BGIOSGA016368

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Revision as of 04:28, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016368| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016368, complete gene.| tag = OJ00012...")
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Gene Name

BGIOSGA016368

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016368, complete gene.

LocusTag

OJ000126_13.12

Ensembl Transcript ID

BGIOSGA016368-TA

Ensembl Protein ID

BGIOSGA016368-PA

Length

4170

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18288723..18292892

Sequence Coding Region

18288723..18289421,18289690..18289851,18291198..18291275,18291752..18291830,18291925..18292070
,18292180..18292248,18292378..18292546,18292642..18292892

Genome Context

<gbrowseImage1> name=IndicaChromosome04:18288723..18292892 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:18288723..18292892 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGAGGATCTTCGTGCAGCGCGGGGCTGCCGGCTCCTCGTCCAGCTCCAGCCGCTCGGGGTCACAGACACTGCAGCAGCAGCAGCAACTGCAGGCGACATCAGCGGTTGCCCGGGAGGAGGAGCTGCCGCCGCAGCCTCATCAGCATCCATCGGAGCTCTCGGCTTCAGACAATATAACTGACCATCTAGTGGAGGATGCTGATAACAGCAGTAATAGTAATAAGCCATTGGGGCTAGATGATCCCACATCAGAGAGTTCAAGCTCTGCAGAGGAGAGGGCTGTTATGGAGAAACCTCCCAAAGACGACTCCAATGTGATCGATCCTGCTTTCTTGGTGGAGGAATTAACAGGCCTCCAGTTTTCTGATCAGTTTGAGCAGGAAAATCTAGTGCAGTCAGGTATTGGTCCATCACAGATTGCTGGTGCAGCATCACACCCACCACCTCCACCAGCTCCACCAGCCCCACCACCGAAACCATCGTCTGGTAATAATGGGTTAAGGAGAATGGGGTCTGGAAGCTCAAACAATGCACGGATTGGATCTTCAAGAAGGCCAGTTGCTTGGCCACCAGTGGCAGTTCGGTCATCTGCTTCGGGTTCCCGACCTTCTTCACCTAGATCACTTGCTGATAGTGAAGGGTATAATAGTGCAGATGAGCAGGGCCCCTGTTACGCCTCTAATTATTATGATTCGGAAAGGGAGCGCATGTTTGAACATGACCTAAGACGAGTGAGAGGATTTGAAATCAATAAGATGGCTGAAGATGGGAATTGTCTGTTTAGAGCAGTTGCAGATCAAGTTTATGGTGATCCAGAAGCTTATGACATGGCTAGGCAGATGTGTGTTGATTACATGGAAAGGGAACGTGATCATTTCTCGCAGTTCATGACGGAAGGTTTTACATCATATTGTAGGAGAAAAAGAAGAGATAAGGTATATGGGAACAATATGGAGATCCAGGCATTTGCTGAGATGTACAATCGTCCGATTCACATATATTCCTATAGTACAGAGCCCATTAACATTTTTCAAGGAAGCTACAATACAGATGTCCCTCCAATTAGGCTAAGTTACCATCATGGTAATCATTACAATTCGGTGGTTGATCCTCGTGGGCTGACAGTAGGGGCAGGCCTGGGATTTAGTTCCCTTAGAGGGACAAATAACGTTGACAGGGATCAGGTGAAGGCTGCAATAAAAGCACAGCAAGATCAGCAGATTGAGAATGCACTTCTGGCTGAAGGACGACTATACTCTGATTTGGAGTTGACAGAGAAGGAAATAGAGCGGATGGTGATGGAGGCCTCACGAGCAGAGTATCTAAAGCAGCAGCAACAACAACTTAACTTCAGAGAGTCATCAACATCAGGGGCAGAGCCATCTTCTTCTGCTGCGATTAGTGGGTCTTCTCGGTCAGCTGGGACTGCCGATAGAGTTGGCGAGGAGTGCTTCGTTCTCCCGGACACCGTGCTAACCCGCAGCATGCAGCTCCTCCTGGCAATGGGCTTCAACTACATCCAGGTCATGGAAGCCTATAGCATATTTGGCGAGGACGTCGACTCAATGATCTACTACCTTGTGGAGATGGGAGGCACCGGAGCCTCTGCAGGTGGTAGCAATCGCAGGAAAGGAAAAGCTGCTGAGTGA</cdnaseq>

Protein Sequence

<aaseq>MTRIFVQRGAAGSSSSSSRSGSQTLQQQQQLQATSAVAREEELPPQPHQHPSELSASDNITDHLVEDADNSSNSNKPLGLDDPTSESSSSAEERAVMEKPPKDDSNVIDPAFLVEELTGLQFSDQFEQENLVQSGIGPSQIAGAASHPPPPPAPPAPPPKPSSGNNGLRRMGSGSSNNARIGSSRRPVAWPPVAVRSSASGSRPSSPRSLADSEGYNSADEQGPCYASNYYDSERERMFEHDLRRVRGFEINKMAEDGNCLFRAVADQVYGDPEAYDMARQMCVDYMERERDHFSQFMTEGFTSYCRRKRRDKVYGNNMEIQAFAEMYNRPIHIYSYSTEPINIFQGSYNTDVPPIRLSYHHGNHYNSVVDPRGLTVGAGLGFSSLRGTNNVDRDQVKAAIKAQQDQQIENALLAEGRLYSDLELTEKEIERMVMEASRAEYLKQQQQQLNFRESSTSGAEPSSSAAISGSSRSAGTADRVGEECFVLPDTVLTRSMQLLLAMGFNYIQVMEAYSIFGEDVDSMIYYLVEMGGTGASAGGSNRRKGKAAE</aaseq>

Gene Sequence

<dnaseqindica>1..699#968..1129#2476..2553#3030..3108#3203..3348#3458..3526#3656..3824#3920..4170#ATGACGAGGATCTTCGTGCAGCGCGGGGCTGCCGGCTCCTCGTCCAGCTCCAGCCGCTCGGGGTCACAGACACTGCAGCAGCAGCAGCAACTGCAGGCGACATCAGCGGTTGCCCGGGAGGAGGAGCTGCCGCCGCAGCCTCATCAGCATCCATCGGAGCTCTCGGCTTCAGACAATATAACTGACCATCTAGTGGAGGATGCTGATAACAGCAGTAATAGTAATAAGCCATTGGGGCTAGATGATCCCACATCAGAGAGTTCAAGCTCTGCAGAGGAGAGGGCTGTTATGGAGAAACCTCCCAAAGACGACTCCAATGTGATCGATCCTGCTTTCTTGGTGGAGGAATTAACAGGCCTCCAGTTTTCTGATCAGTTTGAGCAGGAAAATCTAGTGCAGTCAGGTATTGGTCCATCACAGATTGCTGGTGCAGCATCACACCCACCACCTCCACCAGCTCCACCAGCCCCACCACCGAAACCATCGTCTGGTAATAATGGGTTAAGGAGAATGGGGTCTGGAAGCTCAAACAATGCACGGATTGGATCTTCAAGAAGGCCAGTTGCTTGGCCACCAGTGGCAGTTCGGTCATCTGCTTCGGGTTCCCGACCTTCTTCACCTAGATCACTTGCTGATAGTGAAGGGTATAATAGTGCAGATGAGCAGGGCCCCTGTTACGCCTCTAATTATTATGATTCGGTATGATCTCTTGTCTGCTTCTATTTTATATGAAAACTTTAATATCGTATTTCCTATATCAGCTTTGCCATTTGTCAATGATTGCATGGCATGAAGATGATGTCTAGGATGTGGAGATAATGTCATAGATCCTTTGGAAGTTTGGATCCTTTGTAGTTGCATGATACAATAACATTATTCCTTTTATCGTTAATGGTAGGTTTGTCACATTCGCAAACAGGCACCTTTTTGTTTTTGACAACAACTAATGTAGTTTATATTTCCTCAGGAAAGGGAGCGCATGTTTGAACATGACCTAAGACGAGTGAGAGGATTTGAAATCAATAAGATGGCTGAAGATGGGAATTGTCTGTTTAGAGCAGTTGCAGATCAAGTTTATGGTGATCCAGAAGCTTATGACATGGCTAGGCAGATGTGTGTTGATTACATGGTATGTTTATTGTTACATCTATATCCTTTGCCTGTAATCCATAAACTAGATTCACAAGCTTGGAGGCAGTGTTCTAACATGTTAATCTGTTGCATTCAACCTTGCCCCTTATTTGTTCACTATTGGCAGGGCTAGGCAGATGCGTGTTGATTATATGGTATGTTGTGTCGTTGCATCTGAGTAGTAACACCGTATATTATATGTATGCCGTCCCTAGGTTCAATTCATAAGCCAACACTAATATTTGGTTAATATTTCTCATTCTCTACCCTGTCGCATAATTTATCTCACTATTTTATACTAAGTTATTGGCTCTGTAAGATCTTGGATAAGTTTGGGGAAGCAATATGGGTAGATGGTGGAACATTACTAGTTTGAGACAGCCTGCAGTTTCGTCTACTGTTAGTTAGGGTTGAAACATAGTTGCAACTTGCTTCTCCTTTGCTGGTCAGGGTAGATATTGGTTTCTGCTGTTCTGTTTCCTTAGAGGTAGCACTCAGCTAGTTATACAGGAATTAAAATTTAATAATGAACTTACCAAGGGAAAAGTGCTGTCTGTTCTACCTTTTGACTTACATATTTTGTGAAATGACATATTAAACAATTATATCGTGTGCAACAAATGTGAAGCCATGCCTAGTTCATTGTTAATGAAGCATTTGATTCAAGTTCAAGTCCAGACTCAACTGTATCGTTTATCGTTGAACTGATAAACTTCTTGGCAAGGATCTATTTGTTTGCAGCATGATTTTCTTCACCGTCTTTTGCCCAGTCATCTACTTTCACAGTTTCACATGGAAAAAAAGAGAGAAGTTTTGAGGGATGCTCCTGTCTTTATGCCAGCAGGACCTTTTTCTTTCCTAGTGTTCTGTTTTGGTTTCTGTATTTTTTTTAATGCATCTCCTGTCTACTATGCAATCACCAGGACATTGCTTTTCTAGTGTCTTTTTCTGTATATTTCACGCATTTGGGAGTTTTCTTTAAGAAGTTGAAAGCATTTGGAAGAACATACCAATTTGAGTTTGCAGCATGGTATTAGGCATGCATTGAAATCGTAATTACTCCCTGTCGTCTGAGTTACTTGACACATTAGCACCATGTGCATAGAACAAGGAGTATAATTCAAATTTCTGATGTGATTTTGATTGTATACACATCTCATCCACAATAAATCACTGTTCCTGAAAGGGGCATTCTGTATTCTGGAATATATTGCCTCGAAAGCCCGAAGTAATCCCCAGTTTCCTGAAACCTGAATACCTGATCTATTTTAGACTATGAGGGAACAGTGACTTCCCCTTTGACCAAGTGGCTGATATGCTCATTATTGTTATCAATTCTTCCAGGAAAGGGAACGTGATCATTTCTCGCAGTTCATGACGGAAGGTTTTACATCATATTGTAGGAGAAAAAGAAGAGATAAGGTATGCTATTCAATAGATCCTGGCTGTTTAGGATATATTCCAACTGCTTGCTGCTTTTCCTTACACTGAGTGTCTTCGAACCGTTGTGCTGTGCTTGTGAACATCCTCGTATTTTTTTTTTTGAAAATGTTATGAAACTAATGTTTTTCAGTCAGCTGACTTGTCTTTTATTTTAATCTACTATAGAGCATGTGCGCCCCTGGAAAGCATGTTTTTCAGCTGTTTGAATCTTGTTTTGCAGATCTTAATGAACGTCTGCATTTAATTTTTTTAACCATTTATGCTTCCACACAACAGCTGTGCATTTTCCCTGACTTTCAGAATTTCTTTTTTTTATTAAAAATAATGCTATCATGTAGATACTGAGCGCTTGTTTTTCAACTTCAAAATAAAATTAGGACTTAGGACAAGGAAAAATTTAGAACCTTACCTTCTTCCACTGCAAATAATTTATGTTGACATGCTTGATTCTCAAGGTATATGGGAACAATATGGAGATCCAGGCATTTGCTGAGATGTACAATCGTCCGATTCACATATATTCCTATAGTACAGGTAACTGTAACACATATGTTGCTATAGGATTTTAACCCTTCTCTGTAGTTGCATAAACTCTTTCATAGTCTCATATTGTTTGCTCTTACTGCAGAGCCCATTAACATTTTTCAAGGAAGCTACAATACAGATGTCCCTCCAATTAGGCTAAGTTACCATCATGGTAATCATTACAATTCGGTGGTTGATCCTCGTGGGCTGACAGTAGGGGCAGGCCTGGGATTTAGTTCCCTTAGAGGGGTATGTCTTGGTCCATGGTTATCATTGCCCTTATAGCCTATTCTACAGTTGAGTGTTTGCCAACTGGTATTCTTTGTTAATAAATGAACTTCATTTCCTTTCTGTACAGACAAATAACGTTGACAGGGATCAGGTGAAGGCTGCAATAAAAGCACAGCAAGATCAGCAGATTGAGAATGTAAGTACTGGTAATTGTTTTCAAGGGGTACTTGCCATCTCAACATCTGCACAAATTAATCAGGTTTACCTTGAATTGTTAGAGTATAAACCGAAATATACTTAATTCTTTTCTTGCCGGCAACATCAGGCACTTCTGGCTGAAGGACGACTATACTCTGATTTGGAGTTGACAGAGAAGGAAATAGAGCGGATGGTGATGGAGGCCTCACGAGCAGAGTATCTAAAGCAGCAGCAACAACAACTTAACTTCAGAGAGTCATCAACATCAGGGGCAGAGCCATCTTCTTCTGCTGCGAGTAAGCCCACCATTCTTGGCATTGGACTACCTGGTAGACCACATACAGAAACTTTGATAGGTTTGCTGAAACCATCATGATTTCCTATTCTGCAGTTAGTGGGTCTTCTCGGTCAGCTGGGACTGCCGATAGAGTTGGCGAGGAGTGCTTCGTTCTCCCGGACACCGTGCTAACCCGCAGCATGCAGCTCCTCCTGGCAATGGGCTTCAACTACATCCAGGTCATGGAAGCCTATAGCATATTTGGCGAGGACGTCGACTCAATGATCTACTACCTTGTGGAGATGGGAGGCACCGGAGCCTCTGCAGGTGGTAGCAATCGCAGGAAAGGAAAAGCTGCTGAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016368