Os08g0109000

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Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0109000| Description = ENTH/VHS domain containing protein| Version = NM_001067342.1 GI:115474420 GeneID:4344467| Length = 4840 bp| Definit...")
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Gene Name

Os08g0109000

Description

ENTH/VHS domain containing protein

Version

NM_001067342.1 GI:115474420 GeneID:4344467

Length

4840 bp

Definition

Oryza sativa Japonica Group Os08g0109000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:444543..449382

Sequence Coding Region

444987..445087,445414..445492,445933..446031,446114..446227,446565..446728
,447584..447659,447849..447934,448053..448208,448281..448611

Expression

GEO Profiles:Os08g0109000

Genome Context

<gbrowseImage1> name=NC_008401:444543..449382 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:444543..449382 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcggaaatggttaaggcggcgacgagtgagaagctcaaggagatggattgggccaagaacatcgaaatctgcgagctcgtcgctcaggatcctgggaaagcgaaggatgtgatcaagccgataaagaagtatttaggtagcaggagcaagaacactcaactttatgctgttatgctgttagaaatgctcatgaataactgcggagaacctatccacaagcaggtcattgataacggtcttctcccgatacttgtgaagattgtgaagaaaaagacagaattaccagttcgtgaaaaaatatttcttttgctggatgcgacccaaacatcccttggtggagttaaagggaaattccctcagtactatggggcatattatgagttggtgtctgctggcgttcagttttcgaatcgcccaaatgttgttgttacacaagcacaagctccagtcccggtcccagaaccaacaatcgaaccaaataataacagtttatctaggagattggacgaaggacagaaggaagtgcatgcgcagcctgtttccgagtcaagtataattcggaaagcttctagtgtcatggaagttctaaaggacgtgcttgattcgatggatcctagacaccctgagggagcaactgatgagtttgtgttggatcttgtggagcaatgcacatttcaaaaacagcgaataatgcatctagttatgacatcaagggatgaagtggtggtatcacaagcaatagaactgaacgaagagcttcacaaggtccttgtacggcatgatgcgttgctttcagttcagccaactacaacagtagcttctactctcaaggaggaagaggaagaagatgccgaaagcctttaccggaggcttcgaaagggaaaagcattatcggaagattatacagatgactccataccatcatttcgatctatacctgaagacaagatgcgccgcccactcaccattgagccatccaacactgataagaaactgggggcactgaatattcgctcgccatatcctgaagcgaggcctgacgtgctgattccaccaccgcctgccaagcacgccgagagggagaggttctttcgggagaagagcatggatgccaacttgctgggccatcttaggggcttatcattgcacagccgggacggcagtagctcgtgtagcggcagcacagattatggagactga</cdnaseq>

Protein Sequence

<aaseq>MASEMVKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIK KYLGSRSKNTQLYAVMLLEMLMNNCGEPIHKQVIDNGLLPILVKIVKKKTELPVREKI FLLLDATQTSLGGVKGKFPQYYGAYYELVSAGVQFSNRPNVVVTQAQAPVPVPEPTIE PNNNSLSRRLDEGQKEVHAQPVSESSIIRKASSVMEVLKDVLDSMDPRHPEGATDEFV LDLVEQCTFQKQRIMHLVMTSRDEVVVSQAIELNEELHKVLVRHDALLSVQPTTTVAS TLKEEEEEDAESLYRRLRKGKALSEDYTDDSIPSFRSIPEDKMRRPLTIEPSNTDKKL GALNIRSPYPEARPDVLIPPPPAKHAERERFFREKSMDANLLGHLRGLSLHSRDGSSS CSGSTDYGD</aaseq>

Gene Sequence

<dnaseqindica>445..545#872..950#1391..1489#1572..1685#2023..2186#3042..3117#3307..3392#3511..3666#3739..4069#ttagcttcttcttcctgcttcctctctctctcttctctcctcctcctcccactgagatccctctcccctccccgccatcgccatggctcccccaccgccgccgccgccgccgtcggaggaagagacgagacactagaaaagacggttcttgaccgagtttgcggccgatccgggtccgtatttccctctgccctctttttctttccatcgatgtgatcctctcatacttgtggttgtagattactgattcctcttcgtttgtccggaaggaatgttcttttcgtgcttgccggctgcggcgccatgagagaaagaggaattatttttgttgttgttgttgtttactcatcttcttctttgtgtgtgtggattataggcttggatttgccacgggaaaggaaggagtttcgggggctgatagagtgaaaggcgacgagggagaagatggcctcggaaatggttaaggcggcgacgagtgagaagctcaaggagatggattgggccaagaacatcgaaatctgcgagctcgtcgctcaggatcctgggtattctcgcgattcccctcttgcatagtgcctcttgactaggttttcatctctagatttctagttatcccgtttagcattgcaagtttgctagttgaggttttggttatctaatccctagtatgcaatagtagtttttttttcctttcccattgatattttagtgtaaagatggatttgtactgaaggagctatcaatcattcattgccagttggcctcaatatttcctttagacaagttatggctcatggtttgccatatggaaagggtgcttttatgtccttgaatggcctatttatgtttatcaacctgttactgtcaccaggaaagcgaaggatgtgatcaagccgataaagaagtatttaggtagcaggagcaagaacactcaactttatgctgttatggtaagttatattttggggaagaagcttcctttatgctctggctcccagattagattagttcacagagacattctcgttaaaaacttgtaagagattagatatgccccgtttatgcaccaacctacgctttctgttcctaatactctgttgcaaatcaccctccaatccttgcttttctttataagggatcatagaagtagttaaagatgtttgcttggctatggagttaattctgcgttttatgcatcacacctacatttttgatctcttagtcttaggtcatatttggtatgttggtacaaactattatcatccttgtatcactacaattaataacctgtcttccatagggaagcttattgaagtcgtaattgtgtggatatctatatcttttttgttaccatacctttaatcttgatttattgtgctatttgttgtagctgttagaaatgctcatgaataactgcggagaacctatccacaagcaggtcattgataacggtcttctcccgatacttgtgaagattgtgaagaaaaaggtgatttgttctcttttctttttccctggaagttggaggaaggttgttgagatgttgacttaacatactatctgtatttcagacagaattaccagttcgtgaaaaaatatttcttttgctggatgcgacccaaacatcccttggtggagttaaagggaaattccctcagtactatggggcatattatgagttggtggtatgtatcatattttaatattttatcttcattaaatgctgtgttgaaaatttggacagcactaagtgaatctgtatagtctatggtttttctttaatatattttttgtcacaaaaaagacctccatgtgctcttcttaatcaattgatcattcctgagaatcgtgaggtcttgtgtactggtatttattgatcgccgcatgatttatgatttgaccacctccacaacactgataggtttatcaattcttgacatattgctataatgttatcttaaaacaggaaatatctatctttttgtatacatctgaagtgatttattgtcttctctttcgtagtctgctggcgttcagttttcgaatcgcccaaatgttgttgttacacaagcacaagctccagtcccggtcccagaaccaacaatcgaaccaaataataacagtttatctaggagattggacgaaggacagaaggaagtgcatgcgcagcctgtttccgagtcaaggtattttctggtttctactttaattatgatatcatgttgtatgtatatgaagcttgcacttttgttgttccaatctcacagtacttacaatacttgatcaaaatttccatgttttagcaattgaaatcgatttttcctagagtaagttcttttctactgaatagtgaaactgatagttgcattaaaatactttcatcaaatgttccatggccagagaaaattgttcctagaacatccagcataattattcaactctttactcacagctgatgatgaactgacagctgcggcccatgacttgttctaatcgtctcaatgtcatttgagcaacaatgccacaagtttactgtgtacaaacattgatgcttttgacataacactgtgggtaatcaaatggtatactctggttttaatatgtaagactcacatgttggtttctagaattgatgcggcattttagattgaaatgtgtgcgtttatagcacttattaattgctattatttttttctgtgtgcatctttggttgctatgaactatccttgttgatgtaccatggtaggagcaaatagcatggtgctgatagaagaaatcgatggttctcaaatggaatatccaggatctaaacacttctttctgcatgatagtattccacatttagtaaattagtagcatgccttatccatagggtgttatgtctagcatatatgcattttctgttgtttattaacactattagagaatataatagtttgatggtgtcacgattgtgatgattattacctctttgtgttaaccattcaactgccttttggcttttcaatcgtttttacagtgtactttggtttatattgcagtataattcggaaagcttctagtgtcatggaagttctaaaggacgtgcttgattcgatggatcctagacaccctgaggtatagatatggtggattgtatcctcatttgcgtgatcaatagtttctttttcatttcttgattgttgtttatagatttacctttttgctttcgtatgcctcctccggggaaaataacttaagaggcaatttatttttctcaagcaccgtgaactcttacatggttatatctgcaactgtattttgtagggagcaactgatgagtttgtgttggatcttgtggagcaatgcacatttcaaaaacagcgaataatgcatctagttatgacatcaaggtaagtgtccactgtttggtgctcttcaatatcttttgacattgctccttcagtccgtgatatgtttataagcagctatttttacattgacatatgagttgctatcctttgttgctagggatgaagtggtggtatcacaagcaatagaactgaacgaagagcttcacaaggtccttgtacggcatgatgcgttgctttcagttcagccaactacaacagtagcttctactctcaaggaggaagaggaagaagatgccgaaagcctttaccggaggtatgtgtattcgttctttatttcttcagtggtggaaggtggccaattactaaattttcctcaccaacacaggcttcgaaagggaaaagcattatcggaagattatacagatgactccataccatcatttcgatctatacctgaagacaagatgcgccgcccactcaccattgagccatccaacactgataagaaactgggggcactgaatattcgctcgccatatcctgaagcgaggcctgacgtgctgattccaccaccgcctgccaagcacgccgagagggagaggttctttcgggagaagagcatggatgccaacttgctgggccatcttaggggcttatcattgcacagccgggacggcagtagctcgtgtagcggcagcacagattatggagactgaggtgtaggtatatgcggtacataaaggattattttttgttcttcaggatgatattctgcttgcccggcaattgatgttgagagaggcagcctcagcctcatcgtcgtcatcttctcgctgaccattgtacacttggttttctaattcttttataattcttcccccttccgcttacctgacattatcggaaagttgaacaatgctgtgttgtgagctttcagttctatagagatgcttgtgtggcaagctgtgtgagtgaccatctgcattggttttactctactttcatctccttttggctttctgatgtgtagtagtggagtagtgctgtgggttttgcttgtgtcagaagcgtgccattcagcttttagccagcagataatggatcagttgagccccatgatcatggtggtgttgtgggtcactcttctcaatagcattgtaaaagattatgcccatgactatgagacacctttctggcaagaccaaagatccactagtatcctggagtaagtatctttgagacaatcttgaatggttaggctggcttgccaaagtatttgactctacctgctagtggagtagagatctggcagattactggtattattttatgttcaagtgggtatgcattctttggaaggcatacatttttttattttctagttacatggggtagcatataggagcaaagatttgtgttgaactgtttgtagaatttgtgtagcaagggaaatgaccaattggacaataggaaaacgatcatcaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0109000, RefSeq:Os08g0109000