BGIOSGA016425

From RiceWiki
Revision as of 04:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016425| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016425, complete gene.| tag = OsI_159...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016425

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016425, complete gene.

LocusTag

OsI_15919

Ensembl Transcript ID

BGIOSGA016425-TA

Ensembl Protein ID

BGIOSGA016425-PA

Length

3195

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19170252..19173446

Sequence Coding Region

19170252..19170491,19171474..19171701,19172031..19172099,19172221..19172352,19172431..19172565
,19172650..19172712,19172797..19173042,19173168..19173446

Genome Context

<gbrowseImage1> name=IndicaChromosome04:19170252..19173446 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:19170252..19173446 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAAAATCCGAGCATGGCAATCTACTGGTATCTCTCAGTGATGGGCTGCCCCATTATAGTCTTGCAGCAGCAGTTGGCCTGGCAATAGGAGTTGCTGGGTTGTGCAAGGCGCTGCATAGCAGCTTGGTGATACCACCAGTTTCTCAGAAGAAGTTACTTTCGAACTCAGATAGACTTTATTACACTGGAGGCCTGAAAAATCTTGGCAACAATTGCTTTCTTAATGTTATCCTGCAGGATGCTTCGGAAGCCTTTCATCATCTTTTGACCTCACTGAGGGATGAATTTTCCCGTTGTTATGTACCAAATAGGAGTTCTCTGGCAGACATCACCATGTTTCCTTCCAAAGTATATAGTCAAAGGGAAGGTAACCAGCCTGAATGCAAGCGATGGAAACAAAACCTATTTGGTCCCTTTGATGGGACTATTGGCAGCATATTATCTTGCAGAAATTGTTCATCTGTGCTGTCATTGGACTTCGAAAATTTCTACTGCTTGCCTCTCTCACCTGTGGCTACTATAAATGGAGATATTATCAATGGATGTAGTTTGGTGGATTGCCTTGAGCACTTTACGGCGTTGGAGCATCTTGACAACTATCGTTGTGATCATTGTTGGCACAATGTTGCTGCCAAATATTTGTCTCTTAAATCCGAAGTTGATGAGGAAAAAATTAACAAACTACACACCTGTGTCGACTATGGCACTTGCAGTTGCAGGCATATATTTACCCCGGAGGAAATGACATGTTCGATATCTTCTCAGGCAACAAAGCAGCTGGCTATCACTCATTTCCCAAAGATCTTGTGCATTCATTTGCTACGCGCTTCTGTTGGTCTAGATGGTGAATTTGTTAAGCGTGGGGGACACATTTCTTTCCCTTTACTTCTTGATCTTTCACCATTTGCTGGTGGTGCATTAATCCCTGGACAGGGACCTAAACCTTCAGCAATGAACAAGCAAAGACATGGCCAGCAAACTCTCCATCTGTGGCGACAGCTGAATGCAGAGATGCCTGTGAATATGTTCCCCGCTGCCACTGATGGGGACTCATCAAGTCATCATTGTGGTGATGAATCAATAAACACACTTGGACGCTCATTTTACGTGGGAAATAGGGATGCAGATAGTAGGTTCTTGTCTTCATCATCATTGACAGACAAGTTATATGGCCTCTCATCTGTCGTGGAACACTACGGCGTATGTGGAGGTGGGCATTATGCAGCTTACCGGAGAGTAACGCCAAATTCGGATTCTAATGAACCAGTGCAATCTCTTGCAAGTTTTAGAAAGGAGTGGCTTTACGTCTCGGATGATCATGTGTCCCATGTTTCAGAGTGTGAAGTTTTGGCAGCGGAGGCCACCCTGCTTTTCTACGAAAGGCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MGKSEHGNLLVSLSDGLPHYSLAAAVGLAIGVAGLCKALHSSLVIPPVSQKKLLSNSDRLYYTGGLKNLGNNCFLNVILQDASEAFHHLLTSLRDEFSRCYVPNRSSLADITMFPSKVYSQREGNQPECKRWKQNLFGPFDGTIGSILSCRNCSSVLSLDFENFYCLPLSPVATINGDIINGCSLVDCLEHFTALEHLDNYRCDHCWHNVAAKYLSLKSEVDEEKINKLHTCVDYGTCSCRHIFTPEEMTCSISSQATKQLAITHFPKILCIHLLRASVGLDGEFVKRGGHISFPLLLDLSPFAGGALIPGQGPKPSAMNKQRHGQQTLHLWRQLNAEMPVNMFPAATDGDSSSHHCGDESINTLGRSFYVGNRDADSRFLSSSSLTDKLYGLSSVVEHYGVCGGGHYAAYRRVTPNSDSNEPVQSLASFRKEWLYVSDDHVSHVSECEVLAAEATLLFYERL</aaseq>

Gene Sequence

<dnaseqindica>1..240#1223..1450#1780..1848#1970..2101#2180..2314#2399..2461#2546..2791#2917..3195#ATGGGAAAATCCGAGCATGGCAATCTACTGGTATCTCTCAGTGATGGGCTGCCCCATTATAGTCTTGCAGCAGCAGTTGGCCTGGCAATAGGAGTTGCTGGGTTGTGCAAGGCGCTGCATAGCAGCTTGGTGATACCACCAGTTTCTCAGAAGAAGTTACTTTCGAACTCAGATAGACTTTATTACACTGGAGGCCTGAAAAATCTTGGCAACAATTGCTTTCTTAATGTTATCCTGCAGGTATATGTCGTTCTCTATTGAATGATCCGTCATATGGTACTCTTTATGTATAGCACTGTCATCAGCTGGAGCTAAAATGCTAAACTAGAGAAAATGTTTGTTTGACAGGCACTTGCTAGCTGTGACGGGTTTGTTTCCTCTCTAGATAATTTGCTTGGAAGTGAGGATGTGCTACCTGAGGAAAAGTCCGAAAAAATGCCTCTTATTTTTGCTCTAAGTTCTCTTATAAAAGGTACACCGTTTACTCTTTCTAAAATGCACCTTTGGAAGGGAGTTGGTGTGGAATCAGTACTTAGCAACTTTTAAGTTCTTTTTTATTGATTTGTCTGTAATTATCTGTGCAATACATAATTTGAGTGGAAAATAAAGTGTTGGTTCCTGTGACCCTAGTGGTCTCAGGAATTACCGAGCAGTGGTGGTCTGGTGGAATCGTTACATACTGTAATACTGTAAACACGGTTCGTTTTTACAGGTATACTCTGATGCAGTGTTGACATTTATGAATCTATTTACATAAATTGCTGAACATCATATCATGTCATTGCATTGGTTGGTAAAATGAATTGCTTGCAGCTCACAGTTTGATGTTCTTGCTCCACTTCACACATCACGGTTTCTTCCTTCAATATGAAAGAAAAAGCATGTCTTTTTAACTGTTGTTTTATTTTTCTTAAAAAGAATATAACTTGTGATGCTCCCAGTTTCAAGTTCTATACTTGTAAAACTTCATTTAGTTGGTTACTCATAAAATTTCTTTTACTAGTTTATGAACTTTACTTAAATGTTGTAGACTTGAGCGTAGTTCGAGACAAAAGGACTGAACTGAGTCCACACAGAGTAATGGATGCTTTGAGCTTCTACGTCGGCCACTTTAATTTGACAAGAGAGCAGGCATGATGTTTAATCCTGTATATTTCTTCTCTTTAAATTTTACTTTTATATTATATGTCCTTAAATGATGAGAACTATTTAACCCTCATAGGATGCTTCGGAAGCCTTTCATCATCTTTTGACCTCACTGAGGGATGAATTTTCCCGTTGTTATGTACCAAATAGGAGTTCTCTGGCAGACATCACCATGTTTCCTTCCAAAGTATATAGTCAAAGGGAAGGTAACCAGCCTGAATGCAAGCGATGGAAACAAAACCTATTTGGTCCCTTTGATGGGACTATTGGCAGCATATTATCTTGCAGAAATTGTTCATCTGTGGTAGATACCTATGCCCCTATTTTTGTAGCTGTTAACTATGCTCCTAATCTCGTATGTTGTGACGATTAATGTGTCCTCTTCTCTATCTTTTACCAAATGCATGTTGCTGTACACACCTTTGACAATTATTTTATCTAGCTATATATGTATGCCATTATAAGTATGGTATTATGGAAGATGTATTGATGATAAATCTGTATATATTTGACCAATTTAAATATATTTTGGTGGGGGTGTGTCACATGCTCTCTGCAGTTTGTTGAAAGCATGCTTAGTACTTTTTATCACTTCTGTTGATTTTCTGTTCTCATTGTTATTGTTTTGCACAGCTGTCATTGGACTTCGAAAATTTCTACTGCTTGCCTCTCTCACCTGTGGCTACTATAAATGGAGATATTGTATGTGCAAGTGAACCTTCCTATGTTTCATTAATTCAGGATTCATCAATGGCTAGATTTGGTTCCTGCGCTATTCATAATGCTTGTTTCCCTTATGTTTCTCTTATCGTGTGACATTTAGATCAATGGATGTAGTTTGGTGGATTGCCTTGAGCACTTTACGGCGTTGGAGCATCTTGACAACTATCGTTGTGATCATTGTTGGCACAATGTTGCTGCCAAATATTTGTCTCTTAAATCCGAAGTTGATGAGGTAGTAGTTTTATCTTTTGATGTATCTTAGTTGTTTAACTAAGCTTGATATGATACCCTGTATTGTTATCTTTGGCAGGAAAAAATTAACAAACTACACACCTGTGTCGACTATGGCACTTGCAGTTGCAGGCATATATTTACCCCGGAGGAAATGACATGTTCGATATCTTCTCAGGCAACAAAGCAGCTGGCTATCACTCATTTCCCAAAGGTACAACCAAAGTACCTTTTTGTAACATAAGTGGAATTATGTCGTACAATATGTTGCTAAACCTGATTTAGTATCCTCTTCCAGATCTTGTGCATTCATTTGCTACGCGCTTCTGTTGGTCTAGATGGTGAATTTGTTAAGCGTGGGGTAAGCGCACGTAACATGTGTAATAAATACTGTTGCTTTATATCACTCCACACTCTAAACTATATAGGTCGTCTTTGATTGCAGGGACACATTTCTTTCCCTTTACTTCTTGATCTTTCACCATTTGCTGGTGGTGCATTAATCCCTGGACAGGGACCTAAACCTTCAGCAATGAACAAGCAAAGACATGGCCAGCAAACTCTCCATCTGTGGCGACAGCTGAATGCAGAGATGCCTGTGAATATGTTCCCCGCTGCCACTGATGGGGACTCATCAAGTCATCATTGTGGTGATGAATCAATAAACACACTTGGACGCTCATTTTACGTGGTATAAACTACTTACAACCATATATATTTCTTAGGTTTTGTTTGAATGATGATGGCATTCCTGATCATTTTTTCTATACAATTAAAATCACGCAATCATTTCATATGCCTCCTTGTCTTTTTTAGGGAAATAGGGATGCAGATAGTAGGTTCTTGTCTTCATCATCATTGACAGACAAGTTATATGGCCTCTCATCTGTCGTGGAACACTACGGCGTATGTGGAGGTGGGCATTATGCAGCTTACCGGAGAGTAACGCCAAATTCGGATTCTAATGAACCAGTGCAATCTCTTGCAAGTTTTAGAAAGGAGTGGCTTTACGTCTCGGATGATCATGTGTCCCATGTTTCAGAGTGTGAAGTTTTGGCAGCGGAGGCCACCCTGCTTTTCTACGAAAGGCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016425

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016425&oldid=65319"