BGIOSGA016467

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Revision as of 04:29, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016467| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016467, complete gene.| tag = OsI_160...")
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Gene Name

BGIOSGA016467

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016467, complete gene.

LocusTag

OsI_16025

Ensembl Transcript ID

BGIOSGA016467-TA

Ensembl Protein ID

BGIOSGA016467-PA

Length

4649

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20168085..20172733

Sequence Coding Region

20168085..20168115,20168798..20168913,20169041..20169136,20169257..20169313,20169496..20169648
,20169782..20169866,20170125..20170215,20170352..20170516,20170841..20170960
,20171048..20171132,20171262..20171430,20171729..20172174,20172276..20172466
,20172556..20172733

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20168085..20172733 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20168085..20172733 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATGGCGGCGAATCCAGGTGGTTCAGGAACCTGCAGCGATGCACTATTCCGGGAGCTATGGCATGCTTGTGCTGGTCCGTTGGTCACGGTCCCGAAGCGCGGCGAGCGCGTCTACTACTTTCCCCAGGGTCATATGGAACAGCTTGAGGCGTCTACAAACCAGCAGCTTGACCAGTACCTGCCGATGTTCAATCTACCATCCAAGATCCTATGCAGCGTGGTCAACGTAGAACTCCGGGCGGAGGCTGATTCAGATGAAGTTTATGCTCAAATTATGCTGCAACCAGAAGCTGATCAAAGTGAACTCACCAGTCTGGATCCTGAGCTTCAAGATCTTGAGAAATGCACAGCTCATTCCTTTTGCAAGACATTAACAGCTTCAGATACAAGCACACATGGCGGTTTCTCTGTTCTTAGGAGGCATGCTGAAGAATGCCTTCCTCAGCTGGACATGTCTCAGAATCCACCATGTCAAGAACTGGTTGCCAAAGATCTCCATGGAACTGAGTGGCATTTCCGTCACATCTTTCGTGGACAACCTAGGAGGCATCTGCTTACAACCGGTTGGAGTGTCTTTGTTAGCTCAAAAAGATTGGTTGCTGGCGATGCATTTATCTTCCTGAGGGGTGAAAGTGGTGAGCTACGGGTTGGAGTAAGGAGACTTATGAGACAAGTAAATAACATGCCATCATCTGTCATATCAAGCCACAGCATGCATCTTGGAGTCCTTGCAACAGCTTCCCATGCTATCTCCACTGGAACCCTCTTTTCTGTTTTCTACAAACCCAGAACAAGCCGGTCTGAGTTTGTTGTGAGCGTTAACAAGTACCTTGAAGCTAAGAAGCAGAACTTGTCTGTTGGAATGAGGTTTAAGATGAGATTTGAAGGTGATGAAGCTCCTGAAAGAAGGTTTAGTGGAACAATTATTGGTATTGGGAGTGTGCCAGCAATGTCAAAATCTCCATGGGCAGATTCTGACTGGAAATCTCTGAAGGTCCAATGGGATGAACCTTCGGCTATTGTCTGTCCAGATAGAGTTTCACCATGGGAACTGGAACCATTGGATGCGAGTAATCCACAACCACCTCAGCCTCCATTGAGGAATAAGCGTGCAAGGCCTCCAGCTTCACCTTCTGTGGTTGCGGAACTTCCTCCAAGTTTCGGACTATGGAAACCCCCATCTGAAGCAGCCCAAACTCTCTCATTTTCGGAACCACAACGGGCTCGAGAGATATTTCCTTCTATTCCTGCATCAATCTTCTCAGCATCATCACATGTTGAATTCAATTCAAAGAACGAGCCATCCATACTAAGCAATCAGTTCTACTGGTCAATGAGGGATTCAAAAACTGATTCTTTTTCTGCTAGCACTAACAAAGCAAGAGTTGAAAGAAAGCAAGAACCAACTACTATGGGTTGCAGATTATTTGGAATTGAAATAAGCTCAGCTGTAGAAGAAGCCCTGCCTGCAGCTACTGTTTCAGGTGTCGGTTATGATCAAACTGTTCTCTCTGTAGATGTGGACTCTGATCAGATCTCACAGCCATCTAATGGCAATAAATCCGATGCCCCTGGAACAAGCAGTGAACGTTCTCCTCTGAGTCCCAAAGTAATTATGCAAGGTATGGCAGTTGGGAGGGCTGTGGACTTGACAAAACTAAATGGTTATGGTGATCTTCGCAGCAAGTTGGAGGAGATGTTTGATATACAGGGGGACTTGTGTCCCACCCTGAAGAGATGGCAAGTTGTTTACACCGATGATGAGGATGACATGATGCTTGTCGGGGATGATCCTTGGGATGAATTTTGTAGCATGGTGAAACGGATTTATATTTACTCCTACGAGGAGGCCAAGCTGCTGGCTCCAAAGTCTAAGCTGCCAGTCATAGGTGACACCATCAAATTGAGCAGTATGAACTCATCACATGAATCCGTCGACCTGGACAATCATGCCTCAGTTACTAACAGGGACTGCTAA</cdnaseq>

Protein Sequence

<aaseq>MEMAANPGGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVCPDRVSPWELEPLDASNPQPPQPPLRNKRARPPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFSASSHVEFNSKNEPSILSNQFYWSMRDSKTDSFSASTNKARVERKQEPTTMGCRLFGIEISSAVEEALPAATVSGVGYDQTVLSVDVDSDQISQPSNGNKSDAPGTSSERSPLSPKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPVIGDTIKLSSMNSSHESVDLDNHASVTNRDC</aaseq>

Gene Sequence

<dnaseqindica>1..31#714..829#957..1052#1173..1229#1412..1564#1698..1782#2041..2131#2268..2432#2757..2876#2964..3048#3178..3346#3645..4090#4192..4382#4472..4649#ATGGAGATGGCGGCGAATCCAGGTGGTTCAGGTTCGAGTTCGTGCCTCTCCCACCCATCGCCGCATTTCCCGGTGGAGTTTTTTCTTGCCCCCCTTTTTTCCGGTAGCCGCCGGGCTGTGGCCTGGTTGAAATTTTTGGCGGTGCTTTGGCGTGGAAAAGTTTGGTTCGTTTGAGACCGAGACAATAGTTGATTTGAGTGGACTTGAGTAGTTGACTGGCTTGTGTGTTGAAAAGGTGCCGAAATTTCCCTCTAATTTTGAGCCGATGTCACCGAACCAAAACGAGAAAAATTAGGCAATCCGTTCCCTTCTTTTTTTGCTTGATGAGTAGTTGTTGTCACCCTTGCTGATATGGGTAAACTCTTTGTTCCCACGATTTATGATGTTTGTGTGATATTTTTTTTTGTTTATTTAGTTCCGTAATTCGATGCTTCTGAATTGTGATCCGTCAAATAGGAAAAGCCGATTGATGTTTTCGCTGCTAATTTTGTTCGATTGTTTCAGTTTAGTTTGTAGGTGATGCATTTTTTTTGGCTAGTTTAGCTGATGAATTGGCGCTTCTCTGCTGATGATAAACTGTGTCGGTTTAGTGGATCTTTGTGCGCTTCAACTATGTTTAGGATTTCTCATAATTTATCAAACTTGTTTTCTCAATTCGTCTTTCTTGTTCTGATGACTCAATTTTGTTTTGCGATTCAATTGCTTCTGTGTAGGAACCTGCAGCGATGCACTATTCCGGGAGCTATGGCATGCTTGTGCTGGTCCGTTGGTCACGGTCCCGAAGCGCGGCGAGCGCGTCTACTACTTTCCCCAGGGTCATATGGAACAGGTGCTCACCGATCGGCTTGATCTACGAGTTCTTCATGCCAAATCTCATCGATTAAACTTTTTTTTTACTTAGTTTACGTTTTTTTTTTCACCTCAAAGGCTCAAACTGATCACGGTTTGTTCTATAGCTTGAGGCGTCTACAAACCAGCAGCTTGACCAGTACCTGCCGATGTTCAATCTACCATCCAAGATCCTATGCAGCGTGGTCAACGTAGAACTCCGGGTCAGTGTTTCTTTAATCTGTCTGGTGTAACCTCCCATGTGAGTGTGCTGGAAATCGCCAGTCCGGTTACTGTAGCTCGAAATATTATTCAATGCTTACCGGTTGAGTTCTGCAATGCAGGCGGAGGCTGATTCAGATGAAGTTTATGCTCAAATTATGCTGCAACCAGAAGCTGATGTGAGTATATTCTCTACCCCCCTGCCAATATGTAAGGGGGGATATATATTGCTTTTGCAATGCATGCTATATTGCTACTGTAGTATTTCTGCTTTCTTATTGTAGCAGCCTTTAATGGTTATAAATCATGTCCTTTTGTCATTCACATTGATTGATTTGTTTGCTTGCATTTGCTTGTTCAGCAAAGTGAACTCACCAGTCTGGATCCTGAGCTTCAAGATCTTGAGAAATGCACAGCTCATTCCTTTTGCAAGACATTAACAGCTTCAGATACAAGCACACATGGCGGTTTCTCTGTTCTTAGGAGGCATGCTGAAGAATGCCTTCCTCAGCTGGTTAGTATTAAAAGCATATTATGTCTCCACAGGTTGTTAAGATTGTTATATCCAAGTGTCAAATATCTTCTTGAGTCCTCGTATGTAGCAGTACCAGTTTATGATATTATTGAATAGTGTGGTTGCTTTGCAGGACATGTCTCAGAATCCACCATGTCAAGAACTGGTTGCCAAAGATCTCCATGGAACTGAGTGGCATTTCCGTCACATCTTTCGTGGTTAGCTTGAATCTTATCATTCAGGTGTTCTGTTATGCTTTCAATAAAAGCAGGGCCAGCCATGTGTGGTCTAAAAAAAATCTCATCATTTGGCATGATTCTTCCAATCTTGTTGGCACTATGTTGTCCTTATTATTTTGGTGTAACACTTTATTTCTCAGCCACACATGCTCACCATTGTGTAGTAGCATGTGGAATATATAAGCTGTATATCACTTTCAGGATCGCAATCTCATATCTTTCCATTTTTTTTTACAGGACAACCTAGGAGGCATCTGCTTACAACCGGTTGGAGTGTCTTTGTTAGCTCAAAAAGATTGGTTGCTGGCGATGCATTTATCTTCCTGAGGTACACAATACTAAGCATGTAACTTGAAGGCATTAGGTGCACTTGCATCTATCTCATGACTCAATTTAGTTGCGGATGAATCTAGTCTACAGTTATTACTGGTTTCTTCCGCTAAATATCGTTGAATAACTTTCAGGGGTGAAAGTGGTGAGCTACGGGTTGGAGTAAGGAGACTTATGAGACAAGTAAATAACATGCCATCATCTGTCATATCAAGCCACAGCATGCATCTTGGAGTCCTTGCAACAGCTTCCCATGCTATCTCCACTGGAACCCTCTTTTCTGTTTTCTACAAACCCAGGTTCAATAAATTCTCATTTTGGTTATGCCCTTTGTTTCTGGTTCTTTATTGTATTGAGTTATGGTGCAAATTTTAATAGTAATGGTTGACGTTTAGACCTATATAAAACTGAATTACTGAAATATGGCATTATTTGAATATTGTTTACTCTGCTGAGTGTATGATCATTATCAAAATAAACTTATGTATGATGATTTACCCATCCAGTCATGCATTGTTTTTGATAAAGTGGAGTAATACTTGGGTTATCCTAATTAGCATTATGATGTGCAAGTTTACATTATCTTGCAGACTAAACTTAATGTACATCTATTATGTTCCCAGAACAAGCCGGTCTGAGTTTGTTGTGAGCGTTAACAAGTACCTTGAAGCTAAGAAGCAGAACTTGTCTGTTGGAATGAGGTTTAAGATGAGATTTGAAGGTGATGAAGCTCCTGAAAGAAGGTACAATCTTGAGTTTCTTTCTACATAATTATGCTAGCTTTACTCCTGTAGTTTACGGTGCATATCATAAACATTTCTGTTTCACAGGTTTAGTGGAACAATTATTGGTATTGGGAGTGTGCCAGCAATGTCAAAATCTCCATGGGCAGATTCTGACTGGAAATCTCTGAAGGTAATTCATATTTTAGTTTTGAATTTTGATGGTTAAATTGGAAGATACTTTTTTGAGATGTTTTTTGTCCACTTATGTCTTGGTCTCTTGGTTGGTCCAGATCTGATTCTGTCCTGTAATTATTCGTAGGTCCAATGGGATGAACCTTCGGCTATTGTCTGTCCAGATAGAGTTTCACCATGGGAACTGGAACCATTGGATGCGAGTAATCCACAACCACCTCAGCCTCCATTGAGGAATAAGCGTGCAAGGCCTCCAGCTTCACCTTCTGTGGTTGCGGAACTTCCTCCAAGTTTCGGTAAGAATGAAGTCCTGAACACCTGTGACAATTATGGTTCTGATTCTTGATTACAAGGCTCAGGTCATAGTTGGTGCACATAAACTTTTATATAACTTACTCCCTCCGTTTCACAATGTAAGACTTTCTAGCATTGTTCACATTCATATAGATGCTAATGAATTTATATATATAATAATGTCTAGATTCATTAGCATCTATATGAATGTGGGCAATGCTAGAAAGTCTTATATTGTGAAACCGAGGAAGTAGTGTATTATCCAGCTTAACATTTCAATGCTGGTGCGACTTACATCAGGACTATGGAAACCCCCATCTGAAGCAGCCCAAACTCTCTCATTTTCGGAACCACAACGGGCTCGAGAGATATTTCCTTCTATTCCTGCATCAATCTTCTCAGCATCATCACATGTTGAATTCAATTCAAAGAACGAGCCATCCATACTAAGCAATCAGTTCTACTGGTCAATGAGGGATTCAAAAACTGATTCTTTTTCTGCTAGCACTAACAAAGCAAGAGTTGAAAGAAAGCAAGAACCAACTACTATGGGTTGCAGATTATTTGGAATTGAAATAAGCTCAGCTGTAGAAGAAGCCCTGCCTGCAGCTACTGTTTCAGGTGTCGGTTATGATCAAACTGTTCTCTCTGTAGATGTGGACTCTGATCAGATCTCACAGCCATCTAATGGCAATAAATCCGATGCCCCTGGAACAAGCAGTGAACGTTCTCCTCTGAGTCCCAAAGTCGTCAAGTGAGGAGCTGCACAAAGGTGAGAGTTTGTCACGTATTTCCATTTTCAAGATGCTGAAGCATACAAAGAACTTAATTACTTTTCCTTGTGCAGGTAATTATGCAAGGTATGGCAGTTGGGAGGGCTGTGGACTTGACAAAACTAAATGGTTATGGTGATCTTCGCAGCAAGTTGGAGGAGATGTTTGATATACAGGGGGACTTGTGTCCCACCCTGAAGAGATGGCAAGTTGTTTACACCGATGATGAGGATGACATGATGCTTGTCGGGGATGATCCTTGGGAGTAAGAATCTTTACCTCTTCACATTTGTATATTTGATGCAAGTTTTTGGCATCAAAGTTCTAATCTGATGGTAATGCATGTTGTTGCAGTGAATTTTGTAGCATGGTGAAACGGATTTATATTTACTCCTACGAGGAGGCCAAGCTGCTGGCTCCAAAGTCTAAGCTGCCAGTCATAGGTGACACCATCAAATTGAGCAGTATGAACTCATCACATGAATCCGTCGACCTGGACAATCATGCCTCAGTTACTAACAGGGACTGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016467

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016467&oldid=65361"