Os08g0108500

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Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0108500| Description = Similar to Transcription factor LAX PANICLE| Version = NM_001188427.1 GI:297725984 GeneID:9271209| Length = 1771 bp|...")
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Gene Name

Os08g0108500

Description

Similar to Transcription factor LAX PANICLE

Version

NM_001188427.1 GI:297725984 GeneID:9271209

Length

1771 bp

Definition

Oryza sativa Japonica Group Os08g0108500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:417808..419578

Sequence Coding Region

418435..419355

Expression

GEO Profiles:Os08g0108500

Genome Context

<gbrowseImage1> name=NC_008401:417808..419578 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:417808..419578 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaacatgacccacaactccagcagcagcagctcatgggatttggacatgagcctcggcagccaccaccatcccctcctcttcgaccagccgccgccgccgccgcccccgccgccgccgccgccattacccttccacctccaccaccaccctctagatccctctccttcttcttctttgtttcctcctcctccccatcatcaccaccatgcccatcacctccatcatcctctcgacctggaccagcggcgtggtcaccatgactatggcggcggtgaccaggggggcgacgaggagctgaggcttcagcaggaggcggcggcaggtggtggtggtggtggccaggacggcggcggcggtggggatcaggacgccgacgaggagctcggcgccatgaaggagatgatgtaccggatcgccgcgatgcagccggtggacatcgacccggcgaccatcaagaagccccgccgccgcaacgtccgcatcagcgacgacccgcagagcgtcgccgcccgccaccgccgggagcggatcagcgagcgcatccgcatcctgcagcgcctcgtcccgggggggaccaagatggacaccgcctccatgctcgacgaggccatccgctacatcaagttcctcaagcgccaggtccaggagctccagcaccagccgggaccgccgccgccgccgtatcccgccggagctgcaccggccgccgggcccagcacctcggccgtgggcccaccgggccggccattcttgccgctgggtggaggagggcccatgatcgactgggtcggcctgaccaggccggtggacatccatgggccgacctcgtcgtcgtcctcgtcgtcgatgggcggcgccttgggtttcgggttcggctgcggcggcggcgggcagagcagccatgggatgcactga</cdnaseq>

Protein Sequence

<aaseq>MDNMTHNSSSSSSWDLDMSLGSHHHPLLFDQPPPPPPPPPPPPL PFHLHHHPLDPSPSSSLFPPPPHHHHHAHHLHHPLDLDQRRGHHDYGGGDQGGDEELR LQQEAAAGGGGGGQDGGGGGDQDADEELGAMKEMMYRIAAMQPVDIDPATIKKPRRRN VRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYIKFLKRQVQE LQHQPGPPPPPYPAGAAPAAGPSTSAVGPPGRPFLPLGGGGPMIDWVGLTRPVDIHGP TSSSSSSSMGGALGFGFGCGGGGQSSHGMH</aaseq>

Gene Sequence

<dnaseqindica>224..1144#gggctctccttcctccatctccatctccctgctgtgactgagctacatactaccagagctaaagcatatgtactcaaatctgtactacctccttaccttgtgatccatgctaagctgcatgctagctaggttgctgccatcacttactgcatgcacttgtgagtggtgatctcatctgctgctactacagcaattagctagcagagctgcagctcatcgatccatggacaacatgacccacaactccagcagcagcagctcatgggatttggacatgagcctcggcagccaccaccatcccctcctcttcgaccagccgccgccgccgccgcccccgccgccgccgccgccattacccttccacctccaccaccaccctctagatccctctccttcttcttctttgtttcctcctcctccccatcatcaccaccatgcccatcacctccatcatcctctcgacctggaccagcggcgtggtcaccatgactatggcggcggtgaccaggggggcgacgaggagctgaggcttcagcaggaggcggcggcaggtggtggtggtggtggccaggacggcggcggcggtggggatcaggacgccgacgaggagctcggcgccatgaaggagatgatgtaccggatcgccgcgatgcagccggtggacatcgacccggcgaccatcaagaagccccgccgccgcaacgtccgcatcagcgacgacccgcagagcgtcgccgcccgccaccgccgggagcggatcagcgagcgcatccgcatcctgcagcgcctcgtcccgggggggaccaagatggacaccgcctccatgctcgacgaggccatccgctacatcaagttcctcaagcgccaggtccaggagctccagcaccagccgggaccgccgccgccgccgtatcccgccggagctgcaccggccgccgggcccagcacctcggccgtgggcccaccgggccggccattcttgccgctgggtggaggagggcccatgatcgactgggtcggcctgaccaggccggtggacatccatgggccgacctcgtcgtcgtcctcgtcgtcgatgggcggcgccttgggtttcgggttcggctgcggcggcggcgggcagagcagccatgggatgcactgatggatgatgaaattgggatggagcaatatagctgagagagaggagattaactaagctagggatgcatggattggtggactagagaggtaattttggtaatttggttttggtcttggtttttattaattaatttgctcttgttgttggctcaggctactagctactctctctactccccactgagtagctaagctgctgccttgatgtttctcaaagtacaattaattaataagattagctagggtttgcattctatttgccaattttttttccctgcatgtgataattacccttcaggggtttggttaattttctcttgtcgaattttcttttgtgggaaatttcaattaagggaccaaatcattcaacaaattaaaatctggacacaacacatatgtagtgtagtagaaatttaatttaacaaattaaatcttggatgcatgcaatagaataattgtcaatgatgttctggtaggttgcgtgttgtgtcgtggtggcagcatagcatagcatgcatgcatatatgttgactgctaggctagctactggttgagctgagagcatgggatcacaagagaggatcagaccggatacatttatttatttattgtttgcagcttgtcacac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0108500, RefSeq:Os08g0108500