BGIOSGA016347

From RiceWiki
Revision as of 04:28, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016347| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016347, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016347

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016347, complete gene.

LocusTag

OSJNBA0073L04.2

Ensembl Transcript ID

BGIOSGA016347-TA

Ensembl Protein ID

BGIOSGA016347-PA

Length

2253

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18074235..18076487

Sequence Coding Region

18074235..18074517,18074654..18075423,18076377..18076487

Genome Context

<gbrowseImage1> name=IndicaChromosome04:18074235..18076487 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:18074235..18076487 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGCCCGTCCGGCCGTCCGCGGCGGCGCTGCTGCTCGCCGCCACCGCTTTCCTCGTCGTCGCGGTGGGCGCCCAGCCGCTGAGCCCGGACAGCCCCATCCTGAGGGACCCCAACGTGATCCCCATCTACATGACCCCCGGCTCGTCGCCCACCGTGGCGAGCTGCTACAACCAGAACAACACGGCGTCGGGCCCCGACTGCACGGTCGAGCCGCGCGCGTGCCCGCGCGGCTGCCGCGACATGTGCTACGTTCACTGCCCCACCTGCAAGCTCGTCTGCCTGTGTGAGCTGACCGGCACGGAGTGCTACGACCCGCGGTTCGTCGGCGGCGACGGCAACAAGTTCCTGTTCCACGGGCGCAAGGACGCCGACTTCTGCCTGCTCTCCGACGCCAACCTGCACATCAACGCGCACTTCATCGGCAAGCGCAACGCGGCGGCGGCACGGGACTTCACCTGGGTGCAGGCCCTCGGCATCCGCTTCGGCGGCCACCGCCTCTACCTCGGCGTCAGGAGGACCGTCAGGTGGGACGCCGCCGTCGACCGCCTCGTGATCACCTTCGACGGCGCGCCCGTCGAGCTGGACGCCGTCCCCGCCGCCAGCTGGAGCCCAGCCTCCGCTCCGGCGCTCTCGGTCTTCCGCACCGGCCCGGCCAACGGCGTGGTGGTGCGCCTCGACGGCCGGTTCCGCATCGTCGCCAACGCGGTGCCCGTCACGGAGGAGGACTCGAGGATCCACGGCTACGGCCTCACCGCCGACGACAGCCTTGCCCACCTCAATGTGGCGTTCAAGTTCTACTCCATCAGCGCCGACGTGCACGGCGTGCTGGGCCAGACCTACCGCCCCGACTACGTCAGCGCCGGCGTGGACGTGGGCGCCAAGATCCCGGTCATGGGTGGCGCCGGGAAGTACGCCGTTTCCGACATCTTCGCCACGGACTGCGAGGTGGCGCGCTTCGCCGGCGAGGACGGCGCGCTCGCCTCGTCCGTTGGCATGGTCGACGCGCCGGCCGACGCGCTCTGCGGCAGCGGGAAGGGCAGCGCCGGCCTGGAAAAGGTTGGAAGCGCTGAACAGTGGAATCGTAAAAAGAGGGAGCCAAAGTTCTCCAGTGAAAGAGACAACTCCTGCAGTCAGGAAGAGGTGGTTCCTTTGGTAGGTTAG</cdnaseq>

Protein Sequence

<aaseq>MVPVRPSAAALLLAATAFLVVAVGAQPLSPDSPILRDPNVIPIYMTPGSSPTVASCYNQNNTASGPDCTVEPRACPRGCRDMCYVHCPTCKLVCLCELTGTECYDPRFVGGDGNKFLFHGRKDADFCLLSDANLHINAHFIGKRNAAAARDFTWVQALGIRFGGHRLYLGVRRTVRWDAAVDRLVITFDGAPVELDAVPAASWSPASAPALSVFRTGPANGVVVRLDGRFRIVANAVPVTEEDSRIHGYGLTADDSLAHLNVAFKFYSISADVHGVLGQTYRPDYVSAGVDVGAKIPVMGGAGKYAVSDIFATDCEVARFAGEDGALASSVGMVDAPADALCGSGKGSAGLEKVGSAEQWNRKKREPKFSSERDNSCSQEEVVPLVG</aaseq>

Gene Sequence

<dnaseqindica>1..283#420..1189#2143..2253#ATGGTGCCCGTCCGGCCGTCCGCGGCGGCGCTGCTGCTCGCCGCCACCGCTTTCCTCGTCGTCGCGGTGGGCGCCCAGCCGCTGAGCCCGGACAGCCCCATCCTGAGGGACCCCAACGTGATCCCCATCTACATGACCCCCGGCTCGTCGCCCACCGTGGCGAGCTGCTACAACCAGAACAACACGGCGTCGGGCCCCGACTGCACGGTCGAGCCGCGCGCGTGCCCGCGCGGCTGCCGCGACATGTGCTACGTTCACTGCCCCACCTGCAAGCTCGTCTGCCGTAAGAAAACGCATCAAAAAGTTCAAAACAGAATGCATATCATGCATGGTAATAGTAGGTAGGCGCGTTACGTTTGGGGTGGTTTTTGATGATCGGTTTTGCATGTCGGGTTTTGGACTGTGACTGGTGCATGCAGTGTGTGAGCTGACCGGCACGGAGTGCTACGACCCGCGGTTCGTCGGCGGCGACGGCAACAAGTTCCTGTTCCACGGGCGCAAGGACGCCGACTTCTGCCTGCTCTCCGACGCCAACCTGCACATCAACGCGCACTTCATCGGCAAGCGCAACGCGGCGGCGGCACGGGACTTCACCTGGGTGCAGGCCCTCGGCATCCGCTTCGGCGGCCACCGCCTCTACCTCGGCGTCAGGAGGACCGTCAGGTGGGACGCCGCCGTCGACCGCCTCGTGATCACCTTCGACGGCGCGCCCGTCGAGCTGGACGCCGTCCCCGCCGCCAGCTGGAGCCCAGCCTCCGCTCCGGCGCTCTCGGTCTTCCGCACCGGCCCGGCCAACGGCGTGGTGGTGCGCCTCGACGGCCGGTTCCGCATCGTCGCCAACGCGGTGCCCGTCACGGAGGAGGACTCGAGGATCCACGGCTACGGCCTCACCGCCGACGACAGCCTTGCCCACCTCAATGTGGCGTTCAAGTTCTACTCCATCAGCGCCGACGTGCACGGCGTGCTGGGCCAGACCTACCGCCCCGACTACGTCAGCGCCGGCGTGGACGTGGGCGCCAAGATCCCGGTCATGGGTGGCGCCGGGAAGTACGCCGTTTCCGACATCTTCGCCACGGACTGCGAGGTGGCGCGCTTCGCCGGCGAGGACGGCGCGCTCGCCTCGTCCGTTGGCATGGTCGACGCGCCGGCCGACGCGCTCTGCGGCAGCGGGAAGGGCAGCGCCGGCCTGGTCTGCAAGAAGTGAGGTGAGAAAGCGAAGTCGTAGAGCTGTTTTTTCTCGGTGTTTAATTACCTATATAAACTAATATAGTAATATATACGTGCTTAGCTGCTGCTACGGTTATTAGTGGTAGTTCAAAGAATAAAAGATTTGGTGATAATTGTCGCGTGTTAGTCGTCGTCGAACGAGCAAACGCTGGGAAGGGAACAAAGTGTTTCTCACTTGTCAGTGCCGTGATTTAGGATGAGATTGCCCGGTTCAAACTTCAAAATCGTGTCGTTGCAATCCTATATCCTCTTTTGTAATCGTGTTTGAGAATAAAAGTTGAACACTGAAGCTTAATTTGTTACGTACTCTATTTGCTTATGTATTTATGTAGTGGCTGCTAAGAAATTCTGAAATTGAAACAATTATGTGTGTCATGACTCATTTGTATTCACTATCTGGAAAAAAAAAAGGAGATGCAACCAACTTGATCAGTTTGCCGGTTGACCCCAGCGCACTTTGTTCAGTACACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCTGTTACAACCCTAGTCTCCCATGTGTAGGCATGGGTGTCCTTTTATGTGGTTGTCTGTGCTGAGCCTTCTGAAGGGTTGTTTTTCAAGCACTGTGCCATCCTTCATCCTTTTTATTTCTGGGATGTCTTCCAGTCATGATTTCCCCATTATAAGCAGTAAAGTACTGAACAAATTATATACAAAGGAATTGCATTCAAAATTTCTGGTCACTCCAGTTGAACTTTTGAATTATTTGAGTTCAGAAATGAACTTAATTCTTCATATTGCATGCCAAGCTGTTTTTTCTCTGTTATTCCATTTTGCATGCCAAGTTGTTTTTTCTCTGTTATTCTATTTTGCATGCCAATTTGTGTTTTTGCTGTTCCATTTTACATTGTTTTTTTTTGCAGGAAAAGGTTGGAAGCGCTGAACAGTGGAATCGTAAAAAGAGGGAGCCAAAGTTCTCCAGTGAAAGAGACAACTCCTGCAGTCAGGAAGAGGTGGTTCCTTTGGTAGGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016347