BGIOSGA016405

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Revision as of 04:28, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016405| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016405, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016405

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016405, complete gene.

LocusTag

OSJNBA0028I23.16

Ensembl Transcript ID

BGIOSGA016405-TA

Ensembl Protein ID

BGIOSGA016405-PA

Length

2193

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:18707263..18709455

Sequence Coding Region

18707263..18708140,18708540..18709455

Genome Context

<gbrowseImage1> name=IndicaChromosome04:18707263..18709455 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:18707263..18709455 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACAGGCGCTCTCATGCCGAATTTCACATTTTTCCACAATGACCAAGAGGCTTACTTCATATACACCTGGGATAATGAGACGGCGATCATGCACGCCGGAATAGATGTCTTCGGCAGAGGTTTGGTGGCCACATGGTTGGAGGAATCGCAGGACTGGTTGATCTATTACAGGCAGCCTGAAGTTCATTGTGATGTGTATGCAATCTGTGGACCATTCACAATCTGCGACGACAATAAGGATCCGTTCTGCGACTGTATGAAGGGCTTCTCTGTAAGATCACCAAAGGACTGGGAGCTTGACAATCGAACAGGAGGGTGCATCAGGAATACTCCGTTAAGTTGTGGCAGTAGAACGGACAGAACAGGCCTCACAGATAAATTCTACCCTGTGCAAAGTATTAGGTTGCCTCACAGTGCCGAAAATGTGAAGGTTGCTACCAGTGCAGATGAATGCTCACAGGCATGCTTGAGCAACTGCTCCTGTACTGCTTATTCCTATGGGAAAAGTGGCTGCTCTGTTTGGCATGATGAGTTGTACAATGTAAAGCAACTATCTGATTCTTCTTCTGATGGAAACGGGGAAGTTCTTTACATTCGCCTTGCTGCGAAAGAGTTGCAAAGTTTAGAAAGGAAGAAGAGTGGAAAAATAACTGGCGTTACCATTGGTGCAAGCACCGGTGGCGCTTTGCTTTTGATTATCCTTCTATTGATAGTTTGGAGAAGGAAAGGGAAATGGTTTACTCTCACACTGGAAAAGCCTGAGGTTGGCGTTGGGATCATTGCATTTAGATATATTGATTTGCAACGGGCAACTAAAAACTTTTCTAAGAAGTTGGGGGGAGGCAGTTTTGGTTCTGTATTTAGAGCAATGCTCCGATTATTTTCTACTACAATTAGAGGGCACCGGAGTGGGTATCCTGTATTTAAGGGCTACCTAAGCAACTCTACCATAGCAGTGAAAAGGCTTGATGGTGCCCGTCAAGGAGAGAAGCAGTTCAGGGCTGAAGTGAATTCAATTGGAATCATCCAACGTATTAACTTAGTTAAATTGGTCGGGTTTTGTTGCGAAGGTGATAATAGGTTACTTGTGTATGAATACATGCCAAACAGCTCCCTTGATGTGTGTTTATTCAAGGCTAATGATATAGTTTTGGATCGGACTACTAGATATCAAATAGCTATTGGAGTTGCCAGAGGCCTTGCCTACTTGCATACTAGTTGTCGGGATTGCATCATACATTGTGACATCAAGCCAGAGAATATACTTCTGGATGCATCTTATGTGCCTAAAATTGCAGATTTTGGAATGGCAAAGATTTTGGGGAGAGAATTTAGCCGTGCTATGACTACAATGAGAGGAACTTTTGGATATCTGGCTCCTGAATGGATTAGTGGAACAGTTGTTACATCTAAAGTAGATGTTTACAGCTACGGGATGGTCTTTTTTGAGATCATATCGGGAAGAAGGAACTCAAGTCATGAAAATTTCAGGGATGGTGATTATTCATTCTTTTTTCCCATGCAAGCTGCACGCAAGCTTCTCAATGGAGACGTTGGAAGTCTTGTGGATGCTAGTTTGGAAGGCGGTGTGAACCTCGTTGAGGTTGAAAGAGCTTGCAAAATTGCATGCTGGTGTATTCAAGATAACAAATTTGATCGACCAACTATGGGCGAGGTGGTACAGTCTCTTGAGGGTCTACTTGAACTCGACATGCCTCCATTACCAAGACTACTAAATGCTATCACAGGAGGCTCACATCCAGTGACACCACAATATTTTGATTCACTATAA</cdnaseq>

Protein Sequence

<aaseq>MTGALMPNFTFFHNDQEAYFIYTWDNETAIMHAGIDVFGRGLVATWLEESQDWLIYYRQPEVHCDVYAICGPFTICDDNKDPFCDCMKGFSVRSPKDWELDNRTGGCIRNTPLSCGSRTDRTGLTDKFYPVQSIRLPHSAENVKVATSADECSQACLSNCSCTAYSYGKSGCSVWHDELYNVKQLSDSSSDGNGEVLYIRLAAKELQSLERKKSGKITGVTIGASTGGALLLIILLLIVWRRKGKWFTLTLEKPEVGVGIIAFRYIDLQRATKNFSKKLGGGSFGSVFRAMLRLFSTTIRGHRSGYPVFKGYLSNSTIAVKRLDGARQGEKQFRAEVNSIGIIQRINLVKLVGFCCEGDNRLLVYEYMPNSSLDVCLFKANDIVLDRTTRYQIAIGVARGLAYLHTSCRDCIIHCDIKPENILLDASYVPKIADFGMAKILGREFSRAMTTMRGTFGYLAPEWISGTVVTSKVDVYSYGMVFFEIISGRRNSSHENFRDGDYSFFFPMQAARKLLNGDVGSLVDASLEGGVNLVEVERACKIACWCIQDNKFDRPTMGEVVQSLEGLLELDMPPLPRLLNAITGGSHPVTPQYFDSL</aaseq>

Gene Sequence

<dnaseqindica>1..878#1278..2193#ATGACAGGCGCTCTCATGCCGAATTTCACATTTTTCCACAATGACCAAGAGGCTTACTTCATATACACCTGGGATAATGAGACGGCGATCATGCACGCCGGAATAGATGTCTTCGGCAGAGGTTTGGTGGCCACATGGTTGGAGGAATCGCAGGACTGGTTGATCTATTACAGGCAGCCTGAAGTTCATTGTGATGTGTATGCAATCTGTGGACCATTCACAATCTGCGACGACAATAAGGATCCGTTCTGCGACTGTATGAAGGGCTTCTCTGTAAGATCACCAAAGGACTGGGAGCTTGACAATCGAACAGGAGGGTGCATCAGGAATACTCCGTTAAGTTGTGGCAGTAGAACGGACAGAACAGGCCTCACAGATAAATTCTACCCTGTGCAAAGTATTAGGTTGCCTCACAGTGCCGAAAATGTGAAGGTTGCTACCAGTGCAGATGAATGCTCACAGGCATGCTTGAGCAACTGCTCCTGTACTGCTTATTCCTATGGGAAAAGTGGCTGCTCTGTTTGGCATGATGAGTTGTACAATGTAAAGCAACTATCTGATTCTTCTTCTGATGGAAACGGGGAAGTTCTTTACATTCGCCTTGCTGCGAAAGAGTTGCAAAGTTTAGAAAGGAAGAAGAGTGGAAAAATAACTGGCGTTACCATTGGTGCAAGCACCGGTGGCGCTTTGCTTTTGATTATCCTTCTATTGATAGTTTGGAGAAGGAAAGGGAAATGGTTTACTCTCACACTGGAAAAGCCTGAGGTTGGCGTTGGGATCATTGCATTTAGATATATTGATTTGCAACGGGCAACTAAAAACTTTTCTAAGAAGTTGGGGGGAGGCAGTTTTGGTTCTGTATTTAGAGCAATGCTCCGGTGCTTTCTACCGGTAGTATATACTACCAGTAGAACTAATCTGAACCGTTTATTTTTAAGGGTAGATTAGTAAAGTACTGAGGTAGATTTGGGATAAATTTGGCACTTAATTTATTTTTGTCGTGGATCGCTCGGATGTTTCTGGAAAAGCAGTGCTGCCACCGCTTCCTCATCCATCGCAATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCACGCAGGGCGGCGGCAGCTGAAGCCCGGGAAAGACAAAAGTATCCCTCCGCAAATATTTTTTTTTGGACAAAAATATCCCTCCACAATTCTACTACCATTAAGTGTGATGGTAGTAGAAATAGATCTGAACCCTATGATCAAATGAGATCAACGGTTCAGATTATTTTCTACTACAATTAGAGGGCACCGGAGTGGGTATCCTGTATTTAAGGGCTACCTAAGCAACTCTACCATAGCAGTGAAAAGGCTTGATGGTGCCCGTCAAGGAGAGAAGCAGTTCAGGGCTGAAGTGAATTCAATTGGAATCATCCAACGTATTAACTTAGTTAAATTGGTCGGGTTTTGTTGCGAAGGTGATAATAGGTTACTTGTGTATGAATACATGCCAAACAGCTCCCTTGATGTGTGTTTATTCAAGGCTAATGATATAGTTTTGGATCGGACTACTAGATATCAAATAGCTATTGGAGTTGCCAGAGGCCTTGCCTACTTGCATACTAGTTGTCGGGATTGCATCATACATTGTGACATCAAGCCAGAGAATATACTTCTGGATGCATCTTATGTGCCTAAAATTGCAGATTTTGGAATGGCAAAGATTTTGGGGAGAGAATTTAGCCGTGCTATGACTACAATGAGAGGAACTTTTGGATATCTGGCTCCTGAATGGATTAGTGGAACAGTTGTTACATCTAAAGTAGATGTTTACAGCTACGGGATGGTCTTTTTTGAGATCATATCGGGAAGAAGGAACTCAAGTCATGAAAATTTCAGGGATGGTGATTATTCATTCTTTTTTCCCATGCAAGCTGCACGCAAGCTTCTCAATGGAGACGTTGGAAGTCTTGTGGATGCTAGTTTGGAAGGCGGTGTGAACCTCGTTGAGGTTGAAAGAGCTTGCAAAATTGCATGCTGGTGTATTCAAGATAACAAATTTGATCGACCAACTATGGGCGAGGTGGTACAGTCTCTTGAGGGTCTACTTGAACTCGACATGCCTCCATTACCAAGACTACTAAATGCTATCACAGGAGGCTCACATCCAGTGACACCACAATATTTTGATTCACTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016405