATTAGTTGCACTCTTCTAGGACACATGTGCTTATTTTACAGTTTCAGGGCAAAATAACTGAACACCTAACCTAAGTAGCAGAGTAATCTGGACAAAAGATCCAACTTACCCACTCTTAGAGCTTTTCCCCAATTGAAGTTGGTTTCCAACATAATCCTCATGCCTTTTGGAGCTTTCTAACTTCATTTATCTGGTTCCTTCATATTTGTTCCCAGACAATCTTGGAGAAGACTGCCCAGTCTTTGATAATCTGTTTGAGTTTTGCCAAATATATGCTGGAGGAACTCTAGGTAATATGAAAATTCTGAATGCTTCTTTCTAAAGTGAACTCTTAAGTTCTTTGCTATTTTAGATGCGGCTCGCAGATTGAATCATAAAACATGTGATATTGCTATCAATTGGGCTGGTGGATTGCATCATGCAAAGAAGTGCGAGGCATCAGGGTTCTGCTACATTAATGATCTGGTTTTGGGAATTCTGGAGCTTCTCAAGTACCATGCCAGGGTTCTCTATATTGATATCGATGTTCATCACGGGGATGGAGTTGAAGAAGCCTTTTATTTCACTGACAGGTTCATGCTGTTTCCAATAAAGTCATGGATATGTAGTTAATCATTTATTGCTGCCAATATTTTTCCAATCCAATTTCCATCTCTGTGCATTTTGTGAATTTTGGTGGTACCATAATATTTATACTAATTCCAGTCTCGGGCTTTTGATTTTGCAGGGTATACTAATATTGTATACTTATTTTGATTTTGCAGGGTAATGACTGTAAGTTTCCACAAGTATGGTGATTTTTTCTTCCCTGGCACAGGTGATATTAAGGTAATGTTCCACTAACAAGCTCCTGAATATTTTTTATGTACTTTTTGGTATGATGTGGTTGGTGATTGGCCCTTCTCTGCATTCTGTTTTATCCTTACCCTTTTCGCATGAAGTGTGTGTGACATGCGTACTCTCATTTGTGTGAAAAAAGAAGAGACAGATTAACCAAAGATGGTCCCCAGTTGATTTTGTAATGCACAAAATTGATAGCACCTGTAGGTAATTGTTTATGAGCAGTTAATCTTGTTTCTTTTTAGTTCTACCCGCCAAGAGGCTGTAAATATGTAACATCATAGAGTTGAACTTTGGTTTTTTTTACTGGAGATTCTTGGCATGTTATTCTATTTAAATATCAACCATTGTAATTGGGAATTCAGGTGGTTATGTATTTGAAAAACGTCATACTAGAAAGCATCATAATTCGTATACGCATGCTTAATTGTCATCTGGGCTGACAAAAAAAAAACATGTGCACATATACGCCCATCATTTGAATCTTGTAGTATGTTAATTTGTTATGTATCCACTGTACTACTAGGCAACTTTATTAAATAAAAATATCCCAAATAACTGGAAGGTAGAGCAAGTGTGCTACAAAAAGGGCAAGGTTGAAAATGAACATAAAACATGCCATGTTCTTCTCAGTAACGATGATACTTTATATAGCTTCGTTTTAAATGATTGTGCTGCTTCATATTGATTTACCTGACTCTCATTTGAAGGATATAGGAGAAAGAGAAGGAAAATATTATGCCATTAACATTCCACTTAAAGATGGGATAGATGACTCCGGCTTTACTCGCCTTTTTAAAACAGTAAGCCCACTTTACATTACTTTCTCATCTTTCATGTCATTGTTTAGTCTTATCAAGTTATGCATGTCTATTATGTAGGTTATTGCCAAAGTTGTTGAGACATATCTGCCAGGTGCTATTGTTCTTCAATGCGGGGCTGATTCCTTGGCACGGGACCGTCTGGGGTGCTTCAATCTGTCCATTGAAGGTTCTGTACTTCTTAAATCTGATGTGTACTTGTTGATTCAGCAGAACTGTGCTCTAGATGTAAAGTTAGTGAACTGTGCTGCATATTCTTGGATGAGCTATTAGGGTTCAGGCGGTATCTTCGAGATAATGTGAAACCTTCTCTCAAGTCTCAATTATTTCTTACCATAGTTTTGAGATTGTTATTGCACTAATAGTTCTGACTTATTTTGAAATTTAAATTTTGTTTCTTTGAGCTATACTTAGTGAATGATCTTTTAATACTTGCATGTGTACTTGCAAACAGGCCATGCTGAATGTGTGAAGTTTGTCAAGAAATTCAATATCCCTCTACTGGTAAGGAGAAACCGTTACTGCGTGTGATTTCTCTTGTTCCTCCTTGGATATCAATGTATTTCTCATCATGCAGGTGACTGGGGGTGGTGGATACACAAAAGAGAATGTAGCACGCTGTTGGGCTGTTGAAACTGGTGTTCTTCTAGATACGGAGCTCCCAAATGGTATTCTTTTCTTTTGCAATTCTGTACTTCTCGGTCCTTTTGGCCTGTTGTTTTAGAGGACACTACTAGTAATCCCTCAAATGCATGCAACAGTTCATGTATTCTTTTCCTCACATTTGCTGGCATATCAAGTTGCAAACAGATCTATCAAGAACGGGATTGACTAGTAGAGTTCCTTAATAATTTCTAAAACAGCAGTCTGTGATATGAGTTTTGCATGACTTTCCTTTGCAGAAATTCCAGACAATGAATACATCAAATACTTTGCTCCAGATTATACATTGAAAGTATCGAATGTGAACATGGTATGGAACCTTTTCTCATTGGCCTTTGTTTGTCCTACGGTTGTTTGGTGCATTGATATTTGATTGCTATTAGGTGCATCAAGTAACTGTCCTTTTATTACTGAGTATGGTCTAAGCATTTGAGCTCTGTAGTCCATTTGGTATTTCGGCTATTCAATTGGTTTGTGTTTGCTAGAAGTTTAGAACTTGCGTTCCTTTCTTGAGAATGTGCAAATGCCATATCACATGTTGTGTTTTAACCGGAGCAGGACAACTTGAATAGCAAGTCATATCTAAGTTCAATCAAAGTGCAAGTCATGGAGAGTTTGCGGGCCATACAACATGCGCCTGGTGTTCAGATGCAAGAGGTTAGTTTTTGATTCACTTACACGAGGAAACCTCCCAACTGGAATTTGCTATGTAAAAAAAAGGGATACAAGCAGGACACTATAATATTCCTTTCCTTTTGTTGCCTATCTTTTTCTTCGTTCGACATATTTCTGAACAAGAACATTATTAACATTTTTGCAGGTTCCACCAGATTTTTATATCCCAGATATTGATGAAGATGAGCTGGATCCTGATGAACGTGTAGATCGTAAGTGAAATACTCCTGGGATGCATTAGGATGCTAATATGTCTGGGTGTCTGCTGTTCCAAGAAAACGAACGGCAGACAGTTGTTTTTTTTAGTATATGTTGTGTGTTCCACATTATGCTAGTCCTTTCTTCGTGTTGTTTTCAGACCTTTGAACTTTATATCGTCCTTATACATTAACTGTGTAAAATGTTGCGCAGAGCATACCCAAGACAAGCAGATTCATCGCGATGACGAGTACTATGAAGGTGACAACGACAATGATCATGAGGACGGGGCCCGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016344

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016344&oldid=65238"