BGIOSGA016445

From RiceWiki
Revision as of 04:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016445| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016445, complete gene.| tag = OsI_159...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016445

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016445, complete gene.

LocusTag

OsI_15958

Ensembl Transcript ID

BGIOSGA016445-TA

Ensembl Protein ID

BGIOSGA016445-PA

Length

5009

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19470169..19475177

Sequence Coding Region

19470169..19470269,19470441..19470506,19471024..19471174,19471712..19471764,19472704..19472823
,19472896..19472959,19473117..19473202,19473307..19473389,19474681..19474774
,19475132..19475177

Genome Context

<gbrowseImage1> name=IndicaChromosome04:19470169..19475177 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:19470169..19475177 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTCGCTTGCGTCGCAAGCGAAGCCGGCGGCCGTGCTCTGGCTCGCCGGCTTCCTCCAGGCCGCGCGCCTCCACCGCGTCGTCTCCTTCTGCGCCAGCTCGAGGCCTCTGTCGGCCAGGATCGCGCAGTGCTTCCTGCTCAACGGGTTCATCTTCCTGGGGAGCTTGTTAACCCTAAAATCGGTGGTCATTCCAATCCTTTCGTGGATACTGCCTGGGGATTGCAGTCAGTTGCAAGAGCAGCATCTGTGTGATCACACAGTAGCTGTAGCGACCTACTCATTTCTACGCTCTGTTCTTATTCAAATATTCTATGTATTATGGTTTTATCCACTTTACATCTTCAGCTTCGTGTTGAGTACACTTTGGTATAATGACATTGCTAAGCATGCTTTGGATGTTGTGAAAAGAAAGAGCCTAGATGCAACTAAAGCATTGGATGCTCACACCATATCTGAATCAACAGAGAAACCTGAAGGATTTGATGAGGTTGCAATTGGTATTGGAGAACAGGTCTATTCAATTCTTCTTTTAACTATTTTCTTTATTGAGGTTTCAGTGATTGGTTACATACCTTACTTTGGGAAGCCTATGAATTTCCTGCTATTATCTTTGATGTATGCCTACTACTGCTTCGAGTACAAGTGGAACTTCTTTGCAGTGAGCCTGAATGAGCGGCTTGATTTCTTTGAGTCAAATTGGGCCTTTTTTGCTGGATTCGGTACCCAAGCAGAAAAAGTAATTGATCAACTGAAACCTTCGCATGGAGGGAAACTGCAGAGAATACCTGTGTTCTTCATAGCTAAGCGACTAACGACTCAAGTGCTGCAATTGTTTCCAGAGGTACAAAAAGAACAATGA</cdnaseq>

Protein Sequence

<aaseq>MESLASQAKPAAVLWLAGFLQAARLHRVVSFCASSRPLSARIAQCFLLNGFIFLGSLLTLKSVVIPILSWILPGDCSQLQEQHLCDHTVAVATYSFLRSVLIQIFYVLWFYPLYIFSFVLSTLWYNDIAKHALDVVKRKSLDATKALDAHTISESTEKPEGFDEVAIGIGEQVYSILLLTIFFIEVSVIGYIPYFGKPMNFLLLSLMYAYYCFEYKWNFFAVSLNERLDFFESNWAFFAGFGTQAEKVIDQLKPSHGGKLQRIPVFFIAKRLTTQVLQLFPEVQKEQ</aaseq>

Gene Sequence

<dnaseqindica>1..101#273..338#856..1006#1544..1596#2536..2655#2728..2791#2949..3034#3139..3221#4513..4606#4964..5009#ATGGAGTCGCTTGCGTCGCAAGCGAAGCCGGCGGCCGTGCTCTGGCTCGCCGGCTTCCTCCAGGCCGCGCGCCTCCACCGCGTCGTCTCCTTCTGCGCCAGGTTTCGCCCGCTCCCTTCTCTTCTCGCCCCACCCCCACCACAGCTTCCCCATCTCGAATTCTCGATTCTTGGCGCGTCGAGATTGGGGCGATTTTGTGGTGGTGGGGAGGTTTTCCTCCTCCTCTCAATTCGCTGCTCGGTTGCTAACGCTTTTGTCGTGTGTGGATGCAGCTCGAGGCCTCTGTCGGCCAGGATCGCGCAGTGCTTCCTGCTCAACGGGTTCATCTTCCTGGGGAGGTACAGTTTGCTCGTAATTGAGGTTAAAATCTCAGCTTAATTTGTGTGTGTTTTTTTTTTCGAAATTTATTATGATAGGGGGCGGCCAAAGTTCAATTTGCTTGAGTGACAGAGTAGTTGGGGTGTAATTTTGCCTTGTGAAGCAAATTAGCCTGGGGTTAGCGTGCAATCGGCCCATTGCAGTAAAGACTAAAGAGGCTAGAAAATTAGCGAATCGTAGTACATGTCTGAGAATGTTTAGCCTGGGATGCTGTAGGGTCTCTGATGGTGTAGACAAATATGCTCTGCGTTTTGGAATTATTCAGGGCAGTAGGGCACAATGAGCACTTGATTTTTGATATTTCTATTCTCTAGATGAGTCTAAGCGGTCTATCACTTTGTTTACTCAAGTTCTTCTACTTCGGGATTAGGGGATTTATATGCAATGTCATGATCTTGTTCTCAATATTACTAGCATGGCTGTTTTTCTGTTCCATCTCATTAGTACCCTTTCTAAAATAATTCTTACACTTTATAGCTTGTTAACCCTAAAATCGGTGGTCATTCCAATCCTTTCGTGGATACTGCCTGGGGATTGCAGTCAGTTGCAAGAGCAGCATCTGTGTGATCACACAGTAGCTGTAGCGACCTACTCATTTCTACGCTCTGTTCTTATTCAAATATTCTATGTAAGTTTTTCTCTTTATGCAGTGAAATATATTAAGGATACTGATTGTGTTGCTTTTTTCAAATAATTGTATAATTACTTTTTAACTTCTGCTGAGACTGAAGGTTATCAATTAGAAAATAGCAATTGAATGATAGACCATGGTAACTTGTCTTTTCAGTAGCACACTTAAACTTTAATATTATAACTTCAGTAGGTGGTTGCAGAACTCATGACTTTTGTTACAATGATGGTTCAAAAAGGATATGCTTTCTCTTCAAGGCCGGAAGCCTCAATTATATTTCCCAGTGACATCTTGATGTTTTATATGAAAATTCCTAGATGCAAAATAAGAGTAGTTTTTTCCCCTGATTCCCTGGAAATAACTTCTGTTTTCTGTTAATTTACCTCCCCACCATGACCTTCAGTACTTTATATAGTTTAGTACCTTAATTTATATATGTCCATTATTACATACTTGACAAATAAAAAGGAGAAAATCAAAGTGTTGTGTATTTCTGTTATATGTGGGTTTCTTATAACAGAATATCCTTTTCAGGTATTATGGTTTTATCCACTTTACATCTTCAGCTTCGTGTTGAGTACACTTTGGTACGTTTAGTCTCTGTCCACACTGGATATCTTACTTCCCTTGTTGGCCATACTAGTGGTTTACTTTTCCTTTAAAGGGCAAACACATGGATTGAGTTGATAGCAGAATTACCTAGCAGCAATTGATATAGTATCTGTTTTTACAATAAGTAAATAGAGAAACACAGAATGATCATAACAATGGTACTATGCATGTATGAGCCTATCATACCACAATTAAATCAGTGAATTTCTGTTGAACTTTAGTGCTTCTAAATGTCAGTATTACAATATTTGGTTCAGAAGTTACCCATTTTCAATTTGTGGTACATTTGTTGATTCATACTCTGGGATTATGAGCTCAAACATAAAATGTTTCAGTAAGCCTCCTCAGGGCATTATCATAAATTGCAAAACTTTCTGTTGGATGCACGACGGCACCCACTTTCTGTTTCTTTTATCACCTCATTGATGGTGTTTCGCATAGTTTCATTTGGTAAAACCCACCTGTCTTGTAAGATATTACTGCAGAATTAAGAATCACTGAGTAATCAGATCAAAAGTGTTACAGTAATCTTGTATAGACATTTGTATTAGCAACATAGCTTGAAAATATTCAGATGAGTTTGTAACTCCTATATTTTTGTACCATGCAGATATAATTACTCTCTTTATGCTTTCATTTCTCTAAATCTTAAGTGAGTTCTCTGTGTTGCAGTCCTTGGGTAGTTGGGTTCCAACACTAAACTGTGATTAATAAAATCTAAACCTCGATTTACTCATAGAAACTTATTTACAATTTCTCTATGGAAAGCTCAATTCTTGATTTTTTTTTTCTGCATTGTTAAATTATTACAGGTATGGACTATTGTTTTACCATCCTCAAGATTCCCATATTTCATATACTAAACAGTGGTGAGCCCAATTGTACCTTTTGTAACGTTGGCCATCTCACGTCAGGTATAATGACATTGCTAAGCATGCTTTGGATGTTGTGAAAAGAAAGAGCCTAGATGCAACTAAAGCATTGGATGCTCACACCATATCTGAATCAACAGAGAAACCTGAAGGATTTGATGAGTAGGTTCACATGAAAACTTGTTGATTGCTTGTTGTTTTTTCATGTTCTGCATGTTGACATGCTATTGTTAGGGTTGCAATTGGTATTGGAGAACAGGTCTATTCAATTCTTCTTTTAACTATTTTCTTTATTGAGGTATGTTTCTTTGCTCATGTCTTTTCATTTGTCATGACTCCCTTCACATTTAATTTCACAGAACATGTTTTTTGGCACCTCGTGCTCATTTAAGCTTATCTAGTGCTATTCTTTTATGCTATCTTTTTCCACTGATATTTAAGTTGATGCTGTACAGGTTTCAGTGATTGGTTACATACCTTACTTTGGGAAGCCTATGAATTTCCTGCTATTATCTTTGATGTATGCCTACTACTGCTTCGAGTATGTACATCTTAATGTCTTTAAGCATTCTTTCAACTCCCTATGTCTTATACATTTGCCAGGTTACTTTATTGTTGTAAATTTATTCAAACTTTTCTTGTCAGGTACAAGTGGAACTTCTTTGCAGTGAGCCTGAATGAGCGGCTTGATTTCTTTGAGTCAAATTGGGCCTTTTTTGCTGGATTCGGTATGTTGATGATCAGTCATTGCATACGGTGCAAAATATATGCTTTTGCCTTCTTAGGCCATGATGCGCTGCCTGTTTCAGCTTTGGACTATAATGCAAAGTGATTTTGCATTTTAAAGTTTTGATTTTTAAGAGTAATTTAGGTAGATTTTTACTTGTATTCTTAGCGATCTCAAAAAGATAACTGGACAAAAGTCACAAAAGAGAACTCCTAAAATCCTTATGATTATGCAAATGTAATTGTTGGAAAAGTAATCTAAACTATAAACCTTTTTATTTCTTGTGCATATGTTCTTGGCAAGAAATACATGCATCTCTAATCGCCTTTATGGAAAGTGTTAGTACTTATGGGATCTTAATTCTCTCAGCTTGTGATCATCATGCTTGGCAGTTAGCAGATAAGTCATCTATTGGAAGTAATCCTGTACCAAGCTGAACGTTGAGCAAATTTCTTGTAATTTTCATGGACAAATATATGTCGGATAGGTTCTCAGGCAGTCCTAGCCATTTGCGGCACACATGTTCCTTATAAAGTTTGCAAGATCCTACATAACTGGCCATTGTTGATCTGTTACCTTTATAAATGGCATATGTTACTATGTAATTCTGTTTCTGTACATTGTTCAACTTACTCCGTATATGCTAGCATTTACCCCATATGTGATTCTGACATGTTCTTTGATACCATTTTTATATAGGTAGTCCATGTGTACTTCCAATTTTCTTCTTCTCTCCTCTTACAAGTTATGGTGTAATGGCAATACTTTATCCACTGGTATGGAGAAACACTCACTGGCAGCATTTTTTTGTTTCCATTTAAACAGCATGCAGACATACTTGCTCTTGTAAAATAGGTATAGAAGCTAGACATGGAAAATACCTTAAAAGCACTAACTCATAATGCCATTCCCATTTCTTATTTGGGCCAATTTGTTTGGTTCCATCACAAAAAACACAGAGTTGGAAAATACTGTCACACCTGTCATTGACAGTTGGGTCCAGACACCTCATGTCATGAGTTATGTCACACCTCATGTCATTCTTACATATGATGTTAAATTGTAACTCATTTATCTCTACGATGGTATTTTCCAAATTCTCTTATTAAAAAGAACCCAATTCGCAATTCTACATCCAGTCCTTTTCTCCACCGAAACTGGTGTGGAAACTGGATGAGAAAACAGTATCTGCCTTTGTTCCCTTCCATCTAATAAAATAATATTTCCCATCCAACACATTCTGAGTGCAGTTATGCAATGTTGTCTGTTGCAGTTTGTATTGACTGCTGCAGGTACCCAAGCAGAAAAAGTAATTGATCAACTGAAACCTTCGCATGGAGGGAAACTGCAGAGAATACCTGTGTTCTTCATAGCTAAGCGACTAACGTAAGCACTCCTCATATCACTCATTCAAGAAAATTGCATTGTTATATTATTCAAGGCTTCACAGGAATCATGCCATTTTCTTGTATAGAATTAGCTACCGGTGCTAATGATGTGAGAATATTATTCTTTTACCATATCCATCCAAGTAAAAGTTGGTATTGGTTATTTAGTTCATATTTTCATCTTCTTATAGTCTTAATCCAAATTAGAATTCAGTACAGTATGCTGAGTGTTAGTATTCAGAATTTCAGATTAATTTCCTTTTAGGGATCATCACAGTTTTCCTGCACCACTGCTACTTTAATTCCCCTGGGTGCACTATAATGTATTGAAACTTGTCTGAAACTGTATATGCAGGACTCAAGTGCTGCAATTGTTTCCAGAGGTACAAAAAGAACAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016445