BGIOSGA016493

From RiceWiki
Revision as of 04:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016493| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016493, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016493

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016493, complete gene.

LocusTag

OSJNBA0064H22.4

Ensembl Transcript ID

BGIOSGA016493-TA

Ensembl Protein ID

BGIOSGA016493-PA

Length

2002

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20524449..20526450

Sequence Coding Region

20524449..20524765,20524916..20525159,20525272..20525451,20526220..20526450

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20524449..20526450 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20524449..20526450 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGGTGGTTCCGGAGGCGGTCCTGAGGCACGGCGACGCGAGGCCCATGCCGGCGGTGGGGATGGGCGTGGCGGAGTACCCGAGCACGCCGGAGAGGACCAGGGACGCCGTGCTGGCGGCGCTCGAGGCGGGCTTCCGCCACTTCGACACCGCCTCCCTGTACCGCACGGAGGCGCCGCTCGGCGAGGCCATCGCGGAGGCCACCCGGCGCGGCCTCCTGGCGTCGCGGGAGGAGGCGTTCGTGACCACCAAGCTGTGGTGCACCCAGTGCCACCCTGACCTCGTGCTCCCGTCCCTCCGGGAAAGCCTACGGAACCTGCAAATGGAGTACGTGGACCTGTACCTGATCCACTTGCCGATCAGCGTCAAGCCCGGGCCAATGGTGTTCCCGGTGAAGAAAGAGGACGTCGTGCCGTTCGACTTCGGTGGCGTGTGGCGGGCAATGGAGGAGTGCCACCGGCTCGGCCTCGCCAAGGCCATCGGCGTCAGCAACTTCACCACCAAGCACATCGACAAGCTGCTTGCAGTAGCAACCATCCTCCCTGCCGTCAACCAGGTGGAGATGAATCCGACCTGGCAGCAGAGGACAGTGAGGGAATACTGTGACGCTAAGGGCATTCGTGTGACGGCCTACTCGCCGCTGGGAGGGCAGAATTTGGGAGGCAGCGCCAATTATGTGATGGAATCCTCGGTGCTCACGGAGATCGCCAGGGCCAGAGGCAAGAGCATCGCACAGGTATCATTGAGATGGATCTATGAGCAAGGAGTGACCCCCATTGCCAAGAGCTACAGGAAGGAGAGGCTTAAAGAAAACCTTGAGATTTTCGACTGGGAGCTGACCGATGAGGACCGGCTCAAGATCAGCCAGATCCCACAGAGAAAGAGGGTTACGGCTGCAAGCTTGTTCTCTCCAGATGGGGAGTTCACATCGGTTGATCTCCCGGACATCGAAATTGTGGAGGAATAG</cdnaseq>

Protein Sequence

<aaseq>MAVVVPEAVLRHGDARPMPAVGMGVAEYPSTPERTRDAVLAALEAGFRHFDTASLYRTEAPLGEAIAEATRRGLLASREEAFVTTKLWCTQCHPDLVLPSLRESLRNLQMEYVDLYLIHLPISVKPGPMVFPVKKEDVVPFDFGGVWRAMEECHRLGLAKAIGVSNFTTKHIDKLLAVATILPAVNQVEMNPTWQQRTVREYCDAKGIRVTAYSPLGGQNLGGSANYVMESSVLTEIARARGKSIAQVSLRWIYEQGVTPIAKSYRKERLKENLEIFDWELTDEDRLKISQIPQRKRVTAASLFSPDGEFTSVDLPDIEIVEE</aaseq>

Gene Sequence

<dnaseqindica>1..317#468..711#824..1003#1772..2002#ATGGCGGTGGTGGTTCCGGAGGCGGTCCTGAGGCACGGCGACGCGAGGCCCATGCCGGCGGTGGGGATGGGCGTGGCGGAGTACCCGAGCACGCCGGAGAGGACCAGGGACGCCGTGCTGGCGGCGCTCGAGGCGGGCTTCCGCCACTTCGACACCGCCTCCCTGTACCGCACGGAGGCGCCGCTCGGCGAGGCCATCGCGGAGGCCACCCGGCGCGGCCTCCTGGCGTCGCGGGAGGAGGCGTTCGTGACCACCAAGCTGTGGTGCACCCAGTGCCACCCTGACCTCGTGCTCCCGTCCCTCCGGGAAAGCCTACGGTATATATATGCTCTCTGTTTTATGGGTAACTCGTGTTATAAAACCAACACTGAAATCAAAATCGGTAGCTAAACGCAAAAGAACGTCGTAGCTCGAAGATCCAAACACGACGAGCACATGATGTTTATGATCTTGTGAGGTCATGTTAGGAACCTGCAAATGGAGTACGTGGACCTGTACCTGATCCACTTGCCGATCAGCGTCAAGCCCGGGCCAATGGTGTTCCCGGTGAAGAAAGAGGACGTCGTGCCGTTCGACTTCGGTGGCGTGTGGCGGGCAATGGAGGAGTGCCACCGGCTCGGCCTCGCCAAGGCCATCGGCGTCAGCAACTTCACCACCAAGCACATCGACAAGCTGCTTGCAGTAGCAACCATCCTCCCTGCCGTCAACCAGGTTAATTAACTAATTGCTCTTCATTCGCTTGGGCTGGATAATTAGTTGATCTCTTATTAGTATTTGTTACTCATAAACCGCATATATTCCCGGCCTGTGCATGGATCTGCAGGTGGAGATGAATCCGACCTGGCAGCAGAGGACAGTGAGGGAATACTGTGACGCTAAGGGCATTCGTGTGACGGCCTACTCGCCGCTGGGAGGGCAGAATTTGGGAGGCAGCGCCAATTATGTGATGGAATCCTCGGTGCTCACGGAGATCGCCAGGGCCAGAGGCAAGAGCATCGCACAGGTAGGCTTGTATCGTGTGTGTGCGCCGGACGATCATATCATAATTTGAGCGAGGGGGATGACAAGTGGGCCCATGTACTTTTTTCTATTTATTTAGCTGGCTGGATTGCCATTGTGATGCTACGTGTGTGCAATCTCAGGTCAAAACTGCTCTAAAACGATGGGGGGGGGGAGGGTGGCGTTATCCGGTATTAATAGTCAAAAGTGAAAGATGTCTGGTTTTCGGGTTTGGTGGGATAATTCGTATTCACTCAATAGTTCAAAGGGTAATTCAGACTTTTCCCTATATAATATTATGATAGCATTTTAAAGACAAATCTACATATGCCATTTTTTCAACTAATTATTTAAGGAATTAATGATAGTTATAGTTTAAAATTTTAATCAAAATTTATCCTAAATATTTGTAAATATTTATGACCAAAGAGTGTAGAATATGATTATCTGCTTTATATAGTACTCCCTCCATTTCAGATTATAAGTCATTTTGATTTTGGTCAAAGTCAAACTACTTCAAGTTTAACCAAATTTATAGAAAAAAAAGTAGTAACATTTTTAAATATTATTATATTTTGTATATAAACTTAGTCAAACTAAGGTTAAAACAACTTATAATCTAAAATGGGGAGTACTACCTAGCTGGTTTATGTAATTCATTGTACCATTTCAAATGTAGGGATACTGTCTATTGCTGAAAAATGAAAGGATCTTACTTCTCTAAAAATAAAAACTCTTAGGAATTGCTTCTTTTTCTTCCATCCTCCTTCAGGTATCATTGAGATGGATCTATGAGCAAGGAGTGACCCCCATTGCCAAGAGCTACAGGAAGGAGAGGCTTAAAGAAAACCTTGAGATTTTCGACTGGGAGCTGACCGATGAGGACCGGCTCAAGATCAGCCAGATCCCACAGAGAAAGAGGGTTACGGCTGCAAGCTTGTTCTCTCCAGATGGGGAGTTCACATCGGTTGATCTCCCGGACATCGAAATTGTGGAGGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016493