BGIOSGA016500

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Revision as of 04:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016500| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016500, complete gene.| tag = OSIGBA0...")
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Gene Name

BGIOSGA016500

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016500, complete gene.

LocusTag

OSIGBA0152K17.14

Ensembl Transcript ID

BGIOSGA016500-TA

Ensembl Protein ID

BGIOSGA016500-PA

Length

4279

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20569623..20573901

Sequence Coding Region

20569623..20569919,20570971..20571332,20571417..20571460,20573204..20573418,20573492..20573616
,20573841..20573901

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20569623..20573901 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20569623..20573901 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGTCGTCTCCGAGAGCTCGCGCAAGGCGCTGCTGCCCAGCTTCCTGTACGCGGCCCCTGCCGCCTCCTCGTCGCCGTCGTTCGCGGCCGCCGCAGCCGTGGGTGTACGTGGGGTCCCCGCGCCGTCGCTGGCGGGGCCGGCGGTGTGGGCGCGCTCGCCGAGAGAGCCGGCGGGGAAGATTGAGATGTACTCGCCGGCCTTCTACGCCGCGTGCACGGCCGGCGGCATCGCCAGCTGCGGGCTCACGCACATGACCGTCACGCCGCTCGATCTCGTCAAGTGCAACATGCAGATTGATCCAGCCAAGTACAAGAGTATCTCATCTGGGTTCGGTGTTCTCTTGAAAGAGCAAGGAGCAAGAGGTTTCTTCAGAGGATGGGTGCCCACACTGCTTGGTTACAGTGCTCAGGGCGCGTGCAAGTTTGGTTTCTATGAATTTTTTAAGAAGTACTATTCGGACATTGCTGGGCCTGAGTATGCAGCTAAGTACAAGACATTAATTTATTTGGCTGGATCTGCTTCTGCTGAAGTAATTGCAGATATTGCACTCTGCCCCATGGAGGCTGTGAAGGTTCGTGTGCAGACACAACCTGGCTTTGCGAGAGGTTTATCTGATGGTCTTCCAAAGTTTGTCAAGGCAGAAGGCTATGCTGGATTGTATAAAGGGATTGTTCCACTCTGGGGGCGACAAATTCCTTATACTATGATGAAGTTTGCGTCTTTTGAAACCGTTGTTGAGATGATATACAAATATGCAATCCCTGCCCCCAAGAGTGAGTGCAGCAAACCACTGCAGCTCGGTGTGAGCTTTGCAGGTGGTTACATTGCAGGGGTGTTCTGTGCAATAGTTTCACACCCTGCGGACAATCTTGTGTCTTTCCTCAACAATGCCAAGGGCGCAACAGTTGGCGATGCTGTGAATAAGCTTGGTATGTGGGGTCTATTTACGCGTGGACTCCCTTTGCGTATCGTGATGATCGGTACTCTCACTGGAGCGCAGTGGGGACTCTATGACGCTTTCAAAGTGATGGTTGGACTGCCAACTACTGGTGGAGTTGCTCCAACACCAGCCATTGGTGAAGAGCAGCTGAAGGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MAVVSESSRKALLPSFLYAAPAASSSPSFAAAAAVGVRGVPAPSLAGPAVWARSPREPAGKIEMYSPAFYAACTAGGIASCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGARGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFVKAEGYAGLYKGIVPLWGRQIPYTMMKFASFETVVEMIYKYAIPAPKSECSKPLQLGVSFAGGYIAGVFCAIVSHPADNLVSFLNNAKGATVGDAVNKLGMWGLFTRGLPLRIVMIGTLTGAQWGLYDAFKVMVGLPTTGGVAPTPAIGEEQLKA</aaseq>

Gene Sequence

<dnaseqindica>1..297#1349..1710#1795..1838#3582..3796#3870..3994#4219..4279#ATGGCCGTCGTCTCCGAGAGCTCGCGCAAGGCGCTGCTGCCCAGCTTCCTGTACGCGGCCCCTGCCGCCTCCTCGTCGCCGTCGTTCGCGGCCGCCGCAGCCGTGGGTGTACGTGGGGTCCCCGCGCCGTCGCTGGCGGGGCCGGCGGTGTGGGCGCGCTCGCCGAGAGAGCCGGCGGGGAAGATTGAGATGTACTCGCCGGCCTTCTACGCCGCGTGCACGGCCGGCGGCATCGCCAGCTGCGGGCTCACGCACATGACCGTCACGCCGCTCGATCTCGTCAAGTGCAACATGCAGGTGAGATTCACGCAAATTTCCCTGTTCGATTCGGATTGCAACTGTCGTGACTCGTCTACTACTACTACGTAGAAGCTTTCTGGGTTGTGATCGCATTAAATTTATGAATGCTGCCGCACACATAGCATGTTGATGATGCATTGGTTCTGTTGGTCAGTTTGAGATTTCGGTTCGTCATTTGGATCACCTGGCGATCCGTAGTTCTTATGTAATCCGGGTTTGAAGTCTTGGCATCATGCATTCATGCAAGGTTATAATGAGTATCGCCTGCAATGATTCTGAACATGAATGTTCTATCTGATCCTTCAAGGCATACAATTTCTTGTATGTACTTCCTTTCAATTTGCAGTTGGCTACCATTATTTACACATTGTTTAGCAGTTTGTTGTAACATTAACTACATGGGTACATGTACCCTTAGTCTTTGAGCAGAGCCAGGAGTGAGTCATGTTAGATGATGTTCACCTATGCATATATATATATAGAGGAGGGAGAAGGATAAATCCCCCTCGACCCTTCTCTTAAATAGATCTAATAAGCGTAGTTGGGTGCATTCCAAGTGACTATTCCAGGACATATTCCTTTGGTATCCTAAGGATATTCTCCTAGGAGACGCCGTAGGAGACATCGTTTGTGCTCATTGCTTTGCTTGTATATTGTCACTGTTATGAACCAACTACCAAGCAATAACGAACCATTGCAACTTATCTTTTGCGGTGTTCATAATTGCAAATTTGCAGTTGATTTATAGGTCGTGTTGCATGTCTATGTGTTTTGTCGATGTATCTTGGATTCGTTGGTGGTTTCTGACCCTGTGACTGAACGACCCTCAGGCTAGTTGTTCTGTGATATGCAAATGTAGGCATGCATTGTCAAATAAAATCATTTTTAATTTGATTGAAATTATACTGATTGCAATTTCATGTCTATCTCGTGTTTGTACCCCCTAGATTATGCGTTTGATGCATTGGCATGGAATTGCTAACATGCTGTTTATGGTCACATTAGTCATTTCTCCGAATCAATTATTTTCCGTTCTTTGATTTCTCAGATTGATCCAGCCAAGTACAAGAGTATCTCATCTGGGTTCGGTGTTCTCTTGAAAGAGCAAGGAGCAAGAGGTTTCTTCAGAGGATGGGTGCCCACACTGCTTGGTTACAGTGCTCAGGGCGCGTGCAAGTTTGGTTTCTATGAATTTTTTAAGAAGTACTATTCGGACATTGCTGGGCCTGAGTATGCAGCTAAGTACAAGACATTAATTTATTTGGCTGGATCTGCTTCTGCTGAAGTAATTGCAGATATTGCACTCTGCCCCATGGAGGCTGTGAAGGTTCGTGTGCAGACACAACCTGGCTTTGCGAGAGGTTTATCTGATGGTCTTCCAAAGTTTGTCAAGGCAGAAGGCTATGCTGGGTAAGTTGATAGGGTCTTGTAAATCACATTGTTCAGTAAGCGGGTCTCTAACATCAGTCTTCCAACTCAATGTTTACTGTGCAGATTGTATAAAGGGATTGTTCCACTCTGGGGGCGACAAATTCCTTGTTAGTACCTATCTCCTTTTTAAGAATTTGCACATGTAGCGACGATTGTCTAATTTTTAAAGTCAGTTAGTGATCATTTTACATAAAATGTATAAATTTTTAGTGCAAAACCTGATTCATGCAGCTTATCCTGTTATTGAAGGGATGGGAACTCCTGAGATACTTGTTTTTTATGTAGTGTACAATGGGCATGCATGAATGATTAAGTGGTTCATTCATGACTTTGCCATGAAAGAGTACAATTGAGTTAAAAACATAATTTCAATGTTTCCATTACAGCAATGCACATAGTTCTTCTTGAAATCACCCAATGGTTTCAAGTTTTTATGTGTGCATATATTGATTTTTCCACACTGCTTGAGCTATCTCTATTACACTGGACCTAGACTCCAATGAAGTGGTATACATTGATTACTGGTATTATTTCAATTATTTTGTACCAGCAGTTATTATGATATGATGTGTTGCAGATGATGTCTTATGATCTGTCATCTTTGTTGTAATGTCATTTTTTTTTCATAATGGTGAAAACTGTTGGCCTTGAACAATTATTTAACATGATTGCAAGCACCAGTGCTCTATGAATTCTTTGTACATATTTAATGGCAACTCCAGTTTAGTCTTGTAGGATTTTTTTTTGGGTGCACATAGTTCTTCTTGCAATCATACCATGGGTTACAAGATTTTATGTGTGCATATATATACTATCCACACTGCTTGAGTTATCTCTTCTATGTTGGAGATAAACTCCAATGAAGTGGTGTACATTTATTTAAAATAAGCAAATTGAATTTCTTGTGGGGAATTTTCTGCCTTTGTATATTTAGTACCCATTTTGATTTTAAGTTGTGGGCAATTGATCTTGAGACATACAATGTTTCATGGCAATTCCAGTTTAGTCTTGTAGGATTTCTTTTTTTGGTGCACATTAGTTCTTGCAATCGTACCATGGTTTACAAGATTTTATGTGTGCATATATAAACTATCCACACTGCTTGAGTTATCTCTTCTGTTTTGGAGGTAAACTGCAATGAAGTGGTGTACATTTATTTAAAATAGACGAATTGAATTTATTGTGGGGAATTTTTCTGCCTTTGTATGTTTAGGACCCATTTTGATCTTAAGTTGTGGCAATTGATCTTCAGATGTCCATGCAATGTTGAAGTACATTTCGAGCAGCATCCAAGATACTTTTGAGTGATGCTATCATGCTGTCTATATCTGCATGCTTGGACATAAAGGCCTTGCATTTTTTGTGCACATTGTTCTTCTGGAGATCACACTATGATTTTCAAGATTTTATGTGTGCATATATAAATTTTCCACACTGCTTGAGTTCTCTCTATTACTATGGAGCTAGACTCCAATGACGTGGTGTACATTAAACAACTGCCTAACTCATGTGAATCTTATATCGCTTGCAGCCTGCAGCAAACACCTAGTTTAATGATTTTCTCTTTTAGTTTGGATATCTGTCTGCTCAACTTATCTCCTTTTTTGTAGCAATGTCCAATTTGGTGATTTACATGAGGATAGTTCATCAGCTGTATGTTCAGCAATTAAATAAGTCAATACATTTGATGTTGGGATTTTACATTCTAGGTTCTCTGTTGTGATTGTAAATTAGTTTTTGCTATGATACTGAGCACTGATATTCAGTATGCAGCAATCAGATTGTTATCCCGTTGAGCCTTGAGTGCTTTTCATGAAATTTAATTAATTTGACCATTTTATGATACACAGATACTATGATGAAGTTTGCGTCTTTTGAAACCGTTGTTGAGATGATATACAAATATGCAATCCCTGCCCCCAAGAGTGAGTGCAGCAAACCACTGCAGCTCGGTGTGAGCTTTGCAGGTGGTTACATTGCAGGGGTGTTCTGTGCAATAGTTTCACACCCTGCGGACAATCTTGTGTCTTTCCTCAACAATGCCAAGGGCGCAACAGTTGGCGATGTAAGTTTTGTAATCACCATACCATCTTCTGTAACGTGTTTGTTGGATTTATTATTTCTTGTTGCATTTACAGGCTGTGAATAAGCTTGGTATGTGGGGTCTATTTACGCGTGGACTCCCTTTGCGTATCGTGATGATCGGTACTCTCACTGGAGCGCAGTGGGGACTCTATGACGCTTTCAAAGTGATGGTTGGACTGTAAGTGTTCCTCTTTGTTGATTCTGGCCTCTGCCAACATTGATATTGACCAACTTCAGGAAGATTTATTTGGTTTGTTCTCTTCTAGGCCAACTACTGGTGGAGTTGCTCCAACACCAGCCAAGTGATGGTTGGACTGTAAGTGTTCCTCTGTTGATTCTGGCCTCTGCCAACATTGATATTGACCAACTTCAGGAAGATTTATTTGGTTTGTTCTCATCCAGGCCAACTACTGGTGGAGTTGCTCCAACACCAGCCATTGGTGAAGAGCAGCTGAAGGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016500