BGIOSGA016437

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Revision as of 04:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016437| Description = BGIOSGA016437| Definition = Oryza sativa Indica Group BGIOSGA016437, complete gene.| tag = | tid = BGIOSGA016437-TA|...")
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Gene Name

BGIOSGA016437

Description

BGIOSGA016437

Definition

Oryza sativa Indica Group BGIOSGA016437, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA016437-TA

Ensembl Protein ID

BGIOSGA016437-PA

Length

3204

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19292869..19296072

Sequence Coding Region

19292869..19293291,19293401..19293583,19294465..19294593,19294871..19295001,19295101..19295272
,19295788..19296072

Genome Context

<gbrowseImage1> name=IndicaChromosome04:19292869..19296072 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:19292869..19296072 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCGGCGGAGGCACGTGGCGGCGGGGGCGGGGGCGCCGGCGCCGGCTGCGGGGGAGTGGGCGGCGGTGACAGCCGGTGGCGGGGCTGCGTGGGCGTTGTCGCCGGTGGAGGAGGTCGGGACGAAGCAGGAGCTGATGCGGCGGACGGGGCTGCCGCCGCGGGACCTCCGCGCGCTCGACCCGGCGCTGTCGTCGGCGGCGTCGGCGTCGTCGTGCCGCCCGTCCGCCATCACGGGGCGGGACCGCGCCGTCGTCGTCAACCTGGACCGCGCCCGTGCCGTCATCACCGCGTCCGAGGTGCTCGTCCCGTCCCCGCGCGACCCCGCCGTCGCGCCGCTCGTCCGGGAGCTCCGCGCCCGCCTCGCCCTCGCCGCCTCCCCAACCCCCGCGCCGTCGCCGTCGCCGTCGCCGCCGCAGCATGGCATGGCGGTGGGGATGGACGGGAGCATCTCGCCATCGCCGGCGAGCCGCGGCGGCGAGGAGGCCGCTGGCAACGGCAAGGATGGAGAAGCTCTGGGAGGAGGTGACAAGGCTCTGCCGTTCGAGTTCAGGGCGCTCGAGGTGTGCCTCGAGTTCGCCTGCAAGTCTCTCGAACATGAGACTTGCACATTGGAGAAAGAGGCATACCCAGCTTTAGATGAACTCTCCTCCAAAGTCAGCACCCTCAATCTTGAGCGTGTGAGGCAAATCAAGAGCCGACTCGTCGCAATATCTGGCAAAGTTCAAAAGGTCAGGGATGAACTGGAACACTTGCTGGATGACGACATGGACATGGCCGCATTGCACCTAACGGAGAAGCTCGCTTACCAGTCATCAAGATTCGACATCGATAAAGAAGCAAGCGAGCTCGAAGATCACAGCTCTGAATGCAGCAGCAGGGATGAAGAAGGAGTCGAGGGAGGCGGCGGCGGCGACGGCGACGACGAGACGATCGCCGGCGGCGGCAGCTTCAGCCCCAACACCGACGAGCTGGAGATCCTGCTGGAGTCCTACTTCGTGCAGATCGATGGCACCCTCAACAGCCTCTCCACCCTGAGGGAGTACGTGGAGGACACGGAGGACTACATCAACATGATGCTGGACGAGAAGCAGAACCAGCTGCTGCAGATGGGGATCCTGCTGTCGACGGGGACGCTGGTGTCCAGCTGCGCCATCGCCGTCACGGGGGTCTTCGGCATCAACGTCCACATCTCCCTCTACGACTCCCCCGCCTCCTCCGCCGCCTTCCCGTGCGCCGCCGCCGGCATCGTCGCCGGCAGCCTCGCGCTCTACCTCGCCGCCCTCCTCTGCTACAAGCGCGCCGGCATCCTCCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MAARRRHVAAGAGAPAPAAGEWAAVTAGGGAAWALSPVEEVGTKQELMRRTGLPPRDLRALDPALSSAASASSCRPSAITGRDRAVVVNLDRARAVITASEVLVPSPRDPAVAPLVRELRARLALAASPTPAPSPSPSPPQHGMAVGMDGSISPSPASRGGEEAAGNGKDGEALGGGDKALPFEFRALEVCLEFACKSLEHETCTLEKEAYPALDELSSKVSTLNLERVRQIKSRLVAISGKVQKVRDELEHLLDDDMDMAALHLTEKLAYQSSRFDIDKEASELEDHSSECSSRDEEGVEGGGGGDGDDETIAGGGSFSPNTDELEILLESYFVQIDGTLNSLSTLREYVEDTEDYINMMLDEKQNQLLQMGILLSTGTLVSSCAIAVTGVFGINVHISLYDSPASSAAFPCAAAGIVAGSLALYLAALLCYKRAGILQ</aaseq>

Gene Sequence

<dnaseqindica>1..423#533..715#1597..1725#2003..2133#2233..2404#2920..3204#ATGGCGGCGCGGCGGAGGCACGTGGCGGCGGGGGCGGGGGCGCCGGCGCCGGCTGCGGGGGAGTGGGCGGCGGTGACAGCCGGTGGCGGGGCTGCGTGGGCGTTGTCGCCGGTGGAGGAGGTCGGGACGAAGCAGGAGCTGATGCGGCGGACGGGGCTGCCGCCGCGGGACCTCCGCGCGCTCGACCCGGCGCTGTCGTCGGCGGCGTCGGCGTCGTCGTGCCGCCCGTCCGCCATCACGGGGCGGGACCGCGCCGTCGTCGTCAACCTGGACCGCGCCCGTGCCGTCATCACCGCGTCCGAGGTGCTCGTCCCGTCCCCGCGCGACCCCGCCGTCGCGCCGCTCGTCCGGGAGCTCCGCGCCCGCCTCGCCCTCGCCGCCTCCCCAACCCCCGCGCCGTCGCCGTCGCCGTCGCCGCCGCAGGTGACACATGCATGCCCCCCACCCTACCTTCCTTCTTGCATTGCATCGTACGTCTTCTTCTTAAGCAAAAGCTCTGATCTCTCACTCCTTTTCTTTTCTTTTTTGAAAGCATGGCATGGCGGTGGGGATGGACGGGAGCATCTCGCCATCGCCGGCGAGCCGCGGCGGCGAGGAGGCCGCTGGCAACGGCAAGGATGGAGAAGCTCTGGGAGGAGGTGACAAGGCTCTGCCGTTCGAGTTCAGGGCGCTCGAGGTGTGCCTCGAGTTCGCCTGCAAGTCTCTCGAACATGAGGTGTGTGTTCTTCTACCTTGTCTCCATGCTTTTTACCTGCAGTGCTATCTCCATCTCCAATTCTCCATTCAGAATTGGATGGAAATGCAACCAATACCTGATCTTTAAGTGCAGTGTAGCTATGCATAACATGCATTAAAAAAAAAGAGATTTGAAGAGAGATACATCCCTCCAAACATTTTTCAAGAAGAAATTATAAGCGTATTGAGAATTAAACACGGAACCTTGGAGTTATAACCACTTACCCATTGCTACTGCACTATCAAGTGCATCTCAACATGCAATTTACTTGGGTTGAATTTACCATGAATAGTGAGTGGCTCACCAAACTATGCAAAAAGTTATGCATTGTTGTATATTTGTATTAGGTTTGACATTGTAATTGTAGACATATGTTCAATTCCTATCCACATTGATTTTTCTAGGTATGTCGTATGATCTTTTAACACTCAACTAGACGTCCACTATCAGTATCTTGCACATGTATATGTCTTTCCTTGCTTTGGTTTATATCACCTTCAGAAGGGGAAAAAAAGAAGTGGATTTGTACCTTGCTACATTTCGACAATTCTTTAGCGGCATCCCTTCTAATCCAACCTTTTTTATTATATGAAAATGACTTTTGTTCTTCTGCCCTGCAAACATGCTTCTCCGATTTTCATGGTTGTTGAGATGATGCTAAGTATCCATGCCGTGCCGGTAACATTCAGTCATGTGTCTCAACCTTTTTTACTTCCTGATAGCACTATAACAATGTGAAGACAAAATTCATTTCTCGAGCACATTAAAACGGTAGTGTGTTTAGCAACTTAGCATTCAGGCAATTCTGCACTGAAATTGCAGTTCCTAAGAAAAATTTGCTTGATACATGATTGCATCAGACTTGCACATTGGAGAAAGAGGCATACCCAGCTTTAGATGAACTCTCCTCCAAAGTCAGCACCCTCAATCTTGAGCGTGTGAGGCAAATCAAGAGCCGACTCGTCGCAATATCTGGCAAAGTTCAAAAGGTCAGCTTCAGTATATATACCACAAGCATATGTGAAACTGAAATTACTTCCTCCGTTTCACAATGTAAGACTTTCTAGCATTACTAACATTCATTAAGATGTTAATGAATATAGACATATTAGATTCATTAATATCTGTATGTATATGGGTAATGCTAGAAAGTCTTACATTGTGAAACGGAAGGAGTAACATTTATGTATACCATGGATCAGATAGTCCATTAGGAGTAATTCTGAAGTGTTTAAGTAACATTGCCATGTGTATCTCGTCTGACAGGTCAGGGATGAACTGGAACACTTGCTGGATGACGACATGGACATGGCCGCATTGCACCTAACGGAGAAGCTCGCTTACCAGTCATCAAGATTCGACATCGATAAAGAAGCAAGCGAGCTCGAAGATCACAGGTAAGAAATTTTTTTCTTCCATAGGTTGATGACACAAGTCGATATGCTTCATCCAACCATTGTCAACATGCTACAGATGTGTCGTCTGAATGTCTGAAGCTCTGAATGCAGCAGCAGGGATGAAGAAGGAGTCGAGGGAGGCGGCGGCGGCGACGGCGACGACGAGACGATCGCCGGCGGCGGCAGCTTCAGCCCCAACACCGACGAGCTGGAGATCCTGCTGGAGTCCTACTTCGTGCAGATCGATGGCACCCTCAACAGCCTCTCCACCGTGAGTAGTTCCACTCGCCGATGAACGTTCAATCATATCTAGACGTCCACCTATTTATTATATGTCAACTAAATAATTATAATTTTTTTAAAAAAAAATTAATAAGATAAATCAATATATAATATATCATTCCACAAATATATAAGCTATCAATTGTAACAAAAGTGACAAATAAAACTCAAATTAGCAGTTAAATTTGTTATTTTTGTTACAACTTATAGAAGTAGAATTTACTTCTATAATTTAAACTTATATGTTTGTGAAGTGATATATTATTTATTAAACTATATGTTAATTTTTTTATAAATATTTAGTGGACATGTAATAAATGGGTGGACGTCCCCTCGAGTGATTAGAATCCATCTCGATTTTTTTATAACCACTAAATGACCTGCATTAAACGGGTAGACATCCGCTCGAGTCATTAAAACAGATTCCCCTCTCTCGCCATTGCTAACGAAGGTGAAATTAACCATCTGAATTTATCTCTCTCTCTCTCACGGATGAAACTGAAGCTGAGGGAGTACGTGGAGGACACGGAGGACTACATCAACATGATGCTGGACGAGAAGCAGAACCAGCTGCTGCAGATGGGGATCCTGCTGTCGACGGGGACGCTGGTGTCCAGCTGCGCCATCGCCGTCACGGGGGTCTTCGGCATCAACGTCCACATCTCCCTCTACGACTCCCCCGCCTCCTCCGCCGCCTTCCCGTGCGCCGCCGCCGGCATCGTCGCCGGCAGCCTCGCGCTCTACCTCGCCGCCCTCCTCTGCTACAAGCGCGCCGGCATCCTCCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016437