BGIOSGA016346

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Revision as of 04:28, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016346| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016346, complete gene.| tag = H0717B1...")
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Gene Name

BGIOSGA016346

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016346, complete gene.

LocusTag

H0717B12.1

Ensembl Transcript ID

BGIOSGA016346-TA

Ensembl Protein ID

BGIOSGA016346-PA

Length

2618

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18070259..18072876

Sequence Coding Region

18070259..18070265,18070776..18070925,18071014..18071087,18071173..18071291,18071966..18072049
,18072771..18072876

Genome Context

<gbrowseImage1> name=IndicaChromosome04:18070259..18072876 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:18070259..18072876 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGTCGATAAGCAGGAATCGATGGAAGAGACCATTCTTGTTGGTGATGATCTCATGCGTGGGTTGCCATCCCCTGTCATACCAAAGGAAATTGCTTCACATGTCCTTGACGGTGTTGAGATTTGTGATGGCATACTCAAAAATCTTTTCTTATGTCTGCAAATCAATGATATTGAGCCGTTTTGCCAAGATGAAATTGTACTATACCGACAATGTGCTGAGAAAAGGGACAAGGAAATAAGAGAGCGGCTGCAGGATAGTGAATATAAGCTGGGTTTTTCAATGCCCCTGGAAGAAGCTAAGGAAAGAGCTACCCAACTCCAATCAGAAATCACACTGCTTGAAAGGCGCATGATTCTTGCTAGTGGACTTGAGGGCATGGAAGGATTTCGCCAAAGATGGAGCTTACATGGACAGCTTGGAGACACAAGGAAAAGGTTGGAAGCGCTGAACAGTGGAATCGTAAAAAGAGGGAGCCAAAGTTCTCCAGTGAAAGAGACAACTCCTGCAGTCAGGAAGAGGTGGTTCCTTTGGTAG</cdnaseq>

Protein Sequence

<aaseq>MDVDKQESMEETILVGDDLMRGLPSPVIPKEIASHVLDGVEICDGILKNLFLCLQINDIEPFCQDEIVLYRQCAEKRDKEIRERLQDSEYKLGFSMPLEEAKERATQLQSEITLLERRMILASGLEGMEGFRQRWSLHGQLGDTRKRLEALNSGIVKRGSQSSPVKETTPAVRKRWFLW</aaseq>

Gene Sequence

<dnaseqindica>1..7#518..667#756..829#915..1033#1708..1791#2513..2618#ATGGATGGTACGCACGCGCTGGCTCTGTTGCCCATTCCCATTTCGTTAAGCTTTGTTTATTTTGTGTCAGTTGGGGAAGTAAATCTTAACAAAACTTGGTCATCCTCTCTTGCCCAAACCGCCTAAAAAGTTTGGAGGATCAAATTGTGTTTTAGCACATAGGTTGTGCAGTTGATTGTTAATGCAAGCTTAGTGGCGATTGTAGTTGCCTGGGCTTGAGTTAATTTTGAAGTTCGTAATGGCAACTGTGAGGAAATAACTCTCTTTTTTTTCTCTCGATCATAAAAATCTGATGACTTTTGCTGATCATGCAAGAACCAGACCTATGCTATCAGCAATTCAGCATTAATAAACCACTGTGGCACAGTCAGGAACTAACTCTCTAGTCAGTATCATGCAGTATAACCAGCATGCCAGAGAACCTGATCTTACTTTCCAAGTTCGTGCATTTCAAGTGTAACTTCTATTCGTGGCCCTGTGCAAATGATGGTAGTTTTTCATACATATTTTTCAACAGTCGATAAGCAGGAATCGATGGAAGAGACCATTCTTGTTGGTGATGATCTCATGCGTGGGTTGCCATCCCCTGTCATACCAAAGGAAATTGCTTCACATGTCCTTGACGGTGTTGAGATTTGTGATGGCATACTCAAAAATCTTTTCTTATGTGAGTTACTGATTTCTCTGACATAAAAATCATGCTTTCCTTACTCCATATGTAGTAAGTACTATAATAAAGCAATTATATGTTACAGGTCTGCAAATCAATGATATTGAGCCGTTTTGCCAAGATGAAATTGTACTATACCGACAATGTGCTGAGAAAAGGGTCAGTTGTATTATAATTATTTGAAAAATGGCAGGTAAATTTTCCCTTATTGTTTAACATGTTACTTTATCTCCTATTTTTACAGGACAAGGAAATAAGAGAGCGGCTGCAGGATAGTGAATATAAGCTGGGTTTTTCAATGCCCCTGGAAGAAGCTAAGGAAAGAGCTACCCAACTCCAATCAGAAATCACACTGCTTGAAAGGTAGCCAAACATGGCACTTCTACCCTACATGTATTCAATGATCAAAGTGTGATTAGCAGCTCGTTTTATACAGTTTCCTGATTAACATTCAACTGTTGTGAGCCCGTGTGAAGTGTTCAGGTCCTAAATAAGAGATACTGTACTAGACATTCCAAGAGTATGTCCTTGCGCCTGTTTTCTTGTGGTAATACGTAAGGCCATATATTTTGATGAGATCAAACGAAAATGGCCATTTAGACTGCATAAAGAAAGGCGACATAAATAATTTATATATACTATACTGAATTTCAGATTGAGATTCCTAGATGGTTATTGTATAGTGCTTAACCTAATGCTCTGTGTAACACTTATAATTGCCTGCATCTGCTCTGGGGATTTAGTGGCATATGAGAGAACTACGTGGTTCCTGCCTGATAGACTACAGGCAGGATCTTCCTAGGCCTCACAATCCACACGCGGTTGTCTGTTCCGATGAGTAGTACTTGTTCTTGTGCTTGACAGACCTATGAGTCTATGAGTATCACCAGGAATAAGGCCAAACACTTGTAAGAGTACCTTGTAACCATAATTCAGCACCATACAAAATGAATCATTGGATTTTCTGAATTTTCTAATGATTTATCCACACGATTTCATCAGTTTTGCTTGTATGTGCTTTCATATTTCTATTATAGGCGCATGATTCTTGCTAGTGGACTTGAGGGCATGGAAGGATTTCGCCAAAGATGGAGCTTACATGGACAGCTTGGAGACACAAGGTATTAAACTTTGTATTGGTCATGCGTTGTGATCATCTATGTCATAGTTGAAACTCGAAAGAGCTCACTTGTAATTTGTAAATGTGGAATTTGAATATTAAGAAGCTAGTGGGCCTATGGTGATTAACCATGTTTTTAACTATTCGTATGCATTTGAATAATTTATTAATTCAAATCCAGATGGTGGATTAAAATTGCAATATATACATATAAAAAACAAGGCTTGTCATTTTTTTTCCTTCCGTGCAGTTGAGATTAAATTTACATCTGAAGTATCATTAATGCATTATGTTTTTGGTGATGTGGAGGATCTGCTTCAGATGAAATGAAGCTGTTACAACCCTAGTCTCCCATGTGTAGGCATGGGTGTCCTTTTATGTGGTTGTCTGTGCTGAGCCTTCTGAAGGGTTGTTTTTCAAGCACTGTGCCATCCTTCATCCTTTTTATTTCTGGGATGTCTTCCAGTCATGATTTCCCCATTATAAGCATAAAGTACTGAACAAATTATATACAAAGGAATTGCATTCAAAATTTCTGGTCACTCCAGTTGAACTTTTGAATTATTTGAGTTCAGAAATGAACTTAATTCTTCATATTGCATGCCAAGCTGTTTTTTCTCTGTTATTCCATTTTGCATGCCAAGTTGTTTTTTCTCTGTTATTCTATTTTGCATGCCAATTTGTGTTTTTGCTGTTCCATTTTACATTGTTTTTTTTTGCAGGAAAAGGTTGGAAGCGCTGAACAGTGGAATCGTAAAAAGAGGGAGCCAAAGTTCTCCAGTGAAAGAGACAACTCCTGCAGTCAGGAAGAGGTGGTTCCTTTGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016346