BGIOSGA016479

From RiceWiki
Revision as of 04:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016479| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016479, complete gene.| tag = OS04G04...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016479

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016479, complete gene.

LocusTag

OS04G0444800

Ensembl Transcript ID

BGIOSGA016479-TA

Ensembl Protein ID

BGIOSGA016479-PA

Length

3863

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20381785..20385647

Sequence Coding Region

20381785..20382028,20382142..20382238,20382627..20382824,20383270..20383504,20383744..20384071
,20384159..20384429,20384530..20384785,20384869..20385325,20385457..20385647

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20381785..20385647 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20381785..20385647 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCCATCCATGATGGCGCAAGAACGGGGGGAGCCGCTCCTGCAGAGCGGCAATGGCGCCGCCGGCGGGGGAGCCAAGGGGTGGCCGCCGCCGGCGCTGGCCAGGACCGTGCTCAAGGTCCTCATGTGGGCGGTGTTCCTCACCTGGGCCGCCGCGATCTTCTTCTACCCGACCAAGCCCGCGCAGGCGGCGTTCGAGGGTTGGATGGCGGCCACCAAGCAGTCCCTCTTTGGCATCACCGGGAGTATTTTCCTCGCATTCAGCGCGCCGATTCTGATCGTCGCGGCTCTGGCGTACGTCTACATCTCCGCCTTCCCGAGTGACCATATCCATGTGGAGAAGAACAAGCTGAAGACACTGTGTTTCCGGCTCTGGACTTTCCCTGTTCTTGTGGACGGGCCTTTCGGGGTTGTCTCCGCGGTAGAATTCATCGGAATCGTCCTGTTTATCGTCTATGTTGTCTATTCAATGACCTATTACGCTGTGGAGAGCGTGAGTCTCATCTCAAAATTTGGCCAGATTTCGCTTACTTACAGCGAGTTGCTATTGTACATTATTGGCCTCCGGTTCGGATCGATCGGGTTGTTTTGCATGGCTTTCCTGTTCCTCCCTGTCTCAAGGGGTTCAGTTCTTCTCCGGCTTATTGATATTCCATTTGAGCATGCTACTAGATACCACGTCTGGCTCGGCCATCTCACAATGGCTCTCTTCACATTACATGGCCTATGCTATGTGATCGCATGGTCTCTCGAGGGGAATCTACTTGGAGAATTGGCTGCATGGAAAGAAATCGGAGTGGCAAACTTACCCGGTGTGATCAGCTTGGCAGCCGGCCTGCTAATGTGGGTGACATCACTCCACCCAGTGAGGAAGACATACTTCGAGCTCTTCTTCTACACCCACCAGCTCTACATAATCTTCGTCGTGTTCCTGGCATTTCACGTTGGCGACTTCATCTTCAGCTTCTCGGCCGGACCCATCTTCCTCTTCATGCTCGATCGCTTCCTGAGGTTCTGGCAATCCAGGGCCAAGGTGGACATCATCTCGGCCTCATGCCGCCCTTGCGGAACCGTGGAACTAGTCTTCTCAAAGCCAGCAAGTCTCCGGTACAATGCTCTCAGCTTCATCTTCGTTCAGGTGAGGGAGCTGTCGTTCTTGGAGTGGCACCCGTTTAGTGTGTCTTCGAGCCCCATGGATGGAAGATACCACATGTCGATCCTGATCAAGGTGCTTGGATCATGGACTGAAAAACTGAGGGGCATCATCACTGATGCCCAGGAACAGGGCAGGAATGGCTCTGAGTCGGAGACCGGCCGGATCACCGCCTGCATGGAAGGGCCTTATGGGCATGAATCGCCATACCACCTGATGTACGAGAATCTCATCCTGGTGGCCGGAGGCATCGGCATATCACCGTTCCTGGCGATCCTGAGTGACATAATCCATAGGATCGAGGAAGGCAAACCATGCATGCCCAAGAATGTGCTGGTGCTGTGGTCGGTGAAGAAGTCCAACGAGCTCTCGCTCCTTTCTGCCGTCGACGCGCAGTTCATCAGCTCGTCTGTCTCTGACAAGCTACATCTCGACATCCAGGCCTTCGTGACCCAAGAATCCCAACCTCCATTGGAAGAAGGCATTGTTGGGGATGACCAGAAGGCGACCGGCATGTTCGTCAAGAACGGGACGACCATGTCCGGGCTGGTCGGCACCGGGAACAACTTCTGGGCGGGCATGTACTTCGCCGCGTCCACGCTGGGCTTCGTCCTGGCGTACGCGCTGGCGCAGGCGTACTACGTGCGGCGCCTCAACGTGTTCGCGTGGTGGCACCTGGGCCTCGTGTTCGTGCTGTGCATGGCCGCCGGCGTCGCGCTCCCCGGCGGCCTCGTCGTCCTCCTGTGGCACCTGTCCGAGAAGCGGAAGGCGGAGGACGACAGGTGGGACGCCGCCGCCGCCGCCGTCCCGCGCGCACAGGACGGCGAGGAGGAGGCCGAGCAGACAACGAACGGCGCCGACGCGGCCGACGGCGGCGTCAGCCTCGCCGCGGTGAAGACGACGCGGTACGGGTGCCGGCCACAGTTCGAAGCGGAGTTCGCGGCGTTCGCGGAGAAGGCCGGCGGCGGCGCGGCGGACGTGGGCGTGCTGGTGTGCGGGCCGCCGGGGCTGCAGGCGAGCGTGGCGAGGGAGTGCAGGTCGCACAACCTCGGCCGCCGCGGCGGGAGGCGCCGCCGCGCCGGCGCCGTCTTCCATTTCAACAGCCACAGCTTCGACCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MTPSMMAQERGEPLLQSGNGAAGGGAKGWPPPALARTVLKVLMWAVFLTWAAAIFFYPTKPAQAAFEGWMAATKQSLFGITGSIFLAFSAPILIVAALAYVYISAFPSDHIHVEKNKLKTLCFRLWTFPVLVDGPFGVVSAVEFIGIVLFIVYVVYSMTYYAVESVSLISKFGQISLTYSELLLYIIGLRFGSIGLFCMAFLFLPVSRGSVLLRLIDIPFEHATRYHVWLGHLTMALFTLHGLCYVIAWSLEGNLLGELAAWKEIGVANLPGVISLAAGLLMWVTSLHPVRKTYFELFFYTHQLYIIFVVFLAFHVGDFIFSFSAGPIFLFMLDRFLRFWQSRAKVDIISASCRPCGTVELVFSKPASLRYNALSFIFVQVRELSFLEWHPFSVSSSPMDGRYHMSILIKVLGSWTEKLRGIITDAQEQGRNGSESETGRITACMEGPYGHESPYHLMYENLILVAGGIGISPFLAILSDIIHRIEEGKPCMPKNVLVLWSVKKSNELSLLSAVDAQFISSSVSDKLHLDIQAFVTQESQPPLEEGIVGDDQKATGMFVKNGTTMSGLVGTGNNFWAGMYFAASTLGFVLAYALAQAYYVRRLNVFAWWHLGLVFVLCMAAGVALPGGLVVLLWHLSEKRKAEDDRWDAAAAAVPRAQDGEEEAEQTTNGADAADGGVSLAAVKTTRYGCRPQFEAEFAAFAEKAGGGAADVGVLVCGPPGLQASVARECRSHNLGRRGGRRRRAGAVFHFNSHSFDL</aaseq>

Gene Sequence

<dnaseqindica>1..244#358..454#843..1040#1486..1720#1960..2287#2375..2645#2746..3001#3085..3541#3673..3863#ATGACGCCATCCATGATGGCGCAAGAACGGGGGGAGCCGCTCCTGCAGAGCGGCAATGGCGCCGCCGGCGGGGGAGCCAAGGGGTGGCCGCCGCCGGCGCTGGCCAGGACCGTGCTCAAGGTCCTCATGTGGGCGGTGTTCCTCACCTGGGCCGCCGCGATCTTCTTCTACCCGACCAAGCCCGCGCAGGCGGCGTTCGAGGGTTGGATGGCGGCCACCAAGCAGTCCCTCTTTGGCATCACCGGTACAGAATTCTCAAGAAAATCTCCCCAAGTTTTCCATCCCCTCTCTTTCCCCAATTTTGCAATCAAAAGCAAGTGAAAGAACCTAAAGCTTTTTTTTTTTTGGTTCTTGCAGGGAGTATTTTCCTCGCATTCAGCGCGCCGATTCTGATCGTCGCGGCTCTGGCGTACGTCTACATCTCCGCCTTCCCGAGTGACCATATCCATGTGGAGTAAGTCTTTCTTTAATCTTCTCGTGTGTATCTGAGAATTCTGTGGGGGAATCTGGTGTTCCTAGTCAACTTCTATTCTGAATTGTCGGGGATGGAGACGGTTAGTCAGTACAAAAATCACTGGGGATGGATCTGTCGCTGAACATTCAGGCTGTTTGTTGATTTAAGCACACATAATTCTGTGAATAAAATTTGCTTTATGGATAAAATTATATAATTCAGACTGTAGGTGAGCCTGTTTGATATGAAGACCATCACGGTTGATTGAAATCTAACCTCGCAACAGTCAAAGTTCAGAAAGTAGCACTGCATACTTTGTATTCTTATATATTTGAGAGTGACCTGATTCATGCCTACAGCTCACTGTTATTTACCTCTTTGATATCAGGAAGAACAAGCTGAAGACACTGTGTTTCCGGCTCTGGACTTTCCCTGTTCTTGTGGACGGGCCTTTCGGGGTTGTCTCCGCGGTAGAATTCATCGGAATCGTCCTGTTTATCGTCTATGTTGTCTATTCAATGACCTATTACGCTGTGGAGAGCGTGAGTCTCATCTCAAAATTTGGCCAGATTTCGCTTACTTACAGGTATGCTGTAAATACCGTATATGAAGTACTAGTACTATATCTTTTGGGGAAAGAGTAGCCTCTGTGTTAGATAGTTAGAGCAAACGGTGCGATGCACTGAAACTGAAGAACTATGTAATACTGATGCATGCATTGAGTATATGAGTGACAAGAGTTGATTATTACATATATCCTTTTCGTTTCAATATGTAACTAAACCCTATAGGTGCTGAAGTTTTTTTTAGAAAAAAAAGAGAGAACAAGATGCTGAAGTATCGTGTAGTTGAATGTAAGGCAAGTTGTGATGTTCAGAAAAATGTTGGTGGATGAAGACACTACTGCATACATGTACAGTACTGATTTAAAATGTGCAGTTTGTGCTACTATTGATGATATTGCTGAAAATTGTACTACTAACTCAGATATGATCTCAACACACTTCTAACATTCTGTATGCTTTTTGCAGCGAGTTGCTATTGTACATTATTGGCCTCCGGTTCGGATCGATCGGGTTGTTTTGCATGGCTTTCCTGTTCCTCCCTGTCTCAAGGGGTTCAGTTCTTCTCCGGCTTATTGATATTCCATTTGAGCATGCTACTAGATACCACGTCTGGCTCGGCCATCTCACAATGGCTCTCTTCACATTACATGGCCTATGCTATGTGATCGCATGGTCTCTCGAGGGGAATCTACTTGGAGAAGTAAGAATGATTTAGAATCATTCAGGCAAATGATTTGCTATGACCAATGTCCTGTGTGTTAGTTACTGTCCATCTTCTTAAGTAAATAAGCAACAGATAAATCACACTACTGAATACACTGATATATTAAAAAAAACTGTTAAACCTGTTGTTACAACTTACAAGTGTCATCTACTCTGTTTTGGAGGTTGACATCTGGTGCAAACTTTCTAATTTTTTCTTCTTGTTGTTATTGTTAGTTGGCTGCATGGAAAGAAATCGGAGTGGCAAACTTACCCGGTGTGATCAGCTTGGCAGCCGGCCTGCTAATGTGGGTGACATCACTCCACCCAGTGAGGAAGACATACTTCGAGCTCTTCTTCTACACCCACCAGCTCTACATAATCTTCGTCGTGTTCCTGGCATTTCACGTTGGCGACTTCATCTTCAGCTTCTCGGCCGGACCCATCTTCCTCTTCATGCTCGATCGCTTCCTGAGGTTCTGGCAATCCAGGGCCAAGGTGGACATCATCTCGGCCTCATGCCGCCCTTGCGGAACCGTGGAACTAGTCTTCTCAAAGCCAGCAAGTAAAGAACATGTCCTGCATTCTGTTGATCACTGATCCATCGATGTTGCCACAGTTGGTTGAACAGATTTGTGCCTCTGCTCTGCAGGTCTCCGGTACAATGCTCTCAGCTTCATCTTCGTTCAGGTGAGGGAGCTGTCGTTCTTGGAGTGGCACCCGTTTAGTGTGTCTTCGAGCCCCATGGATGGAAGATACCACATGTCGATCCTGATCAAGGTGCTTGGATCATGGACTGAAAAACTGAGGGGCATCATCACTGATGCCCAGGAACAGGGCAGGAATGGCTCTGAGTCGGAGACCGGCCGGATCACCGCCTGCATGGAAGGGCCTTATGGGCATGAATCGCCATACCACCTGATGTGAGCTTTCAGTTAAATCGTAACATTGGTGATTTGGTGCCGATGGCAATTGAATTTTGGCTCAAGAATTCTGTTTTGTGTTGTGCTTGTATTTGTTCAGGTACGAGAATCTCATCCTGGTGGCCGGAGGCATCGGCATATCACCGTTCCTGGCGATCCTGAGTGACATAATCCATAGGATCGAGGAAGGCAAACCATGCATGCCCAAGAATGTGCTGGTGCTGTGGTCGGTGAAGAAGTCCAACGAGCTCTCGCTCCTTTCTGCCGTCGACGCGCAGTTCATCAGCTCGTCTGTCTCTGACAAGCTACATCTCGACATCCAGGCCTTCGTGACCCAAGAATCCCAACCTCCATTGGTAAGAGCATATAGTAGTTCTTGATCAATGCGTTTGTTCCATGAGATTTGTGGCAATTGGCATTTGGCAATTTGTGGTTGCAGGAAGAAGGCATTGTTGGGGATGACCAGAAGGCGACCGGCATGTTCGTCAAGAACGGGACGACCATGTCCGGGCTGGTCGGCACCGGGAACAACTTCTGGGCGGGCATGTACTTCGCCGCGTCCACGCTGGGCTTCGTCCTGGCGTACGCGCTGGCGCAGGCGTACTACGTGCGGCGCCTCAACGTGTTCGCGTGGTGGCACCTGGGCCTCGTGTTCGTGCTGTGCATGGCCGCCGGCGTCGCGCTCCCCGGCGGCCTCGTCGTCCTCCTGTGGCACCTGTCCGAGAAGCGGAAGGCGGAGGACGACAGGTGGGACGCCGCCGCCGCCGCCGTCCCGCGCGCACAGGACGGCGAGGAGGAGGCCGAGCAGACAACGAACGGCGCCGACGCGGCCGACGGCGGCGTCAGCCTCGCCGCGGTGAAGACGACGCGGTACGGGTGCCGGCCACAGTTCGAAGGTACGCCACCACGCACCACACCACACCAATGCCGCGACGCGAACGCCGGCGCGCTGCGCTGTGGGCGACCGGGCCGCGACGTGCTTAATAAACCTGACCTGCGGTTGTTTTCGTTTTCGTTTTGCGTTCAGCGGAGTTCGCGGCGTTCGCGGAGAAGGCCGGCGGCGGCGCGGCGGACGTGGGCGTGCTGGTGTGCGGGCCGCCGGGGCTGCAGGCGAGCGTGGCGAGGGAGTGCAGGTCGCACAACCTCGGCCGCCGCGGCGGGAGGCGCCGCCGCGCCGGCGCCGTCTTCCATTTCAACAGCCACAGCTTCGACCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016479