BGIOSGA016474

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Revision as of 04:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016474| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016474, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016474

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016474, complete gene.

LocusTag

OSJNBA0058G03.4

Ensembl Transcript ID

BGIOSGA016474-TA

Ensembl Protein ID

BGIOSGA016474-PA

Length

4883

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20334769..20339651

Sequence Coding Region

20334769..20334890,20336184..20336259,20336359..20336429,20336564..20337057,20337141..20337301
,20337391..20337594,20338352..20338586,20339056..20339651

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20334769..20339651 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20334769..20339651 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGAGGCAGGGGCGGCACCTGGAGCGGTCGGGGTCGAAGCGGGCGCTCGACGCGGGCGGCGGCGGCGGGGATGACGACGACCGTGCGCCCAAGCGGCCGCGCGTCCCGGCCCTCGCGAGTGTCATTGTAGAAGCCCTCAAAGTAGACAGTTTACAAAAGCTTTGTTCATCACTTGAGCCGATTCTGCGAAGAGTTGTTAGTGAAGAAGTAGAGCGTGCTTTAGCCAAATTGGGTCCAGCTGCAACTCCTGCTAGAATTCAAGGAAGGAGCTCTCCCAAAAGAATTGAAGGTCCTAGTGGTATCAATCTCCAGCTTCAGTTTAGGTCTAGGCTATCACTACCACTATTTACAGGAGGAAAAGTGGAAGGTGAGCAGGGAGCAGCGATACATGTTGTGCTGCTGGATGCAAACACTGGACGTGTAGTCACTTCAGGACCCGAGTCGTTTGCAAAACTGGATGTCCTTGTGCTTGAGGGTGATTTTAATAAAGAGCAAGATGAAGATTGGACTGAAGAGGAATTTGAGAACCATATTGTGAAAGAACGTGAAGGGAAGAGACCTCTTTTAACTGGTGACCTCCAGGTGACTCTCAAAGAAGGTGTAGGGACGATTGGAGAGCTTATCTTCACTGACAATTCAAGCTGGATAAGAAGCAGGAAATTTAGACTTGGTTTGCGAGTCTCTTCAGGATTTTGTGAAGGTGTCCGTGTTAAGGAGGCGAAAACGGAGGCTTTTACTGTTAAAGATCACAGAGGAGAATTGTACAAGAAACACTACCCTCCTGCCCTAAAGGATGATGTTTGGAGATTGGAGAAGATTGGAAAGGATGGTGCATTTCACAAGAAGCTAAACTCAAATGGAATATACACAGTTGAACATTTTCTTCAACTTCTTGTTAGAGATCAACAGAAGCTAAGAACTATTCTTGGCAGTAACATGTCAAATAAGATGTGGGAAAGTCTTGTTGAGCATGCGAAGACATGTGTTTTGAGTGGCAAACACTATATATATTACTCAAGCGATGCAAGAAGTGTTGGAGCAATATTCAATAACATATATGAGTTCACTGGTTTGATTGCTGATGATCAGTACATTTCAGCTGAAAACCTTTCTGAAAACCAGAGGTTGTTTGCGGATACACTAGTGAAACAAGCATATGATGACTGGATCAACGTTGTCGAATATGATGGCAAGGAACTGTTGAGATTCAAGCAGAAAAAGAAATCTGTCACGACAAGAAGTGATACAGCAAAGGCTTCAACTAGCTACCCTTCTTCATATGGTTCGACACACTCACATAAACAATTGACAGGCGGACCTGTGAATATTGAGCAATCATCTATGAGCAGTATGAGTGAAGATGGAACTAGAAACATGTCCAACGGGAGCCTAGCAGCAAGATATGCAGCCAATCCTCAGGACATCTCACAAAGTATCACCATGCCATATGACATGAGTTCATTGAGACCCGAAGAACAGTTCGCTGGTTCTTCGATCCAAACTCAAGCTTCAAGAAGCTCAAACATGCTAGCCTTGGGACCAACACAGCAGCAAAACTTTGAATTCTCAGCACTTGGTCAGTCCATGCAGCCTTCTCCCCTCAATCCTTTTGATGACTGGTCCCGGTTGCAGGAGAACCGTGGAGGCGTTGACGACTACTTGATGGAGGAGATACGGGTAAGGAGCCACGAGATACTAGAGAACGAAGAGGACATGCAACAAATGCTGCGCATCCTGAGCATGGGTGGATCATCAGCCAACATGAATCATGGAGATGGATTCTCCCCCTTCATGCCGTCTCCTGCACCAGCCTTCAACTACGAGGATGACCGGGCTCGCCCGTCTGGTAAGGCTGTTGTTGGGTGGCTTAAGATTAAGGCCGCTATGCGATGGGGCATCTTTGTGAGGAAGAAAGCTGCCGAGAGAAGAGCTCAGCTTGTCGAGCTGGAGGACTAG</cdnaseq>

Protein Sequence

<aaseq>MQRQGRHLERSGSKRALDAGGGGGDDDDRAPKRPRVPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAATPARIQGRSSPKRIEGPSGINLQLQFRSRLSLPLFTGGKVEGEQGAAIHVVLLDANTGRVVTSGPESFAKLDVLVLEGDFNKEQDEDWTEEEFENHIVKEREGKRPLLTGDLQVTLKEGVGTIGELIFTDNSSWIRSRKFRLGLRVSSGFCEGVRVKEAKTEAFTVKDHRGELYKKHYPPALKDDVWRLEKIGKDGAFHKKLNSNGIYTVEHFLQLLVRDQQKLRTILGSNMSNKMWESLVEHAKTCVLSGKHYIYYSSDARSVGAIFNNIYEFTGLIADDQYISAENLSENQRLFADTLVKQAYDDWINVVEYDGKELLRFKQKKKSVTTRSDTAKASTSYPSSYGSTHSHKQLTGGPVNIEQSSMSSMSEDGTRNMSNGSLAARYAANPQDISQSITMPYDMSSLRPEEQFAGSSIQTQASRSSNMLALGPTQQQNFEFSALGQSMQPSPLNPFDDWSRLQENRGGVDDYLMEEIRVRSHEILENEEDMQQMLRILSMGGSSANMNHGDGFSPFMPSPAPAFNYEDDRARPSGKAVVGWLKIKAAMRWGIFVRKKAAERRAQLVELED</aaseq>

Gene Sequence

<dnaseqindica>1..122#1416..1491#1591..1661#1796..2289#2373..2533#2623..2826#3584..3818#4288..4883#ATGCAGAGGCAGGGGCGGCACCTGGAGCGGTCGGGGTCGAAGCGGGCGCTCGACGCGGGCGGCGGCGGCGGGGATGACGACGACCGTGCGCCCAAGCGGCCGCGCGTCCCGGCCCTCGCGAGGTGGGTGCGGGGAACCCTGATGTGGTGTGGGATGGTTTAATGGTTTCATTTGGCTGGCGGGAGGATTTGCGGGTGTTAGTTCGGGCTACTTTACTTTGTATAGTAGCTTAGATTCGCTGGAACTTTGATCCCTAACTTGGTTTGACTGTGAGTTAGATATGGTAACTGCAATTTATAGTGTGAAGGTGCAGGTGTGCTCAGATTTTTTGTTCATGTGCCATTGGTTCCGGCCTAGCAAATATAGTGAATTAGTAGCTGTGTAGATAATGTCAAGTCTGTATTTGAGTAGTACTTGGATTTGTAAATCTGTTCTTATGCTTTCAAAAAGTTAGAACTAGGCGGTATATGTTGAGTGTCTTAGTTTCATTTGGATGGATTAGTTCACTGGATTTTTCTTCCGCACAAAAATTAAGGGTAGGATTGAAGTGAGAGTTCGTTGCTCAAAACTGTAGCTCTAACCACCTTTCCTGCAAAGATAAAAGAGGAAGCTCGAACTTGGTGCCTAGTGAGAGTGTGGGACCAAGGCTCCTCTCAGATTTTCTTTAACCCTCTATGCGAGTAATCCATGTTCCTGTTGTCGTTTGTTGGCAGTACCACCTTGCTAGTTTTCTCAGATTTTTATTTAAGCTAACCCTCTTCTTTACCAATAGATAAGTGAGAACAACTTTTGGACAGTCAGATTAAACGTAGGAACTGCTTAGTGCTTACAAGGATGGTATGCTCAAAATTGTAGTCCATCCACAATTCATCAGATAGCTTATGCCTTGGTTTAGTCTGTTCAACAGTGATATCCATTTCCTGTATACTTTTCAGTGTACTGTCGTACTAAAATCTATACTTTTTAAGTGCACTGTCATACTATGGGTATTTCTTATTGGAACCTCTAGTTTTTCTTTGTTGCAATTAATGAGGACTTACATTACTTCGTTTTTTTAGGTAATGTAGCAACAATTCAGCCCTTGTTTTCCAAATGACTACAGGAGATTTTATGTCATGATATGAGGTTCTGAACAACGGACACAGTTCCTAATAGACAATTGTCAATCAACTATTGAATATCCATTTTATAGGGCTGTATGAAAACCATGTGAAACATACTTCAGTTGATGCATTTTATCTTGATCACCAGTTCTATAACAAAGGCACACAATGACAAACCTAAGATTTTTTTTTTCACATCATTTATGTTGGGTTGAATATGATACCTTTGGGTTACTCTGCATCTTTGACTTTTGTTTTACCATGTTTTAATACTTCTCTGTTAGCTTACTTAAGAAACTTGTCTCTTTGCAGTGTCATTGTAGAAGCCCTCAAAGTAGACAGTTTACAAAAGCTTTGTTCATCACTTGAGCCGATTCTGCGAAGAGTTGTGAGTTGAAAAATATCCTTTTATTATCTGCTGTGGAACCTTTTTATTTACCCATATGGCTGCTTTCATGATTGATCGTCACCCATATTTGCTATGTAGGTTAGTGAAGAAGTAGAGCGTGCTTTAGCCAAATTGGGTCCAGCTGCAACTCCTGCTAGAATTCAAGGAAGGTACAGGATAGTGGAACTTGTTCATTATGGTTACGCCTGTCAATGCATCTAATGCAGGAATACAAATACATGTTTCTATAGTATTATCTGGATTTTCCACATTAAGTTGACCTTCATATCCCAAATAAAAACAGGAGCTCTCCCAAAAGAATTGAAGGTCCTAGTGGTATCAATCTCCAGCTTCAGTTTAGGTCTAGGCTATCACTACCACTATTTACAGGAGGAAAAGTGGAAGGTGAGCAGGGAGCAGCGATACATGTTGTGCTGCTGGATGCAAACACTGGACGTGTAGTCACTTCAGGACCCGAGTCGTTTGCAAAACTGGATGTCCTTGTGCTTGAGGGTGATTTTAATAAAGAGCAAGATGAAGATTGGACTGAAGAGGAATTTGAGAACCATATTGTGAAAGAACGTGAAGGGAAGAGACCTCTTTTAACTGGTGACCTCCAGGTGACTCTCAAAGAAGGTGTAGGGACGATTGGAGAGCTTATCTTCACTGACAATTCAAGCTGGATAAGAAGCAGGAAATTTAGACTTGGTTTGCGAGTCTCTTCAGGATTTTGTGAAGGTGTCCGTGTTAAGGAGGCGAAAACGGAGGCTTTTACTGTTAAAGATCACAGAGGAGAATGTATGATTCCATATACTTTACTGATCTTGTGTAACTGTTACATGTCGTTAACATATAGATCTTAAATTATAATCCCTCTGTAGTGTACAAGAAACACTACCCTCCTGCCCTAAAGGATGATGTTTGGAGATTGGAGAAGATTGGAAAGGATGGTGCATTTCACAAGAAGCTAAACTCAAATGGAATATACACAGTTGAACATTTTCTTCAACTTCTTGTTAGAGATCAACAGAAGCTAAGAACTGTAAGTCTTATTATTCCTCTTTGTAACTTATATTAAGAATTTTGTTTCTTTAAAACTAAAATTTGGTTTTCTTCTTCTGATATTTTCAGATTCTTGGCAGTAACATGTCAAATAAGATGTGGGAAAGTCTTGTTGAGCATGCGAAGACATGTGTTTTGAGTGGCAAACACTATATATATTACTCAAGCGATGCAAGAAGTGTTGGAGCAATATTCAATAACATATATGAGTTCACTGGTTTGATTGCTGATGATCAGTACATTTCAGCTGAAAACCTTTCTGAAAACCAGAGGGTTAGTATATTTTTAATGTTCCTTTAAGGATTAACAATGGAAGTTAAATATCCTAGCACCAGTTATCTTGAATTTTATTTGTCTGGTCTCTTTTGCCCATTCTGAAAGTGTTCGCTTTTCTGAGCAAGAAATTCCCATCATCACTCTTGATTGGAATGTCTGCTACAGTGCCATACTTCTTGGCATAGGCAGAGTACGTAAAAGCACCCAAGCAGTTCTACACTTATTGTGTTGAGGTGCTCGTTACCAATAAGCTCTGATGCTTGGAAGCATTTTTTTTTCAAGAGCACAACACCAAGATTTGAATGGTCATAATATAGTTAACCACTTCATTATATCCAAAAAAATATGCACCAGTTATTGAAATATATTCCTAGTACTGGTTGACCTGTAGATGCTTATTTTGGCCATTTGCACTATCTGAACAGAGAATGGTGATGATTAAATTGTCATAATTCTATTTCAAGAAAAAAAACTCAAAGCTTTTCTTAAGATATATATTGTTCACAATCGTGGTTTGTATCCATTATGCCACTTTGCCCACATTACATAATCAAAGTATAGTGATCTGAAAATATCTCAAATTGTTCCGTGCTACATTGAAATCTGAGTTTTCTCAGCTCTGTTACCCCTCTTATCACCTAAGTCACTGCCAGTCTGCCACTATAAGATGTCAACACTAAATTTTACTGATACTTGTTTTGCGATGGCTGAAATACTTAACCTTTTGTCATTATCTCATTTTACTCAACTGCAGTTGTTTGCGGATACACTAGTGAAACAAGCATATGATGACTGGATCAACGTTGTCGAATATGATGGCAAGGAACTGTTGAGATTCAAGCAGAAAAAGAAATCTGTCACGACAAGAAGTGATACAGCAAAGGCTTCAACTAGCTACCCTTCTTCATATGGTTCGACACACTCACATAAACAATTGACAGGCGGACCTGTGAATATTGAGCAATCATCTATGAGCAGTATGAGTGAAGGTATATGAATTTCTTTTCTTCACCTTTTTTTTAGCCATTCTTCCTGGCCACTGATTTTCTATCTATTAAAACAAAAATATCTTCCCCTTCTTGTGGCCTGAACTGCATGCTTATGTTTCTATTATCTTTACAGGAATGCTCATTTGTGAATATTGTATCTTTTGGATTTCATTGATGTGTTTGATATACGTACAATTTTAATTCTACTTAGTCAAACAACTAAAAACATTTTTAATATTTCTGTTTGACTTCATCTATGCAAATTGTTTTAAAGTAGTCATTTTACTAAATTACATTTAACTTCATGTGCAAAAGAAGATCTGTTACTGCTGTTGCTTTCATCAATTTACTTCCCAAGAATAGCATATGATGTTGCATTTATAAGTTCAGTTAACGATTTTATTATTCACCTTTCTAAGTAATTCATAGTAGCTTGCATATATAAACTATTTTGCTTGTTATTATGCAGATGGAACTAGAAACATGTCCAACGGGAGCCTAGCAGCAAGATATGCAGCCAATCCTCAGGACATCTCACAAAGTATCACCATGCCATATGACATGAGTTCATTGAGACCCGAAGAACAGTTCGCTGGTTCTTCGATCCAAACTCAAGCTTCAAGAAGCTCAAACATGCTAGCCTTGGGACCAACACAGCAGCAAAACTTTGAATTCTCAGCACTTGGTCAGTCCATGCAGCCTTCTCCCCTCAATCCTTTTGATGACTGGTCCCGGTTGCAGGAGAACCGTGGAGGCGTTGACGACTACTTGATGGAGGAGATACGGGTAAGGAGCCACGAGATACTAGAGAACGAAGAGGACATGCAACAAATGCTGCGCATCCTGAGCATGGGTGGATCATCAGCCAACATGAATCATGGAGATGGATTCTCCCCCTTCATGCCGTCTCCTGCACCAGCCTTCAACTACGAGGATGACCGGGCTCGCCCGTCTGGTAAGGCTGTTGTTGGGTGGCTTAAGATTAAGGCCGCTATGCGATGGGGCATCTTTGTGAGGAAGAAAGCTGCCGAGAGAAGAGCTCAGCTTGTCGAGCTGGAGGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016474

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016474&oldid=65368"