BGIOSGA016502

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Revision as of 04:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016502| Description = Zeaxanthin epoxidase, chloroplastic| Definition = Oryza sativa Indica Group BGIOSGA016502, complete gene.| tag = OsI_...")
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Gene Name

BGIOSGA016502

Description

Zeaxanthin epoxidase, chloroplastic

Definition

Oryza sativa Indica Group BGIOSGA016502, complete gene.

LocusTag

OsI_16086

Ensembl Transcript ID

BGIOSGA016502-TA

Ensembl Protein ID

BGIOSGA016502-PA

Length

4111

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20579414..20583524

Sequence Coding Region

20579414..20579889,20580326..20580488,20580595..20580669,20580754..20580854,20580940..20581055
,20581145..20581356,20581485..20581576,20581772..20581862,20582106..20582209
,20582333..20582378,20582459..20582523,20582644..20582724,20582808..20582862
,20583056..20583144,20583235..20583322,20583444..20583524

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20579414..20583524 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20579414..20583524 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCACTCCCAAGCTCCAGCTCAACGCGGGCCACCTCTCTCGTGGCGATCCCGGGCGCCTCCTGCCCCCATGGCCAGGCGCAACGCCTGCTCGCCTTCCGTCCCCCACGACGCGGGTCACAGTGGCGCGGGCTTTGCGTGTCCCGGGGGCGCCACGGGGCGACCGTCGCCATGGCAATGCCGGCGGCGCAGGCGGCGGGGCGCAGGGCGCGCGTCCTGGTGGCCGGCGGCGGCATCGGCGGCCTGGTCTTCGCGCTCGCGGCCAAGCGGAAGGGGTTCGAGGTGGTGGTGCTGGAGAGGGACATGAGCGCCGTGCGCGGGGAAGGGAAGTACCGGGGCCCGATCCAGCTGCAGAGCAACGCGCTCGCGGTGCTCGAGGCCGTGGACGCCGGCGCCGCCGACCAGGTCATGGACGCCGGCTGCATCACCGGCAACCGCGTCAACGGCATCGTCGACGGCGTCTCCGGCTCCTGGTACATCAAGTTTGATACATTTACTCCTGCAGCTGAGCGAGGTCTCCCAGTTACAAGGGTTATTAGCCGAATGACGCTGCAGCAGATTCTTGCTCGTGCGGTTGGTGATGATGCTATACTGAACGATAGCCATGTTGTTGATTTCATAGATGATGGCAACAAGGTAACTGCAATTTTGGAGGATGGCCGGAAATTTGAAGGTGACCTTTTGGTTGGTGCTGATGGAATATGGTCAAAGGTGAGGAAGGTGCTTTTCGGGCAATCAGAAGCAACTTATTCAGAATATACTTGCTACACTGGCATTGCAGACTTTGTGCCTCCTGACATTGACACAGTTGGGTACCGTGTATTTCTTGGTCACAAACAATATTTCGTCTCCTCAGATGTCGGTGCTGGAAAAATGCAGTGGTATGCATTTCATAAGGAACCTGCTGGTGGCACTGATCCTGAAAATGGTAAAAAGAAAAGATTGCTCGAGATATTTAATGGTTGGTGCGATAACGTCGTTGATCTGATAAATGCAACTGATGAGGAAGCAATTCTTCGCCGGGATATATATGACCGACCACCTACTTTTAACTGGGGAAAAGGTCGTGTCACTTTGCTAGGTGACTCTGTACATGCTATGCAGCCAAATCTGGGTCAAGGTGGCTGCATGGCTATTGAGGATGGTTACCAGCTGGCTGTAGAACTTGAGAAGTCCTGGCAGGAGAGTGCGAAGTCTGGAACTCCTATGGATATAGTTTCCTCCTTGAGGAGATATGAGAAGGAGAGAATACTACGTGTTTCTGTTATACATGGGTTGGCAGAATGGCAGCAATCATGGCTACCACTTATAGACCATACTTGGTTTTTAACGAAGTTGAGGATACCACATCCTGGAAGAGTTGGTGGGAGATTCTTCATCAAGTATGGAATGCCTTTGATGTTGAGCTGGGTTCTAGGAGGAAACAGCACGAAGTTAGAAGGAAGACCGTTAAGCTGTAGGCTTTCTGACAAGGCAAATGACCAGCTTCGTCGATGGTTTGAGGATGACGATGCATTGGAACAAGCCATGGGTGGAGAGTGGTACCTCCTCCCCACAAGTTCTGGAGACTCGCAACCCATTCGATTAATCAGGGATGAAAAAAAGTCACTCTCCATTGGAAGCCGGTCAGATCCCAGCAATTCTACTGCTTCCCTGGCATTGGCCTTGCCACAGATATCAGAAAACCATGCTACTATCACATGCAAGAATAAGGCCTTTTATGTGACTGATAATGGAAGTGAACATGGTACATGGATTACCGACAACGAAGGTAGACGCTATCGCGTACCTCCGAACTTCCCTGTCCGTTTCCATCCCTCGGATGCCATTGAGTTTGGTTCAGATAAAAAGGCCGTGTTCCGTGTGAAGGTGCTGAGCACGCTCCCATATGAATCTGCAAGAGGAGGGCCGCAAATCCTGCAGGCAGCATGA</cdnaseq>

Protein Sequence

<aaseq>MAPLPSSSSTRATSLVAIPGASCPHGQAQRLLAFRPPRRGSQWRGLCVSRGRHGATVAMAMPAAQAAGRRARVLVAGGGIGGLVFALAAKRKGFEVVVLERDMSAVRGEGKYRGPIQLQSNALAVLEAVDAGAADQVMDAGCITGNRVNGIVDGVSGSWYIKFDTFTPAAERGLPVTRVISRMTLQQILARAVGDDAILNDSHVVDFIDDGNKVTAILEDGRKFEGDLLVGADGIWSKVRKVLFGQSEATYSEYTCYTGIADFVPPDIDTVGYRVFLGHKQYFVSSDVGAGKMQWYAFHKEPAGGTDPENGKKKRLLEIFNGWCDNVVDLINATDEEAILRRDIYDRPPTFNWGKGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKSWQESAKSGTPMDIVSSLRRYEKERILRVSVIHGLAEWQQSWLPLIDHTWFLTKLRIPHPGRVGGRFFIKYGMPLMLSWVLGGNSTKLEGRPLSCRLSDKANDQLRRWFEDDDALEQAMGGEWYLLPTSSGDSQPIRLIRDEKKSLSIGSRSDPSNSTASLALALPQISENHATITCKNKAFYVTDNGSEHGTWITDNEGRRYRVPPNFPVRFHPSDAIEFGSDKKAVFRVKVLSTLPYESARGGPQILQAA</aaseq>

Gene Sequence

<dnaseqindica>1..476#913..1075#1182..1256#1341..1441#1527..1642#1732..1943#2072..2163#2359..2449#2693..2796#2920..2965#3046..3110#3231..3311#3395..3449#3643..3731#3822..3909#4031..4111#ATGGCGCCACTCCCAAGCTCCAGCTCAACGCGGGCCACCTCTCTCGTGGCGATCCCGGGCGCCTCCTGCCCCCATGGCCAGGCGCAACGCCTGCTCGCCTTCCGTCCCCCACGACGCGGGTCACAGTGGCGCGGGCTTTGCGTGTCCCGGGGGCGCCACGGGGCGACCGTCGCCATGGCAATGCCGGCGGCGCAGGCGGCGGGGCGCAGGGCGCGCGTCCTGGTGGCCGGCGGCGGCATCGGCGGCCTGGTCTTCGCGCTCGCGGCCAAGCGGAAGGGGTTCGAGGTGGTGGTGCTGGAGAGGGACATGAGCGCCGTGCGCGGGGAAGGGAAGTACCGGGGCCCGATCCAGCTGCAGAGCAACGCGCTCGCGGTGCTCGAGGCCGTGGACGCCGGCGCCGCCGACCAGGTCATGGACGCCGGCTGCATCACCGGCAACCGCGTCAACGGCATCGTCGACGGCGTCTCCGGCTCCTGGTAAGGAGTCAAGTCGTGCCAGCGTTAGAAGCGAATTGCAACACCCACCAAGGATTGGTTGCGTCTATCAAGCCTAAAATTATGGGGTTTTTTTTTCTCCTTTCTAGAAGTACTAAGTGTAAGAATAATTTGCTGGTTTACACTATTGGCCGTCCTGTTTGTACAAGTTTTGCTTACCTATTGCTACAACCTACATGAGAATCATTAATCACAGACCTATAGTTTCAATTACAGTACAATACTGTACAAGGAAATGCAATTTGTTGCTTAATCATTAGTGCTAACTTGACATATAAGGCAATTATTCTTTGTGCTTACTCTGCTACATTTGTTTGCATTTGCAATTCTGAATGTTGTTGTCTGCTTGTTGGTTAGCTTTAAGATGGGAACTCAACTGCTGAAGGCATCCATTTGACTGTGTCAAATTGGTATTCAGGTACATCAAGTTTGATACATTTACTCCTGCAGCTGAGCGAGGTCTCCCAGTTACAAGGGTTATTAGCCGAATGACGCTGCAGCAGATTCTTGCTCGTGCGGTTGGTGATGATGCTATACTGAACGATAGCCATGTTGTTGATTTCATAGATGATGGCAACAAGGTGAATGATCAGTTTGTCATTGTGGTCAATTGGCCATATCCTCAGTATAAAATGTGCTCAAAATGTTATGGAAAATTCTTATGTTATGGCTTTTGGACAAGTACAGGTAACTGCAATTTTGGAGGATGGCCGGAAATTTGAAGGTGACCTTTTGGTTGGTGCTGATGGAATATGGTCAAAGGTAATGTAATCACTCAAATCTTTTGGTGACAATTGACAAACATAATCAACAGAGACGTGATTTGAGAATTTAATTATTGGACAGGTGAGGAAGGTGCTTTTCGGGCAATCAGAAGCAACTTATTCAGAATATACTTGCTACACTGGCATTGCAGACTTTGTGCCTCCTGACATTGACACAGTTGGGTATGTAGTGCGGATTCAGATGACTGCTGTATTTTTTTCCTCTGTTAGGAAATACTAATATGTTCCTCATTTTCTTCTGTTGAAGGTACCGTGTATTTCTTGGTCACAAACAATATTTCGTCTCCTCAGATGTCGGTGCTGGAAAAATGCAGTGGTATGCATTTCATAAGGAACCTGCTGGTGGCACTGATCCTGAAAATGGTGAGTTCCTAGAGTGAAACTTTTGAGCTCACAAGCATATGCGGGCCCTGTCTGTGTTCTTATTGTCCACTAATGCTTTTTATTGGCAGGTAAAAAGAAAAGATTGCTCGAGATATTTAATGGTTGGTGCGATAACGTCGTTGATCTGATAAATGCAACTGATGAGGAAGCAATTCTTCGCCGGGATATATATGACCGACCACCTACTTTTAACTGGGGAAAAGGTCGTGTCACTTTGCTAGGTGACTCTGTACATGCTATGCAGCCAAATCTGGGTCAAGGTGGCTGCATGGCTATTGAGGTACACAATTAACTTTTCATGTCTCTGATGACACTACCAGCATGGTGGATGCATTTCTTGCCCTGGTATTGAAACTCAGCATATATACTTATGTTACTGTGACAATTTTTTCCCACTTGATTTCACAGGATGGTTACCAGCTGGCTGTAGAACTTGAGAAGTCCTGGCAGGAGAGTGCGAAGTCTGGAACTCCTATGGATATAGTTTCCTCCTTGAGGAGGTAACTGTTTTTTATGTTTTATCATACTAGTTTTACCTAGATAGAATGTCTTCTGGCATCGACTAGACTTTATGTCAATACGGATCAAAATTATTCTTCAAGGCCATCTTATTGTGTATACTCTTAATTCTTTAGGTGTGATCCTCAGTCATTTGATTGATGATCAAGACATTATTGTGCTTGTTGTGGCTGCAGATATGAGAAGGAGAGAATACTACGTGTTTCTGTTATACATGGGTTGGCAGAATGGCAGCAATCATGGCTACCACTTATAGACCATACTTGGGTGTGGGTCTGGGACCATTGTCGGTATGTCAAGAACTTGTTCTGCTTTGTACTTCTATTATCTAAATGTACTTATGTGGTTTATGCCCGTCAGCCAGTTTTAACCTGCTTATTATGTCTGTTGCTGATTATTTTATTTTATTTCTGAAACAAGTTTCTGATTTAGATTATCATCATAAGAAAATCATTGAAGAATCGCAGACTAAAATTATTTGGTCTTAATATGGATATCTGTCGAATGCAGTTTTTAACGAAGTTGAGGATACCACATCCTGGAAGAGTTGGTGGGAGATTCTTCATCAAGTATGGAATGCCTTTGATGTTGAGCTGGGTTCTAGGAGGAAACAGGTGATTATTGAGCTATAACTTCGATTTTATTTTGAGCTCACATGTAGATACATAATCTGAAAATACTCACTAGATCGGCATGGTTGTTATTACTCACCATATGTTAATGTCACCAATGTACAGCACGAAGTTAGAAGGAAGACCGTTAAGCTGTAGGCTTTCTGACAAGGTATATCTCTATTCTGTATGATTTATCAATGTGGGGCAGTGCAATATTTTCCTTTTCTGACTTTTACAATCATGCTGAAGGCAAATGACCAGCTTCGTCGATGGTTTGAGGATGACGATGCATTGGAACAAGCCATGGGTGGAGAGTACGGTCTTACTTGTCTTCAGAATTTTGATTTCATTTTATGTCAAATATGCTCTGTATAATCCTTCTTAATTCCAGTGCCTTTGAGAAAAGGTACTCATTAGAACAATGCTACTTGCAGGTGGTACCTCCTCCCCACAAGTTCTGGAGACTCGCAACCCATTCGATTAATCAGGGATGAAAAAAAGTCACTCTCCATTGGGTAGGTCTAAATAATAAATCTGTTATTTTTTGGTAACACTTTCTTCAAGGATTGTAGAATAAAACAAAATTGTTCTTTTGCAGAAGCCGGTCAGATCCCAGCAATTCTACTGCTTCCCTGGCATTGGCCTTGCCACAGGTTAGATAAGCAAAATGATGGCATCAAATATTTGTTGGAACTTCTTTCGGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAACTAATGCTTCTCCAATTTGTTCAACTTCCTTGCAGATATCAGAAAACCATGCTACTATCACATGCAAGAATAAGGCCTTTTATGTGACTGATAATGGAAGTGAACATGGTACATGGATTACCGAGTAAGTTCTGAAAACCGCATGATTCTTTGCTCTTGCCCTGAATTCGAAATGGATGCATCTTACTAATTCAGTCCCATGTGGACTCTCCAGCAACGAAGGTAGACGCTATCGCGTACCTCCGAACTTCCCTGTCCGTTTCCATCCCTCGGATGCCATTGAGTTTGGTTCAGATAAAAAGGTACCCAAACCTTACTGACACCGTATTGTACCATTGTCTCCTCTCATTTTGTTCAGAAGAACCATTTGCGTTGAGTTGCTGCAAAAATTCTGAGTTCTGATCAATTTCTACGAACTTGCAGGCCGTGTTCCGTGTGAAGGTGCTGAGCACGCTCCCATATGAATCTGCAAGAGGAGGGCCGCAAATCCTGCAGGCAGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016502

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA016502&oldid=65396"