Os08g0107800

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Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0107800| Description = Similar to PPR protein| Version = NM_001188426.1 GI:297725982 GeneID:9266426| Length = 2680 bp| Definition = Oryza ...")
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Gene Name

Os08g0107800

Description

Similar to PPR protein

Version

NM_001188426.1 GI:297725982 GeneID:9266426

Length

2680 bp

Definition

Oryza sativa Japonica Group Os08g0107800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:380307..382986

Sequence Coding Region

382497..382985

Expression

GEO Profiles:Os08g0107800

Genome Context

<gbrowseImage1> name=NC_008401:380307..382986 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:380307..382986 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ttccagtttctcagcccaccagctcagaactctcctctctctctggacgacgcggcggcggcggccgagcggcgtcgccggagttggagaggctggccatgggagtccgcggcggtggaagcgcgctgggacgggctggggcctccagctccaagcgcacgaagcaaggaggacggggtggggccaagcgcacgaagcaaggagggaggcagagagcgaccgagcccggggacgcacaccaggtgttcgacagattgctcaagcgaggcgaccgtgcctccatcttcgacctcaaccgcgccctctccgacgtcgcgcgtgccagccccgccgtcgccatctccctcttcaaccgcatgcccagagccggcgccaccagtgcggctcccaatatcgccacctacggcatcgtcattggctgctgccgccgcctcggccgcttggacctcgctttcgccaccgtcggccgtgtcatcacgacggggttga</cdnaseq>

Protein Sequence

<aaseq>FQFLSPPAQNSPLSLDDAAAAAERRRRSWRGWPWESAAVEARWD GLGPPAPSARSKEDGVGPSARSKEGGRERPSPGTHTRCSTDCSSEATVPPSSTSTAPS PTSRVPAPPSPSPSSTACPEPAPPVRLPISPPTASSLAAAAASAAWTSLSPPSAVSSR RG</aaseq>

Gene Sequence

<dnaseqindica>2..490#attccagtttctcagcccaccagctcagaactctcctctctctctggacgacgcggcggcggcggccgagcggcgtcgccggagttggagaggctggccatgggagtccgcggcggtggaagcgcgctgggacgggctggggcctccagctccaagcgcacgaagcaaggaggacggggtggggccaagcgcacgaagcaaggagggaggcagagagcgaccgagcccggggacgcacaccaggtgttcgacagattgctcaagcgaggcgaccgtgcctccatcttcgacctcaaccgcgccctctccgacgtcgcgcgtgccagccccgccgtcgccatctccctcttcaaccgcatgcccagagccggcgccaccagtgcggctcccaatatcgccacctacggcatcgtcattggctgctgccgccgcctcggccgcttggacctcgctttcgccaccgtcggccgtgtcatcacgacggggttgaggatgagcccaatcctcttcagtcctcttctcaagggcctctgtgaccgcaggaggacgagcgatgcgatggacattgtgctgcgacgaatgcccgagctaggttgcaagccagatctcttctcctacaccattcttctcaagggtctctgtgatgacaagacaagtcaacaagctctcgacttgctccatatcatggctgatcataaagggcgctgcccactcgatgtggtggcgtataccactgtcatcaatggcttgcttagggagggtcagctggacaaagcttattccctgtttgatgcaatgctggatcgagggccatcaccagatgttgtgacttacagctcgattatcagtgccctatccaagactcaagcaatggacaaggccacacaagtctttactaggatggttaagaacggtgttatgcctgattgcatcatgtatactagtcttgtgcatggatattgctcttcaggaaagcccaaagaggccattgggattttcaaaaagatgtgcagacatggtgttgaacccgatgtcgttacttatactgcgctgatggactatctatgcaagaatgggaaaagcacagaagctagaaagatttttgattctttggtcaagaggggacacaagcctgatagcactacctatggtactctgcttcatggctatgctactgaaggagctcttgttgagatgcatgatcttttggatttgatgatgaagaaaggtatgcaacttggtcatcatatctttaacatgataatgggcgcatatgctaaacataacaaggtagatgaggccttgcttgtatttagcaatatgaggcagcaaggattgaaccctgatatagtcaactatggaacagtattagacatactttgtacagcaggcagagtggatgatgctttgtctcaattcaacagcctcaaatctgaaggacttgctcctaacattgttgtttttaccaccctaattcatggcctgtgtacctgtgacaaatgggacaaggttgaggagctagctttcgaaatgatcgatcgcggcatctgtcttgacacaattttcttcaatgcaataatgggcaacctatgcaaaaaaggaagggttatagaagccaaaaacttgtttgacttgatggtgcgcataggtattgaacctaatactaatacatacaatacactcattgatggatattgcttagatggtaagatggatgaagcaatgaaactacttggagttatggtgttcaatggggtaaaacctagtgacgttacctataataccattattaatggttactctcaaaatggtaggatagaggatggacttactcttttgagagagatggatggcaagggtgtgaatcctggcattgttacatatgagatgctgctgcaagggttattccaggctggaagaactgtagctgcaaaagaactctatctcaggatgattaagtgggatacggtttgaatttagcacttgcaacataatcagtctggtactttgccaaaatagttgcacctcagattccctccaatggttcagaaccgtgtttgatggatttacagattgagaatagaaatgatgacgctgaggatttgtttgctgctctctcgaccaatggtttagtgacaaatgttgtgacctactggttaatgatagaaaatgttgtaaaacaagggttgctagaagaattggatgatttatttcttcatatggagaagagtggctgtactaagttacttcacaaagagcaggtatgcaaggctggggattacctctccattctctaaaattaatcaagagaacttccccctgaagagtcgtaggctgagctgctgattgtgctggtttcatgtgggagacacgttcaacatataaagtttatcctgaaaaatatcgtcctgtgtgaaatcccaggctctttgatgatactgcctggctgcctgctgtggggatcgttttttgtttcttatgtggggattgtaggtatgaagagcactcttgttacactgtatatgaactccggagaagtaaaaataacccaattcctattatagttctctaattttgtttcctttgttagctttctatgaaatgttagtactgctctcttatccttatactatgatccaaacaaaaacatttatcactatcctatattcatctggatttg</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0107800, RefSeq:Os08g0107800