BGIOSGA016472

From RiceWiki
Revision as of 04:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016472| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016472, complete gene.| tag = OsI_160...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016472

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016472, complete gene.

LocusTag

OsI_16035

Ensembl Transcript ID

BGIOSGA016472-TA

Ensembl Protein ID

BGIOSGA016472-PA

Length

2190

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20281640..20283829

Sequence Coding Region

20281640..20281717,20283064..20283135,20283222..20283377,20283671..20283829

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20281640..20283829 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20281640..20283829 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCGGAGCACGAGCGAGGCGCCGACGCCGAGGGCGAAGGGGAGCGAGATTCCGGCGGCGGCGACGGCGTTGGCGTGGGACACAGCAGGACAGGAGCGATTCAGAACCATCACTAGCAGCTACTACCGGGGAGCTCATGGGATAACTATCGTCTATGACATTACGGATATGGAGAGCTTCAACAATGTGAAAGAGTGGATGAGTGAAATCGACAAGTATGCCAATGACATCGTATGCAAGCTTCTTGTTGGTAACAAGTGTGATCTGGCAGAGAGCAGGGTTGTTGAAACTGCAGCAGCACAGAAAATCTGGGAGCCAGGCAGCCCTGGAGAGGAAGGCATCCAATCTAGTTCAGATGAAAGGCCAGCCAATTCAGCAGCAGCAGCAGCAGCAGCCACAGAAGAGCAGCTGCTGTTCATCATGATGGCACAATGGTCTGGGAACTTCCATGAGTTGGGATGA</cdnaseq>

Protein Sequence

<aaseq>MARSTSEAPTPRAKGSEIPAAATALAWDTAGQERFRTITSSYYRGAHGITIVYDITDMESFNNVKEWMSEIDKYANDIVCKLLVGNKCDLAESRVVETAAAQKIWEPGSPGEEGIQSSSDERPANSAAAAAAATEEQLLFIMMAQWSGNFHELG</aaseq>

Gene Sequence

<dnaseqindica>1..78#1425..1496#1583..1738#2032..2190#ATGGCGCGGAGCACGAGCGAGGCGCCGACGCCGAGGGCGAAGGGGAGCGAGATTCCGGCGGCGGCGACGGCGTTGGCGGTGCGGTCGGGTCGAGCTCGAGGCCGAGGAGGAAGAGGAAGAAGAGCAAGCCGATGTTGGCGAGCGTGTCGAGCACGGTGAGGCTTTCTTTGGGGAAGACATTGCCAGGTGGTTCTTCTCGGCGTCGTCAGGTGTGGAGTAGGAGGTCCTCCCGCGGCCACCGGTGCCGAGTAGGCCGCGCGCGCTCCGGGCGCCGCGGCCGTCGCCGAGCAAGCCGCGACCGGGAGATGAGAGAAAGGAGGGAGAAAGAGAGGAAGAGAGATGGAGAGCTTACATGTGGGCTCAAGAGATTTTTTGATATTTCACGTGATAACCGAAAATCATTATTTTAATTAGTGCGTTGTCTATTAGTAAATTATCACGTTTATAAAGTGTTTTCTCTCAAAAGTGAGTTTGAGCAGTGTCTCACGGCTAAAACCAAAAAAATCATAGTACCCTGCAGCAGTATAGTACCGCTACACTAGCTAAGATTTTGGCTGTGTTTAGATCCAAAGTTTGGATCCAAACTTCACAGTCCTTTTTCATCATATCAACCTGTCATATACACACAACTTTTCAGTAACATCATTTCTAATTTCAACCAAAATTTAAACTTTGAGCTTAACTAAACACAACCTTCGATGCTATTCACTTTGCATGGTAGAGTGACTGGCTCAGCTTTTGATGCCTGTCTTTAGCCTTCAATGTAGCATGACTGATGTTTGCATGGCCCGATGGCCGGTGATGCTGCCCGCGTGCATGCGGCGAGAGATCGCAGGATCTTCTGACGTGAACTTTTCACTGACATGCGGTTCCGTGGATGGTGGGGCTCACATAATCAGTGTCCGTCCCTCTAACTTGTACATGAGATGATCTCTTTCCGAGATTGCGTGGCGTCCCGCGTGGCAATGTGAGGGACAGTGAGGGTGACAACACTAGTAAGGCCTTGTCTGAATGAGCCACAATTCCAGCCCATACACACATTAAACTAAATGTATACACACATTAATATGGAGGAGTCCATTTAAATATGCTTTCGCCTATTGAAGATATCTAGCCGTGGTTGGTTGCTAGATGTCGCTGAATCTCAGTGTGCTTGGATTTATAAATTACAAGAATTGTATATATTAGAATTAGTTATTTGGGAAAAAATTAGTTCCAGAGCATCTAAATTGTTTTTAGTTCTCGCTGAAAACTAGATTATCTTCTTGGATGAATTTTGGCCTCTTATCTTTCATAGTACCAAAGGGCTTCTGGTATTTCCTATGGATAATCAGCACATCGAATTACGGAATTGACTATGTTGCAAAAGCCAGAAGCTGCACTCTGTAATGTAGTCTGACATTTGGTACGTGCATTGCAAACAGTGGGACACAGCAGGACAGGAGCGATTCAGAACCATCACTAGCAGCTACTACCGGGGAGCTCATGGGATAACTGTAAGTTTTTGCAACCTCTCAACATTTTCTTTTTATACTTTAATGTGTGTTTTCAGTAAACATTTAGTTTCCATGGATGCATCCAGATCGTCTATGACATTACGGATATGGAGAGCTTCAACAATGTGAAAGAGTGGATGAGTGAAATCGACAAGTATGCCAATGACATCGTATGCAAGCTTCTTGTTGGTAACAAGTGTGATCTGGCAGAGAGCAGGGTTGTTGAAACTGCAGCAGCACAGGTCGCATTGCAAACTACCCTATTACACTATGGTCTATGGAAGGCTTATCAATGCAAAAGTTATGTTATATTTTGTTAAGCTAAATGAAAAGGTACAAATCACTGCAGGCTTATGCTGATGAGATAGGCATTTCATTCCTCGAAACAAGTGCTAAGGACTCGATCAAAGTCTAAGAGGCTTTCTTGGCGATGTGTGCCTCAATCAAAAAGCAGTAGGATAAATGACAGTGGATAAGGCTTCAGAGTTTCTTATAAACAAGTTATGCTGCTGAAACTTTTGTTTCTAATTTGCAGAAAATCTGGGAGCCAGGCAGCCCTGGAGAGGAAGGCATCCAATCTAGTTCAGATGAAAGGCCAGCCAATTCAGCAGCAGCAGCAGCAGCAGCCACAGAAGAGCAGCTGCTGTTCATCATGATGGCACAATGGTCTGGGAACTTCCATGAGTTGGGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016472