BGIOSGA016505

From RiceWiki
Revision as of 04:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016505| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016505, complete gene.| tag = H0818E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016505

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016505, complete gene.

LocusTag

H0818E04.14

Ensembl Transcript ID

BGIOSGA016505-TA

Ensembl Protein ID

BGIOSGA016505-PA

Length

4258

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20625988..20630245

Sequence Coding Region

20625988..20626374,20627289..20627742,20628379..20628434,20628518..20628648,20628737..20628833
,20630090..20630245

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20625988..20630245 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20625988..20630245 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGATGGCGGCGACCACCACCACCACCGACTCCTCCCAGGCGGCCGTGCCGCCTCACCACCCTCACCCTCACGCCCACCCGCACCCGCACGCGCACCCGCACCCGCACCACCCCATGGCGCAGGCGCGGTGGGTCGTCCTGCCTTACCCGCCTCCGCCGCCGCCCATGGTGGCCGCTCCGCCGCCCCCGCCGCCGCAGTACGCCAAGCACTTCGCGGCGGGGCCGCCCCCCGCCGCGGCGGCCGGGCGGCGCACGCCGACCCCGCCCGCCCCCGCCGGATCCGGCGGGAACGGGTGCGAGGAGAACAAGACGATCTGGGTTGGCGACCTCCAGTATTGGATGGACGAGAACTACCTCCACAGCTGTTTCGGACCCAGCGGCGAGGTAGTGACGATAAAAGTTATCCGCAATAGACAAACTGGACAATCCGAGGGATATGGTTTTGTAGAGTTCTACTCTCACGGATCGGCAGAGAAGGCTCTTCAGAATTTTACTGGTCATGTGATGCCTAACACTGATCGACCTTTCAAGTTAAACTGGGCTTCATATAGCATGGGTGAAAAGCGATCTGAAGTTGCTTCTGACTACTCAATTTTCGTTGGTGATCTAGCTGCTGATGTTACTGATGAAATGTTGATGGAGCTTTTTGCTAATAAGTACCGCTCTGTGAAAGGAGCTAAAGTTATTATTGATGCAAACACAGGCCGTTCTAGGGGCTATGGGTTTGTTAGATTTGGAGATGACAATGACAAATCCCATGCAATGACTGAAATGAATGGTGCGTATTGCTCTACTAGGCCAATTCGTATTGGACCTGCAACTCCCAGAAGGTCTTCAGGTGATTCTGGCTCCTCAACACCTGGGCATTCAGATGGCGATTCTACTAACAGAACGGTATATGTTGGTGGGCTCGATCCAAATGTCAGCGAAGATGAGCTGAGGAAGGCATTTGCCAAATATGGTGATGTTGCCTCTGTAAAAATTCCTCTAGGGAAGCAATGTGGCTTTGTTCAATTCGTCAGCAGAACTGATGCGGAAGAAGCACTGCAAGGATTGAATGGATCAGTCATTGGAAAGCAGGCAGTTCGCCTTTCATGGGGCCGCAGCCCATCACATAAACAGTCTAGGGCTGATTCTGGCAGCCGAAGAAACAATATGTACTATGGGACGCCATTCTACGGTGGATACGGTTATGCCTCCCCCGTCCCGCACCCTAACATGTATGCTGCTGCATATGGAGCCTACCCTGTCTATGGCAGTCAGCAGCTAGTGAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MQMAATTTTTDSSQAAVPPHHPHPHAHPHPHAHPHPHHPMAQARWVVLPYPPPPPPMVAAPPPPPPQYAKHFAAGPPPAAAAGRRTPTPPAPAGSGGNGCEENKTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQNFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSRADSGSRRNNMYYGTPFYGGYGYASPVPHPNMYAAAYGAYPVYGSQQLVS</aaseq>

Gene Sequence

<dnaseqindica>1..387#1302..1755#2392..2447#2531..2661#2750..2846#4103..4258#ATGCAGATGGCGGCGACCACCACCACCACCGACTCCTCCCAGGCGGCCGTGCCGCCTCACCACCCTCACCCTCACGCCCACCCGCACCCGCACGCGCACCCGCACCCGCACCACCCCATGGCGCAGGCGCGGTGGGTCGTCCTGCCTTACCCGCCTCCGCCGCCGCCCATGGTGGCCGCTCCGCCGCCCCCGCCGCCGCAGTACGCCAAGCACTTCGCGGCGGGGCCGCCCCCCGCCGCGGCGGCCGGGCGGCGCACGCCGACCCCGCCCGCCCCCGCCGGATCCGGCGGGAACGGGTGCGAGGAGAACAAGACGATCTGGGTTGGCGACCTCCAGTATTGGATGGACGAGAACTACCTCCACAGCTGTTTCGGACCCAGCGGCGAGGTTTGCCTTCACTCCCCGATCCGGGCTTTCCGTACTAGATCTCACTGATACGATTAGATTCGTGCCATTTCCATGGGTTAGTTCGCCTGTTAGTGTTCTCAAATTGTCGCAAAAGCATACTTTTGCGTTTATTTGTCGCTCTACGCGAATAAAGGTACAAAATATTTGTAGAATTAGCTTTGAGGTTTGCTCGAGGCACCTACTTCGAGGCCATTCAATGCAATATGACGTAATGCTTTTGTTGGTCTAGTGATTTATGTCTATTGATTCGTTTTGTTACTGCCGAGTAACTTGAAAGCATGTTCCTTTATTTGGTTGAGTTGTTATTTTATATGAAACTGGAAATGGGGCACCCTTTCTGTAGAATTGGTACTTTCGAGCTGCCAAAGGTGCCGACTTTGTGCTGGGATTTATGTACATGTCCAATTTGATGAGTAGTTTGGAGGAACTGGTCTTGACGTGTGATGATTTAGTAAACATTTTGAATAAGTCAAGCTAGCTGTTGTACTTTGGTGGTTACATAATTAGTAATGAACAGTTAGAGGAGGGAAAGGAAGCCATAATGACAGCATTAGCTATTTTGCTGTATTTTTTGGGACTGTGTCCATCGATGTTGACAGGAAGAAAAATGATGCCTGTTAAGAGGATTATTGTGATGGAAACTGATGCGGTCAGGGACAGGGTTAATGAACAAAGACACAAAATGGACTGTAATTCTTGTTTCTGTACTTGTTGCAGGGAACTGTTTATTCTGTATTTGAAATACCAACATCTGTGGTTGTTAGGTTTATTCAATTACAGAACTAAGGATTACCACTGATCAGTTCGTCAACTTCTTATTTACGATGCTTGTGTGTATCTGTGCTATTCCTTGACTGCTAACTTCCTTGCCTTTCGACACCCCTTTTTTATAGGTAGTGACGATAAAAGTTATCCGCAATAGACAAACTGGACAATCCGAGGGATATGGTTTTGTAGAGTTCTACTCTCACGGATCGGCAGAGAAGGCTCTTCAGAATTTTACTGGTCATGTGATGCCTAACACTGATCGACCTTTCAAGTTAAACTGGGCTTCATATAGCATGGGTGAAAAGCGATCTGAAGTTGCTTCTGACTACTCAATTTTCGTTGGTGATCTAGCTGCTGATGTTACTGATGAAATGTTGATGGAGCTTTTTGCTAATAAGTACCGCTCTGTGAAAGGAGCTAAAGTTATTATTGATGCAAACACAGGCCGTTCTAGGGGCTATGGGTTTGTTAGATTTGGAGATGACAATGACAAATCCCATGCAATGACTGAAATGAATGGTGCGTATTGCTCTACTAGGCCAATTCGTATTGGACCTGCAACTCCCAGAAGGTCTTCAGGTATGTCTCCTATTTCCTGATTTTTTTAGCACTTTGATATTGCAACTCCTATTTTGTCCATGGACCGTCTGATGTTTTATGTTATTAGTAGTTTGGCTTGTACTCAATTTGAGCTATTTTTTTTCAGATTATTAAGTATCACTATAAATTTTGGAAGGTCTGAATTGTTTTTTCACCTTGTACCCTCCTAATGTTGCTTAATTATACATCTATTACCCCCAACTATTTTTTTGGAACACATAGTGAAGTTCTAATAAATAACGAATTTGTCCTGTTATTTATCTGGACCCATGCCTTGAAGACCACTTGCAAGTTGCAAGATGAGAAATTAAAGAATTGTACCTGCCAAGCAAGATCTGCTTCATGGGGATCCCATCTCGTGGCTAGTGTTTCTAATATTTGGTGGTTTCAGCTTCTCTAACTGCCCCTTGAATTACTTACTATAGGTTCCTATCTTCATAATCATTGCTTCACAGCACTAGATTGAATAAAGTTTAGTTAATGTTCCCAGAGCATATTATGTATGACGTACTTATGTATCTTGCTTTTGTGTAGGGTGCTATACATTTGTTTTAGTGTTGTATGGAATCAGTTTGGTTTAATCATTTGTTTACCCAGCTTCACTATTATCTTCAGGTGATTCTGGCTCCTCAACACCTGGGCATTCAGATGGCGATTCTACTAACAGAACGGTGTGTGGTACTACTGGTTTTCCACGGTGTTTGTCACCCTGTTGCCTGATAATTTCTAATATGTAGTTGTTGATCTCCTTTAGGTATATGTTGGTGGGCTCGATCCAAATGTCAGCGAAGATGAGCTGAGGAAGGCATTTGCCAAATATGGTGATGTTGCCTCTGTAAAAATTCCTCTAGGGAAGCAATGTGGCTTTGTTCAATTCGTCAGCAGGTATGTATCTGAGGCTGTTCTTATTTGGCTACTTAGTTTTATATGACATGCTGGAGATGGTATTTAAGTCTTGCAACTATGTCTTTAGAACTGATGCGGAAGAAGCACTGCAAGGATTGAATGGATCAGTCATTGGAAAGCAGGCAGTTCGCCTTTCATGGGGCCGCAGCCCATCACATAAACAGGTTCGTCCATGCTTCACATCGCTATTTTCTGTTTTATATTATCTTTGCTATTGGATCAGTAAACCAGTTGCAGTGTGGCACAAATGTTGTATTTGAAATTTTCAGTCCAAGTAAACAACTGGCCTGGGCAAGATAATTTGTCATGTGATTTGATCTTTCCTGTGAAAAAGCTATTTTGTAGTGTGATCTAGTTGCTTTATGACTAAACGAGAGCTTGCTTACCCATGTCATATGGTGTGCATTCCTGCTTCAATACTTCTTCGTCAACCGTCTAGATCTAGTTGCTTTATGACTAACTGAGTGTTGGCTTACTCATTTGGGACGTGACGCACTCCTGCTTCAGTGCTTCCTCATTGTCCAGTATCCTAGTATTATTTAGACAAGACTCCAACCTTAAAGTCTGCTAGCTATTTCTAGTGTGCAATCAAATAACTTTCATTGTGCACCTTTGTCTGGGCCATGCCTCATTTATTCAAGTTTACTCCAGACACCAGGCCTGGCTGAGGCCCAACTGTACCTATTGTGTGGGAGAGCTACCTATTTCTAGTGTGCTTAGGTCTACTAGCTATTTCTAGCGTGCAATCAAATAACTTTCATTGTGGACCTTTATCTGGCCCATGCCTCATTTATTCAAGTTTACTCCAGACACCAGGCCTGGCTTAGGCCCAACTGTACCTATTGTGTGGGAGAGCTACCTATTTCTGGTGTGCTTAGGTCTGCTAGCTATTTCTAGTGTGCAATCAAATAATAACTTTCATTGTACACCTTTATCTGGCCCATGCCTCATTTATTCAAGTTTACTCCAGACACCAAGCCTGGCTTAGGCCCAACTGTACCTATTGTGTGGGAGAGTTACCAATTAATCAATGCTTAATACACCCCCATAGCCCAGCTGCAGTACATCATTTTGGACCAGTGCTTAGTCTCAACACGTTAGTTATATGATTTTATAGCTAGCTAAAAGTTCATGGCCTGAGAGGCCTTTAGTATTTTAGCGATGCTATTTCTGGGGCTTTTGGGAGTGTCCAGAATATAGTGAACTCTGAATGATTCAGGCTTTAAACTAGGTCACCATGAGTTCTTTTTTCTGCACAAAATCTAACAATTTCATGCAATTGTCGATAACATCAGTATAAATGTTCGTCATATGTAATGCCAAATTATGTTCCCCCGCTATGGAAGTGGACAGAACTATGTTTTTTGTTGAATTTAGTCATTCTCCCATCCATATCACTCATTTGCTGTTCTATTTCCAGTCTAGGGCTGATTCTGGCAGCCGAAGAAACAATATGTACTATGGGACGCCATTCTACGGTGGATACGGTTATGCCTCCCCCGTCCCGCACCCTAACATGTATGCTGCTGCATATGGAGCCTACCCTGTCTATGGCAGTCAGCAGCTAGTGAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016505