BGIOSGA016491

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Revision as of 04:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016491| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016491, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA016491

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016491, complete gene.

LocusTag

OSIGBA0152K17.1

Ensembl Transcript ID

BGIOSGA016491-TA

Ensembl Protein ID

BGIOSGA016491-PA

Length

4030

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20508218..20512247

Sequence Coding Region

20508218..20508554,20509155..20509655,20509883..20510206,20510379..20510464,20510622..20511034
,20511129..20511395,20511494..20512247

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20508218..20512247 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20508218..20512247 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGGGAGGGGCGGGGATGTGTTTCGCGAGCATGGAGGCGGCGGGGAGCAGGGGGATGGGGAAGGGGGCGAGTAGGAGGAGGACGGCGAGGTCGACGGCGCCGGTGGGCGCGCTGGTGGAGCGGGTGGTGGTGGCGCCGGCGCCGGTGGAGCAGCAGCGCGGGGCGGGGCGGCCGGAGGCGCACCCGCAGAGCGTGGCGGCCAGGGCCGTGGTGACCGTGCGGCGGAGGCGCAAGGAGGACGCCAAGGACCGATTCGCCGAGCAGCTCGACGCCCTCGCCGACAGGGTCGGCCGCAGCGTCCTCCTCGAGCTCGTCAGCACGGAGACCGACCCAAGGAAGGGGACGCCGAAGAAGAGCAAGCCGTCGGCGCTGGTGGGGTGGTTCGACAAGAAGGACGTCAAGGCGGAGCGCGTGGTGTACACGGCGGAGTTCGCCGTCGACGCCGGGTTCGGCGAGCCGGGCGCGGTGACCGTGCTCAACCGCCACCAGCGGGAGTTCTACATCGAGAGCATCGTCGTCGAGGGGTTCCCGACCGGCCCGGCGCACTTCACCTGCAACTCGTGGGTGCAGCCCACGCGCGTGAGCCGCGACCGGCGCGTGTTCTTCAGCAACCGGCCGTACCTGCCGTCGGAGACGCCGCCGGGGCTGAGGGAGCTCCGGCTCCGGGAGCTCGCCGACCTCCGCGGCGACGGCACCGGCGAGCGGAGGATCACCGACCGGGTGTACGACTACGACGTGTACAACGACCTGGGCAACCCGGACAAGGGCGTCGCCTCCGCCCGCCCCGTCCTCGGCGGCGAGCAGATGCCGTACCCGCGGCGGATGCGCACCGGCCACGCGAGCGCGGAGAGCAGGGTGGAGTACCCGGAGCCCATCTACGTGTCGCGGGACGAGGAGTTCGAGGAGGGCAAGAACGAGATGCTGTCGGAGGGCGCGATCAAGGCGCTGCTCCACAACTTCATGCCGCTGCTCGTCTCCTCCGTCTCGCCGGACATCCGCGACTTCGCCGGCTTCCACGACGTCGACAACCTCTTCAAGGAGGGCCTCCGCCTCAAGCAGGCGCTCCACGACCAGCTCTTCCAGAAGATCCCCTTCGTCCGCAAGATCCAGGAGAACAGCGAGGGCCTCCTCCGCTACGACACCCCCGACATCATCAAGAAGGACAAGTTCGCGTGGCTGCGTGACGACGAGTTCGCGAGGCAGGCGCTTGCCGGCATCAACCCCGTCAACATTGAGCGTCTCCAGGCGTTCCCGCCGGTGAGCAAGCTCGACCCGGCCGTGTACGGCCCGCCGGAGTCGGCGATCACGGAGGAGCACATCATCGGGCACCTCGACGGCATGTCGGTGCAGGAGGCGGTGGAGGGGAGCAGGCTGTACATGCTGGATTACCACGACATCTTCCTCCCGTTCCTGGACAGGATCAACGCCCAGGACGGCCGGAAGGCGTACGGCACGCGCGCGGTCTTCTTCCTGACGGCCGCCGGCACGCTGAAGCCGATCGCCATCGAGCTGTGCCTGCCGCCGATGACAGACGGCTGCAAGCGCGCCAAGCGGGTGTTCACGCCGCCGGCCGACGCCACCAGCAACTGGCTGTGGCAGCTCGCCAAGGCACACGTCTGCTCCAACGACGCCGGTGTTCACCAGCTCATCAACCACTGGTTGAGGACGCACGCGTGCATGGAGCCGTTCATCATCGCGGCGCACCGGCAGATGAGCGCGATGCACCCCATCTTCAAGCTGCTCAAGCCGCACATGCGGTACACGCTCAAGATCAACGCGCTGGCGCGGCAGATCCTCATCAATGGCGACGGCGTCATCGAGTCGGGCTTCACACCCGGCAACGTCTGCATGGAGATGAGCGCCTTCGCCTACCGGGAGCTATGGCGGCTGGACCAGGAGGGCCTCCCCGCCGACCTCATCCGAAGAGGCATGGCCGTGGAGGACCCGAGCCAGCCGCACGGGCTACGGCTGCTCATCGAGGACTACCCGTACGCCGCCGACGGGCTGCTCCTCTGGTCGGCGATCTCGCGGTGGTGCGAGGCGTACGTGGCGGCCTACTACCCGAGCGACGAGGCCGTGCAGGCGGACTACGAGCTGCAGTCGTGGTACGCCGAGGCCGTGCAGAGCGGGCACGCGGACAAGCGCGGCGCGCCGTGGTGGCCGCGCCTCTCGACGCCCGGCGACCTGGCCTCCCTGCTCACCACCCTGGTGTGGCTCTGCTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTCGGTGGCTACATCCCGAACCGCCCGCCGCTGATGCGCCGCCTGGTGCCCGCCGAGGGCGACCCGGAGTACGCGCACCTCGTCGCCGACCCGCACCGCTTCTTCCTCTCGGCGCTGCCCAGCCTGACGCAGACCACGACGTTCATGACCGTCATCGACACGCTGTCCACGCACTCCGCCGACGAGGAGTACCTCGGGGAGCGCCCCGACGAGGCGTGGACGGCCGACCCGGCGGCACTGGCGGCCGCGCGGGAGTTCGCGGCCGACGTGCGCCGCGCCGAGGAGGAGATCGAGCGGCGCAATGCCGACCCCTCCCGGCGCAACCGTTGCGGCGCCGGCGTGCTGCCGTACGAGCTGATGGCGCCGTCGTCCGGACCGGGCATCACCTGCCGGGGCGTGCCAAACAGCGTAACTATATAG</cdnaseq>

Protein Sequence

<aaseq>MRGGAGMCFASMEAAGSRGMGKGASRRRTARSTAPVGALVERVVVAPAPVEQQRGAGRPEAHPQSVAARAVVTVRRRRKEDAKDRFAEQLDALADRVGRSVLLELVSTETDPRKGTPKKSKPSALVGWFDKKDVKAERVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFPTGPAHFTCNSWVQPTRVSRDRRVFFSNRPYLPSETPPGLRELRLRELADLRGDGTGERRITDRVYDYDVYNDLGNPDKGVASARPVLGGEQMPYPRRMRTGHASAESRVEYPEPIYVSRDEEFEEGKNEMLSEGAIKALLHNFMPLLVSSVSPDIRDFAGFHDVDNLFKEGLRLKQALHDQLFQKIPFVRKIQENSEGLLRYDTPDIIKKDKFAWLRDDEFARQALAGINPVNIERLQAFPPVSKLDPAVYGPPESAITEEHIIGHLDGMSVQEAVEGSRLYMLDYHDIFLPFLDRINAQDGRKAYGTRAVFFLTAAGTLKPIAIELCLPPMTDGCKRAKRVFTPPADATSNWLWQLAKAHVCSNDAGVHQLINHWLRTHACMEPFIIAAHRQMSAMHPIFKLLKPHMRYTLKINALARQILINGDGVIESGFTPGNVCMEMSAFAYRELWRLDQEGLPADLIRRGMAVEDPSQPHGLRLLIEDYPYAADGLLLWSAISRWCEAYVAAYYPSDEAVQADYELQSWYAEAVQSGHADKRGAPWWPRLSTPGDLASLLTTLVWLCSAQHAALNFGQYPLGGYIPNRPPLMRRLVPAEGDPEYAHLVADPHRFFLSALPSLTQTTTFMTVIDTLSTHSADEEYLGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPGITCRGVPNSVTI</aaseq>

Gene Sequence

<dnaseqindica>1..337#938..1438#1666..1989#2162..2247#2405..2817#2912..3178#3277..4030#ATGAGGGGAGGGGCGGGGATGTGTTTCGCGAGCATGGAGGCGGCGGGGAGCAGGGGGATGGGGAAGGGGGCGAGTAGGAGGAGGACGGCGAGGTCGACGGCGCCGGTGGGCGCGCTGGTGGAGCGGGTGGTGGTGGCGCCGGCGCCGGTGGAGCAGCAGCGCGGGGCGGGGCGGCCGGAGGCGCACCCGCAGAGCGTGGCGGCCAGGGCCGTGGTGACCGTGCGGCGGAGGCGCAAGGAGGACGCCAAGGACCGATTCGCCGAGCAGCTCGACGCCCTCGCCGACAGGGTCGGCCGCAGCGTCCTCCTCGAGCTCGTCAGCACGGAGACCGACCCAAGTAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCACCCCCACACATCCTCCTCCGCCGCCGCCTTCACCGCGGCGGCGGCGGCGCAGGTGGCACGAAGCTTCTTCTTCCAATATAGTACCATACCTTTTTTTCTCCATCGGTTTTTAGAATTCCATGCCCCTCGCGTTGCATCTTTGAATTGTTCTCGCGAAATTCGCTTCCCCCTCTTGCCCCCTCGCTTTTTTCTTCTCTTCTCTTTCTTCTCCCCCTCGCTTTCCCATTCGCTCGCGCTGCTTCATCGGCTTCATGGAAGAAGCTGCAGCGGCGAATATTCCAGCTGTTCCATCTTGACCTGTGGCGTTTGTCCTCGAGTCGTCCTCTGTCCAAATGGGCCATCAAGCACCTGTCTGTTGATTTAATTTTGATCCATTTCTTTTCTCTGCAAGTTGCCATTATTTTTTCTCTCTCACATGCATGTGGTGGCAGTAGTACGAGGCATCGATCGAAATTAATCAGGCTATTATCGATCGGAATTGATCATGTGATGCACGCATTGATCGAGCTGAGTGTATCTTTTGGTTTGGGGTTTTGCAGGGAAGGGGACGCCGAAGAAGAGCAAGCCGTCGGCGCTGGTGGGGTGGTTCGACAAGAAGGACGTCAAGGCGGAGCGCGTGGTGTACACGGCGGAGTTCGCCGTCGACGCCGGGTTCGGCGAGCCGGGCGCGGTGACCGTGCTCAACCGCCACCAGCGGGAGTTCTACATCGAGAGCATCGTCGTCGAGGGGTTCCCGACCGGCCCGGCGCACTTCACCTGCAACTCGTGGGTGCAGCCCACGCGCGTGAGCCGCGACCGGCGCGTGTTCTTCAGCAACCGGCCGTACCTGCCGTCGGAGACGCCGCCGGGGCTGAGGGAGCTCCGGCTCCGGGAGCTCGCCGACCTCCGCGGCGACGGCACCGGCGAGCGGAGGATCACCGACCGGGTGTACGACTACGACGTGTACAACGACCTGGGCAACCCGGACAAGGGCGTCGCCTCCGCCCGCCCCGTCCTCGGCGGCGAGCAGATGCCGTACCCGCGGCGGATGCGCACCGGCCGTCCCAGCACCGCCACAGGCAAGTCAACAAACACTTCCCACCACCACCACCACCACCACCACAGTCGCGGCGCCATCGTGCCATAAATTCAGCGACAGCAACGATGGCCTCCCCGACATGGCGGGAATGGGGAGATGGAGCCGTCCTCTCCTCCCCCCGACGCGTCGCTTTCCGTATCCGAACCACTCGATCGCTGACGTTGACGCCGCCATTACTTTGTGCCGCAGACGCGAGCGCGGAGAGCAGGGTGGAGTACCCGGAGCCCATCTACGTGTCGCGGGACGAGGAGTTCGAGGAGGGCAAGAACGAGATGCTGTCGGAGGGCGCGATCAAGGCGCTGCTCCACAACTTCATGCCGCTGCTCGTCTCCTCCGTCTCGCCGGACATCCGCGACTTCGCCGGCTTCCACGACGTCGACAACCTCTTCAAGGAGGGCCTCCGCCTCAAGCAGGCGCTCCACGACCAGCTCTTCCAGAAGATCCCCTTCGTCCGCAAGATCCAGGAGAACAGCGAGGGCCTCCTCCGCTACGACACCCCCGACATCATCAAGAGTAAGCCACGTACCGCCACTCTCTCGGTCATTGGGTGCTCGTCCATGCCTCCCCCATGGCGACGATACGGTTGATACGATACGATACGATACGATACGGATACGGATTTGCACGGCATTGTTTGTACTGACGCTGTCGTTGAATTTTTGTTTGTTTTCTTGGCGTGTTGCAGAGGACAAGTTCGCGTGGCTGCGTGACGACGAGTTCGCGAGGCAGGCGCTTGCCGGCATCAACCCCGTCAACATTGAGCGTCTCCAGGTAAGCCGTGGCGCTCACGACCAACACGGCAAAACTCTGCAACTTCCAAAGCAGAGCTCGCACGAGTTTGTAGTACTAGCTGTTGCTGTCCATGTGCAACACAGTGGAGCTGATTGGTGGTCGCCGTTTTTTTTTTTTTTACTCTTTGCGCGCACAGGCGTTCCCGCCGGTGAGCAAGCTCGACCCGGCCGTGTACGGCCCGCCGGAGTCGGCGATCACGGAGGAGCACATCATCGGGCACCTCGACGGCATGTCGGTGCAGGAGGCGGTGGAGGGGAGCAGGCTGTACATGCTGGATTACCACGACATCTTCCTCCCGTTCCTGGACAGGATCAACGCCCAGGACGGCCGGAAGGCGTACGGCACGCGCGCGGTCTTCTTCCTGACGGCCGCCGGCACGCTGAAGCCGATCGCCATCGAGCTGTGCCTGCCGCCGATGACAGACGGCTGCAAGCGCGCCAAGCGGGTGTTCACGCCGCCGGCCGACGCCACCAGCAACTGGCTGTGGCAGCTCGCCAAGGCACACGTCTGCTCCAACGACGCCGGTGTTCACCAGCTCATCAACCACTGGTAAGTGCTAAAATCCTCTCGACGCAGAATTCAATTAGCATCGCATCAGAATTCAGAAATGGGAGCAGACGAATTGAGCCTTTCGTGTACTCAGGTTGAGGACGCACGCGTGCATGGAGCCGTTCATCATCGCGGCGCACCGGCAGATGAGCGCGATGCACCCCATCTTCAAGCTGCTCAAGCCGCACATGCGGTACACGCTCAAGATCAACGCGCTGGCGCGGCAGATCCTCATCAATGGCGACGGCGTCATCGAGTCGGGCTTCACACCCGGCAACGTCTGCATGGAGATGAGCGCCTTCGCCTACCGGGAGCTATGGCGGCTGGACCAGGAGGGCCTCCCCGCCGACCTCATCCGAAGGTACACGTCGAAATGTTTGCGTTCTTGCAGTGACCACAATGCGGTGCGAGTGCAACGGCGGTGGCTAAATTTGTTTGGTGTTTGGTTGTGTCGTGTAGAGGCATGGCCGTGGAGGACCCGAGCCAGCCGCACGGGCTACGGCTGCTCATCGAGGACTACCCGTACGCCGCCGACGGGCTGCTCCTCTGGTCGGCGATCTCGCGGTGGTGCGAGGCGTACGTGGCGGCCTACTACCCGAGCGACGAGGCCGTGCAGGCGGACTACGAGCTGCAGTCGTGGTACGCCGAGGCCGTGCAGAGCGGGCACGCGGACAAGCGCGGCGCGCCGTGGTGGCCGCGCCTCTCGACGCCCGGCGACCTGGCCTCCCTGCTCACCACCCTGGTGTGGCTCTGCTCGGCGCAGCACGCGGCGCTCAACTTCGGGCAGTACCCGCTCGGTGGCTACATCCCGAACCGCCCGCCGCTGATGCGCCGCCTGGTGCCCGCCGAGGGCGACCCGGAGTACGCGCACCTCGTCGCCGACCCGCACCGCTTCTTCCTCTCGGCGCTGCCCAGCCTGACGCAGACCACGACGTTCATGACCGTCATCGACACGCTGTCCACGCACTCCGCCGACGAGGAGTACCTCGGGGAGCGCCCCGACGAGGCGTGGACGGCCGACCCGGCGGCACTGGCGGCCGCGCGGGAGTTCGCGGCCGACGTGCGCCGCGCCGAGGAGGAGATCGAGCGGCGCAATGCCGACCCCTCCCGGCGCAACCGTTGCGGCGCCGGCGTGCTGCCGTACGAGCTGATGGCGCCGTCGTCCGGACCGGGCATCACCTGCCGGGGCGTGCCAAACAGCGTAACTATATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016491