BGIOSGA016449

From RiceWiki
Revision as of 04:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016449| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016449, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016449

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016449, complete gene.

LocusTag

OSJNBB0086G13.12

Ensembl Transcript ID

BGIOSGA016449-TA

Ensembl Protein ID

BGIOSGA016449-PA

Length

4409

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:19590059..19594467

Sequence Coding Region

19590059..19590139,19590464..19590646,19591766..19591885,19592210..19592401,19592601..19592906
,19593757..19594467

Genome Context

<gbrowseImage1> name=IndicaChromosome04:19590059..19594467 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:19590059..19594467 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGCGAGGTGGCCATCGACTCCGGCGAGAAGCGCCTCAACGAGCTCGGGTACAAGCAGGAGCTCCGCAGGGAAATGACTCTGTTCAAGACGCTGGCCATCTCCTTCTCGACGATGACGCTGTTCACCGGGATCACGCCGCTGTACGGGAGCAGCCTGCGGTACACGGGGCCGGCCAGCCTCGTCTGGGGCTGGGTCGTCGTCTCCTTCTTCACCTGGTTCGTCGGCTTCGCCATGGCCGAGATCTGCTCTTCCTTCCCCACCACTGGTTCTCTGTACTTTTGGGCTGCTCATCTGGCTGGCCCAGTCTGGGGCCCGTTGGCATCTTGGTGCTGTGCTTGGTTAGAGGCCATAGGTCTTATTGCCGGAATTGGTACACAGGCATTCGCGGGATCTCAAGTTCTGCAGAGCATAATCCTGCTATGCACCGGCACGAACAAAGGCGGCGGCTACCTGACTCCTCGCTGGCTGTTCCTCCTCATGTACATCGGCCTAACCTTCATCTGGGCCGTGCTCAACACCTTCGCGCTGGAAGTCATCGCCTTCCTCGACCTGATCTCGATGTGGTGGCAGGTGATCGGTGGCACGGTGATAGTGATCGTGCTGCCGCTGGTGGCGAAGACGACGCAGCCGGCGTCGTACGTGTTCACGCACTTCGAGACGGCGCCGGAGGCGACCGGGATACGGAGCAGCGCCTACGCCACCATCCTGTCCCTCCTGGTGAGCCAGTACTCCCTGTACGGCTACGACGCGGCGGCGCACCTCACCGAGGAGACCAAGGGCGCCGACAAGAACGGGCCCATCGCCATCCTCTCCAGCATCGGCATCATCACCGTCTTCGGCTGGGCCTACATCCTCGCCCTCACCTTCAGCATCCAGGACTTCAGCTACCTGTTCGACCCGAGCAACGAGACGGCCGGCACGTTCGTGCCGGCGCAGATCCTGTTCGACGCGTTCCACGGCCGGTACGGCTCCTCCGCGGGCGCCATCGCCCTCCTCTTCGTCATCTGGGGCTCCTTCTTCTTCGGCGGCCTCTCCATCACCACCAGCGCCGCGCGCGTCGTGTACGCGCTGTCCCGCGACCGCGGCGTCCCGCTCTCCTCCGTGTGGCGCCGCGTCCACCCGCGCCACCGCGTCCCCGCCAACGCCGTCTGGCTCTGCGCCGCCGCGTGCGCGCTGCTGGGCCTCCCCATCCTGTGGATCAACGTCGTCTTCACGGCCATCACGTCGATCGCAACCATCGGCTGGGTCGGCGGCTACGCCGTGCCCATCTTCGCCCGCATGGTGATGCGGGAGGAGGACTTCTCGCCGGGGCCCTTCTACCTCCGGCGCGCGTCGCGGCCGGTGTGCCTCGTCGCGTTCCTGTGGATCTGCTACACCTGCACCGTGTTCCTCCTCCCGACGGCGTACCCGATCAGCGCCGGCAACTTCAACTACGCCCCCGTCGCGCTCGGCGCCTGCCTCGGCCTCATCGGGCTCTGGTGGGTGCTCGACGCCAGGAGGTGGTTCAAGGGACCCGTCAGGAACATCGACGATCCTCTGAAAGATGGTGGTGGTGATGGCGTCCATAACAATGGCAACAAGGTCTAA</cdnaseq>

Protein Sequence

<aaseq>MAGEVAIDSGEKRLNELGYKQELRREMTLFKTLAISFSTMTLFTGITPLYGSSLRYTGPASLVWGWVVVSFFTWFVGFAMAEICSSFPTTGSLYFWAAHLAGPVWGPLASWCCAWLEAIGLIAGIGTQAFAGSQVLQSIILLCTGTNKGGGYLTPRWLFLLMYIGLTFIWAVLNTFALEVIAFLDLISMWWQVIGGTVIVIVLPLVAKTTQPASYVFTHFETAPEATGIRSSAYATILSLLVSQYSLYGYDAAAHLTEETKGADKNGPIAILSSIGIITVFGWAYILALTFSIQDFSYLFDPSNETAGTFVPAQILFDAFHGRYGSSAGAIALLFVIWGSFFFGGLSITTSAARVVYALSRDRGVPLSSVWRRVHPRHRVPANAVWLCAAACALLGLPILWINVVFTAITSIATIGWVGGYAVPIFARMVMREEDFSPGPFYLRRASRPVCLVAFLWICYTCTVFLLPTAYPISAGNFNYAPVALGACLGLIGLWWVLDARRWFKGPVRNIDDPLKDGGGDGVHNNGNKV</aaseq>

Gene Sequence

<dnaseqindica>1..81#406..588#1708..1827#2152..2343#2543..2848#3699..4409#ATGGCCGGCGAGGTGGCCATCGACTCCGGCGAGAAGCGCCTCAACGAGCTCGGGTACAAGCAGGAGCTCCGCAGGGAAATGGTGCGGTTTTTTTCATTTACCACCGCCCCCTCTTTCTTTCTTTCTCTCTGTTTCTCTTCTGGATTTCAATTTGAAAATGATCGTGGGGGGTTATAAGATCGATAGGAACGATCAGGGAGTCGTGAGATTTGACTAAATTCGTGGCTAATTTCCTCCCGTTCACACCGGAATTCTCTTGCGTGATTTGGCTTTAGTTTCTTCACGGTTTTGCATTTGATCTTTGGATTCTTGGTAGTAGTTAGTTCTCTTCCTTCTCTTCATTTTTGTTCTTCAAGAGATTGATTGATGATATGTTTTTTTTTTCTTGGGCATGTTGTTCTTTAGACTCTGTTCAAGACGCTGGCCATCTCCTTCTCGACGATGACGCTGTTCACCGGGATCACGCCGCTGTACGGGAGCAGCCTGCGGTACACGGGGCCGGCCAGCCTCGTCTGGGGCTGGGTCGTCGTCTCCTTCTTCACCTGGTTCGTCGGCTTCGCCATGGCCGAGATCTGCTCTTCCTTCCCCGTAAGCACACCCCTCCTTCGTTTCTCCTCCCTTTGGCAATACCATTTCTTGGATCGCAGTTTGGCCGTCCTCCTCCATGCCGTGGATAAATTTGCTGAAAACTATAATTGGATTGCAATTATCATGGAAACTTGGTGCTCATCGAGTTGCTCTGTTTAGACATTTGGGTTGTTTAGATTAATGTTATTTCAAAATATACCTTTTTCTTTTCTAAAAGTTGTTAAAAATGTACATACATTTAGTTTTTTACCAAACTTTGATACATATTTAAGGAATCTTGCAAAAATTTAGCACTATTGCCAACTTACCAATCCGACTTAGTTTATTTTAGCAATAAATGCATTTAGTTTTTCGGTAAGGTTTATTTTAGCAACAATCCCTTGGTTTGCTTCTGATACAACTTTCAATGGAACAGTCGACTTTTTGACGGCAAATTTCGATTACGATAGCTAATTTATGTTTGTTTTACTTCAACCCACTACTATAACATTTCGAAGTTGCTTGCTGTCTTGGAATTTAGTTTGCCTTTTAAATTGCAAATTAGTTTGAAATACCTGCCTCTCTACTTAACAGAAGTTATGGTACTATTTCCAATCATAGTGGGCAAGGCAGGCATAACTTACGTAACACTACAGTACTACTTACGTTAGGCCAACATCAACCCCAACTTTAATCACAGTTAGTTTGAATCCCCGTAAAATGTTTGTGACCTTTGTCACTAGCATTACACATTTGTTTTACCTGGGTGATGCTAGCGTTAAGTACTCTCTCACGGCTGTTTTGTTTTTTAGTAGTAGTAGTAGTACTTGTTTCCAGCACTATTGCATCTTTGATTAATTATAAGCCTGCCTGCTGTCACTGTTCTGTTGACTACTCACATTAGTACTACAGCATAGACTCCGCAAACGCGCCATCAGCACATGACATGCATCCTTGAAATTTTTGAAAAAAGAAATAGGTTTTGCAATCCAGTTCTGACTCTTGAGTTGCAATATGGCATGGTTGAAACTTTCAACGCATCATTTTGCTGTACTTACAGTACTCTCTATTTGTTTTGCCGAAGAAAGCTGGCTGTTTCTGATAATCTACTGATGGCATCGTTTTTCCTTTTGAAACCAGACCACTGGTTCTCTGTACTTTTGGGCTGCTCATCTGGCTGGCCCAGTCTGGGGCCCGTTGGCATCTTGGTGCTGTGCTTGGTTAGAGGCCATAGGTCTTATTGCCGGAATTGGTACACAGGTATGCTCTTTTGTCAATTGTTCTCTGTAGTAGAACATGGTCAGTCACACGCTTGATCCTTTTCTAGCTGTGTTCTCATTTCTGGTCAGTACTCAGTAGTATCCATTTTGTTATTAGGTGGAAGCAAATTAAATGTTATCCTAAGAAAACATCAAATCAAATGTTACTGTCCATTTCGGTTGTGGACTTTCAGCACTGCCATGGACTTAAAAATGCAAAGCAATCCGTTACATTTCTCATGCTAAACCTCTTAATTCGTAGCAAAAACCGTCTGTTTGTTCCATTTCTTTGAGCATTTCAATCAACCGTATTGCGCTTGCGCAGGCATTCGCGGGATCTCAAGTTCTGCAGAGCATAATCCTGCTATGCACCGGCACGAACAAAGGCGGCGGCTACCTGACTCCTCGCTGGCTGTTCCTCCTCATGTACATCGGCCTAACCTTCATCTGGGCCGTGCTCAACACCTTCGCGCTGGAAGTCATCGCCTTCCTCGACCTGATCTCGATGTGGTGGCAGGTGACAATCCAACCAACAATCCCTTCCGTGTTCATCCCAAGATCAGTACTCACTCCGTTCTAAAATATAACAACTTGTACTGAATGAGACATAACCTAATACAATGAATCTAGAAGAAGTCTGTCCATCTGGACGGAGGGAGTAGTAGTTAATTTTGATCGAGCTGCCATTGACGATGCTTCTGTGTGTGTGTGTGCAGGTGATCGGTGGCACGGTGATAGTGATCGTGCTGCCGCTGGTGGCGAAGACGACGCAGCCGGCGTCGTACGTGTTCACGCACTTCGAGACGGCGCCGGAGGCGACCGGGATACGGAGCAGCGCCTACGCCACCATCCTGTCCCTCCTGGTGAGCCAGTACTCCCTGTACGGCTACGACGCGGCGGCGCACCTCACCGAGGAGACCAAGGGCGCCGACAAGAACGGGCCCATCGCCATCCTCTCCAGCATCGGCATCATCACCGTCTTCGGCTGGGCCTACATCCTCGCCCTCACCTTCAGCATCCAGGTTGGTACTCCTCATCCTCTTCCTCTTCGTCGAGCTCGGGACAAAAAATCACCTCTTATCTCTTATGATCTAGCTAGGCAGAAGAAGAATCGCTGCACTTAGTTGTTATTAATAATTAAGTGAAAAAAATATAATTGGTATGGTTTAGAACGCATGTTAACAACGCCTTCATCAGTATTAGTTCTTCAAGATAGCTATGATTATCATCGAACATGGAGTTTAGAAAAAAATTGTTCTAGATGAATTTAATGAAGTTTTAAAAATTGGAGTGAAAAGATCCTAACCATATTAGAATACATTGACATAGATTATGTATAATTTTAGGGCCCCTATTTTTTTGGGACTATCTATATTTATAGCGTCATATTTTTCAACAAAAAATAGTCGGCATGTATTTACATTGTAGCTTCCTAAATTACATATGTAATTTTAGTGTATTTACAATATAAATCCCAAAAATACATATATAATTCCTAAAATTACATATGTAAATCCCAAATTTACATATTAATTACATATGTAAGTGATGTATAAGTGATGTGTAACTACTGTGTAAATTCGTATAAATATATAAATAATTATTAATTTTACAACGGAGGTGAAGTGCTAATGAGCTTGGAGCTTGATTAGGTGCAGCTGGTTCTTTCGCATAAGGTGTAAGATGGGTGCATGTGCTTGAAACGAATCTTATCGGAGGATCTCACGGTTAAAACATCCGACTGTAAATTATCCTAAAATATGTCGACATAAATTTAGCAATATCGATTTTTTTTTGTTGCCTGTGCGATCGCACATCTCGCACTTGCCCTAGGAATGGCCTGACATGAACTCTGTTCCTGTGTGTGCGCAGGACTTCAGCTACCTGTTCGACCCGAGCAACGAGACGGCCGGCACGTTCGTGCCGGCGCAGATCCTGTTCGACGCGTTCCACGGCCGGTACGGCTCCTCCGCGGGCGCCATCGCCCTCCTCTTCGTCATCTGGGGCTCCTTCTTCTTCGGCGGCCTCTCCATCACCACCAGCGCCGCGCGCGTCGTGTACGCGCTGTCCCGCGACCGCGGCGTCCCGCTCTCCTCCGTGTGGCGCCGCGTCCACCCGCGCCACCGCGTCCCCGCCAACGCCGTCTGGCTCTGCGCCGCCGCGTGCGCGCTGCTGGGCCTCCCCATCCTGTGGATCAACGTCGTCTTCACGGCCATCACGTCGATCGCAACCATCGGCTGGGTCGGCGGCTACGCCGTGCCCATCTTCGCCCGCATGGTGATGCGGGAGGAGGACTTCTCGCCGGGGCCCTTCTACCTCCGGCGCGCGTCGCGGCCGGTGTGCCTCGTCGCGTTCCTGTGGATCTGCTACACCTGCACCGTGTTCCTCCTCCCGACGGCGTACCCGATCAGCGCCGGCAACTTCAACTACGCCCCCGTCGCGCTCGGCGCCTGCCTCGGCCTCATCGGGCTCTGGTGGGTGCTCGACGCCAGGAGGTGGTTCAAGGGACCCGTCAGGAACATCGACGATCCTCTGAAAGATGGTGGTGGTGATGGCGTCCATAACAATGGCAACAAGGTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016449