BGIOSGA016480

From RiceWiki
Revision as of 04:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016480| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016480, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016480

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016480, complete gene.

LocusTag

OSJNBA0027P08.7

Ensembl Transcript ID

BGIOSGA016480-TA

Ensembl Protein ID

BGIOSGA016480-PA

Length

2297

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20387442..20389738

Sequence Coding Region

20387442..20387553,20387687..20387719,20388542..20388770,20389259..20389376,20389460..20389738

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20387442..20389738 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20387442..20389738 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGCGGCTACGGCTCGGTCACAATCGTCCACGACGCGCGCTCCCCCGAGGACGTCTTCCAGGACTTCTGCGGCCGCCGCTCCGGCATCGTCAAGGCCCTCACCATCGAGGTGGAGAAGTTCTACAAGCAGTGCGACCCTGAGAAGGAGAACTTGTGCCTCTATGGACTGCCTAATGGAACCTGGGCAGTGACTCTACCAGCTGATGAAGTTCCTCCTGAACTACCAGAGCCAGCCCTCGGGCATAACTTCGCTCGTGATGGAATGCAGGAAAAAGATTGGCTGTCCCTGATAGCTGTCCATAGTGATTCATGGTTACTGTCTGTGGCATTTTACTTTGGGGCTCGTTTTGGATTTGATAAAAAGGCCAGGGAACGGCTCTTCATGATGACCAGTAGTCTCCCCACTGTCTTTGAAGTTGTGTCAGGAGGTGTGAATACACAATCAAAAACCGCCAACGGCAGTAGCAAAAACAAGTCAGGCTCTAAGCCACCAAAGCGGCCCAATTCTGACAGCAAGCCACAGAAGCAGGTCCAGGCAAAGTATGAGGAAGAGAACGGCGGCAGAGGAAATGGAGGTGATGAAGATCAAGCTGAAACCATTTGTGGCGCCTGTGGTGAGGCCTACGCAAACGGCGAGTTCTGGATTTGCTGTGACATTTGTGAGACCTGGTTCCATGGCAAATGTGTCCGAATCACCCCTGCCAAGGCGGAGCACATCAAGCATTACAAGTGTCCTGGCTGCAGCAACAAGAGGACCAGAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MDGGYGSVTIVHDARSPEDVFQDFCGRRSGIVKALTIEVEKFYKQCDPEKENLCLYGLPNGTWAVTLPADEVPPELPEPALGHNFARDGMQEKDWLSLIAVHSDSWLLSVAFYFGARFGFDKKARERLFMMTSSLPTVFEVVSGGVNTQSKTANGSSKNKSGSKPPKRPNSDSKPQKQVQAKYEEENGGRGNGGDEDQAETICGACGEAYANGEFWICCDICETWFHGKCVRITPAKAEHIKHYKCPGCSNKRTRE</aaseq>

Gene Sequence

<dnaseqindica>1..112#246..278#1101..1329#1818..1935#2019..2297#ATGGACGGCGGCTACGGCTCGGTCACAATCGTCCACGACGCGCGCTCCCCCGAGGACGTCTTCCAGGACTTCTGCGGCCGCCGCTCCGGCATCGTCAAGGCCCTCACCATCGGTACATCTCCGTTTCTCTCTCTCGCTATCGATCAATCTATCTAATGTGTCTCTGGATTCGTTTGGTGTGGGGTTCGTCGCTGATGACTGATGATTTGTTTTTGTTTTTTTTTTGTGGTTTCGTTGTTGCACAGAGGTGGAGAAGTTCTACAAGCAGTGCGACCCTGGTGAGTCTCCTCCGTTGCTTCTAATGTTGATTTTTATCTGTTTAGTACAGCGAGACGGTATTTGATTGCTCTCGCGGTGATTCCATGTAGTTGCTAGCCATCCAATATTTTTACAGTATTGGTTGATCAGATTAGAGGCGACATTAGTAAATTGTTGATGTAAGTTCCTTATGCCTTGTCCGGAATTAAAAAAAAATCTACCTATTAGATCAATTCACGTCATGAGATTGAAAAGCTGGAAGAGATGCATGTTAGGTGACTTATAGGATGCAACAGAAGTGCAGGAAGCAAATTGGACTTGTGCTTATGTTTATGTTTGACCTCGCTGCGATCTATAGAAAATGTAGTGGCTGGTGACAAGGTGTGGTGAAAGAGATTGAGGTCTGGAGCATTAGTCAATAGTTGGGGATTAGGAGCTGCACAGGATCCTGTTTGCCTTGAATTGCTGCCCTGGGATTTGTGGCAAAGTGCATATAGTAATGTTGTGCTCCTTGTCAGCATCCACTTTTTAGTGCTTGTTGGTTCTATTTAATTAATGCTTAGTTGGAAAAAGAAAGGAACCTTCAAATCCTACTTTGTGCATTGTATGTGTTAGAGCAAGTCCTTGATCTTGCTGAGTAAGCCAGATTGTCCTTTTCTATAGTAACCATAGGGCTTGGGTGTGGACCCAGGGCCCAGGCTTGGATTGGGACTGGGACTAAAAGCCCATGGGCCTCAATCAATTTTCACCATACTTTTATTATGCGACAAAACAGGGCGGGGCGGCAGGGATGGTTCCACCCCTGATAGTGCTGATATAAACATGTTCCTTTATTTTGCCAGAGAAGGAGAACTTGTGCCTCTATGGACTGCCTAATGGAACCTGGGCAGTGACTCTACCAGCTGATGAAGTTCCTCCTGAACTACCAGAGCCAGCCCTCGGGCATAACTTCGCTCGTGATGGAATGCAGGAAAAAGATTGGCTGTCCCTGATAGCTGTCCATAGTGATTCATGGTTACTGTCTGTGGCATTTTACTTTGGGGCTCGTTTTGGATTTGATAAAAAGGCCAGGTTTGCTTCTAATTCATTTTTTTCCCTGTTGATTTGCATCACCTTTTCTCAAACTGGTCATTTTAATTCTATCTGTTCTATCACTTTACTAAAGAATTCCCACGTTGCTCTATACTATGTGCAAGGATGCGTGTACTTATATGCTGATTCCAGTGTCATGGTAGACTTGTGAGTCTAGGTTGTTTTACTGACACCTGCCATGATTTAAATCTGATAATTGATCATTTATTAATGATTTGCTCTGTTAGCTATCTTAATTCTCACAAAACCCATATTTTTCACAATAGACTCACTGTTTCATGCATTTATATGAACAGCCAGTACGACCTTCTGTCCACACCTTCTAAACAAAACTTGCTTTATGGTTTGTCCTTTTTTACACAGCAACATAGATAGGAGAATCCAAGGTTCTTTTAGTTCTCTAAAATATGTCAGCTGTGTTAAGGAACTTGATGATGTTGTTAAGAGGCATTTGAATATGGATGCAGGGAACGGCTCTTCATGATGACCAGTAGTCTCCCCACTGTCTTTGAAGTTGTGTCAGGAGGTGTGAATACACAATCAAAAACCGCCAACGGCAGTAGCAAAAACAAGTCAGGCTCTAAGGTAACATATGTCTAACATTTCATGGCTTCTTGCCCGCACGCTAAAACATGCTTTCTGATTATTCATTGTCCTTTCTATTTCAGCCACCAAAGCGGCCCAATTCTGACAGCAAGCCACAGAAGCAGGTCCAGGCAAAGTATGAGGAAGAGAACGGCGGCAGAGGAAATGGAGGTGATGAAGATCAAGCTGAAACCATTTGTGGCGCCTGTGGTGAGGCCTACGCAAACGGCGAGTTCTGGATTTGCTGTGACATTTGTGAGACCTGGTTCCATGGCAAATGTGTCCGAATCACCCCTGCCAAGGCGGAGCACATCAAGCATTACAAGTGTCCTGGCTGCAGCAACAAGAGGACCAGAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016480