Os08g0109800

From RiceWiki
Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0109800| Description = Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein| Version = NM_0010...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0109800

Description

Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein

Version

NM_001067348.1 GI:115474432 GeneID:4344473

Length

3091 bp

Definition

Oryza sativa Japonica Group Os08g0109800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:495929..499019

Sequence Coding Region

496002..498512

Expression

GEO Profiles:Os08g0109800

Genome Context

<gbrowseImage1> name=NC_008401:495929..499019 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:495929..499019 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaatgtctcgccatggcgcccttgctctgaccacctccttcctcctcgcggccgtcgccgtcttccttcccgggcacgcggcggcgcggcagttctccaccgtcgccatctccaactcccccgacgcgacggtcgtgtgcgcgctcgtccgccccaaggacgtgcccgatgatgtccccggcgccaagctgcggtgcacctccatgcccaccggcgaggtcatgtcctacccctccgcggacgtcccctacaacgccatcgccgccggcaccgacttcctgtgcggcctcatggcgcccaacggcggccacgccgccatgcgctggtggtccttctccgacgaggccgccgccaaccgctcccgccccgtcggccgccgcctctactggggcccttccctccgcgccctctccgccggtggccctcacgtctgcggcctctccgacgcccacgacccgacgtgctgggagtggccggggttgagcttgcccaagggcctcgacttctcccgcatcgccctcggccgcgacttcctctgcggcgtcgtcaagggcaacgcctccgccatgacctgcttcggcggcggcatggcgccgcccgcgttcgccggggctgcttccatcgtggcggtcgccgccggccaccgccacgcctgcgccgtcgacgacgacggcggcatgtcgtgctggggcgaagggtacccggacatgcgccccggcgacctccccgccgacatgaagtccatggcgctggggcggaacacgacgtgcatcctcgacggcgacgacatggtgcggtgctggggcgtggaggtgcccgaggagtacaggcgcgcgtcgttcgtgtccatcgaggccgacggcgacaccgtctgcggcgtcctcaccaccaacttctccgtcgtgtgctggggcaacgagaggttccatgggaggcacctcatcttcaacgacaccatgcccggcgcgtgcgccaccgtcggcaactgctcctccagctgcggcttcgtccccggctccgccgcgctctgcggcaacggcggcggcgagggcggcgagcagctcgtcgtgtgccagccctgcaagctgccgctcaacgcgtccaggctcgtcgtcgggaatgggaccagcaagaatgcggcggcgccgactgattccgggaagaacaggaaggccgtcaaggtcgcggtcaccgcggcctgcgtcggcgtcgcggcgctcgtggtggctgggctggtgttgtacctcgccgtcgtgaggaagcgtggcgggaagaagaacgccaccgtgcagctcggcgagtcgtcgacgctgaccctctgccgcgacttggagggggccgtgatcatgccggcgccggaggcatcgccgccgccgccgccgctcgggtgcgaagagttcacggtgaaggagctctcgcggctgacgaacgggttcgccgaggagaggaagatcgggagcggcagcttcgggtcggtgtatcgcgcgaagctccccgacgggcgcgaggtcgccatcaagcgcgcggagcgtccgcgcgcggcgtcgggcggcgggcgtcgccggcgccgccggtacgacgcggagcgcgcgttccgggcggagctccggctgctgtcccgcgtgaaccaccgcaacctggtgcagctgctgggcttctgcgaggagcgcggcgagcgcatcctggtgttcgagttcatgccgcacggcgcgctgcacgaccacctccacggccgcgtcgacggccactccccgctgttcgcgtcgtgggaggcgcggctccgggtggcgctcgacgcggcgcgcggcgtcgagtacctgcattgctacgccgtgccgccgatcatccaccgcgacatcaagccgtccaacatcctcctcgacggcgagtggaccgccaaggtgtcggacttcgggctgtcgctggcatcatcatcgtcgtcgtcggcgaccgcgacaccaccggcggcgtgctcgacgtcgtcgacggcggggacggtggggtacatcgacccggagtactaccggctgcaggagctgacgcagcggagcgacgtgtacagcttcggcgtggtgctcctcgagctggtgaccgggaggaaggcgatccaccggcaggagggcgggagcgggtcgccgcggaacgtgatcgagttcgccgtgccggcggtggaggcgggcggcgtcgggaggatcatggacgggcgcgtgccggcgccgcgcgggaacgaggcggaggcggtgtcgcgcgtggcgaggatcgcgagcgagtgcgtgcggccgcgggggcgcgcgcggccggtgatgtcggaggtggtcgccgagctggagtgggcggtcacgctctgcgaggagtccgtagaccggagctccgccgccgcccagcagcagaacagctcgcggcacggcggctccgacgtgtcgcggtcggagtccgacgaccccagccccttccacacgagggagttcgccggcgtcggacatggcaggtcaaactcagcaatgtaa</cdnaseq>

Protein Sequence

<aaseq>MPMSRHGALALTTSFLLAAVAVFLPGHAAARQFSTVAISNSPDA TVVCALVRPKDVPDDVPGAKLRCTSMPTGEVMSYPSADVPYNAIAAGTDFLCGLMAPN GGHAAMRWWSFSDEAAANRSRPVGRRLYWGPSLRALSAGGPHVCGLSDAHDPTCWEWP GLSLPKGLDFSRIALGRDFLCGVVKGNASAMTCFGGGMAPPAFAGAASIVAVAAGHRH ACAVDDDGGMSCWGEGYPDMRPGDLPADMKSMALGRNTTCILDGDDMVRCWGVEVPEE YRRASFVSIEADGDTVCGVLTTNFSVVCWGNERFHGRHLIFNDTMPGACATVGNCSSS CGFVPGSAALCGNGGGEGGEQLVVCQPCKLPLNASRLVVGNGTSKNAAAPTDSGKNRK AVKVAVTAACVGVAALVVAGLVLYLAVVRKRGGKKNATVQLGESSTLTLCRDLEGAVI MPAPEASPPPPPLGCEEFTVKELSRLTNGFAEERKIGSGSFGSVYRAKLPDGREVAIK RAERPRAASGGGRRRRRRYDAERAFRAELRLLSRVNHRNLVQLLGFCEERGERILVFE FMPHGALHDHLHGRVDGHSPLFASWEARLRVALDAARGVEYLHCYAVPPIIHRDIKPS NILLDGEWTAKVSDFGLSLASSSSSSATATPPAACSTSSTAGTVGYIDPEYYRLQELT QRSDVYSFGVVLLELVTGRKAIHRQEGGSGSPRNVIEFAVPAVEAGGVGRIMDGRVPA PRGNEAEAVSRVARIASECVRPRGRARPVMSEVVAELEWAVTLCEESVDRSSAAAQQQ NSSRHGGSDVSRSESDDPSPFHTREFAGVGHGRSNSAM</aaseq>

Gene Sequence

<dnaseqindica>74..2584#tttcttccatttccaaagccaagaaagaaagggaggagtaagtctcccccatgtcgtcttctcctcgctcccaatgccaatgtctcgccatggcgcccttgctctgaccacctccttcctcctcgcggccgtcgccgtcttccttcccgggcacgcggcggcgcggcagttctccaccgtcgccatctccaactcccccgacgcgacggtcgtgtgcgcgctcgtccgccccaaggacgtgcccgatgatgtccccggcgccaagctgcggtgcacctccatgcccaccggcgaggtcatgtcctacccctccgcggacgtcccctacaacgccatcgccgccggcaccgacttcctgtgcggcctcatggcgcccaacggcggccacgccgccatgcgctggtggtccttctccgacgaggccgccgccaaccgctcccgccccgtcggccgccgcctctactggggcccttccctccgcgccctctccgccggtggccctcacgtctgcggcctctccgacgcccacgacccgacgtgctgggagtggccggggttgagcttgcccaagggcctcgacttctcccgcatcgccctcggccgcgacttcctctgcggcgtcgtcaagggcaacgcctccgccatgacctgcttcggcggcggcatggcgccgcccgcgttcgccggggctgcttccatcgtggcggtcgccgccggccaccgccacgcctgcgccgtcgacgacgacggcggcatgtcgtgctggggcgaagggtacccggacatgcgccccggcgacctccccgccgacatgaagtccatggcgctggggcggaacacgacgtgcatcctcgacggcgacgacatggtgcggtgctggggcgtggaggtgcccgaggagtacaggcgcgcgtcgttcgtgtccatcgaggccgacggcgacaccgtctgcggcgtcctcaccaccaacttctccgtcgtgtgctggggcaacgagaggttccatgggaggcacctcatcttcaacgacaccatgcccggcgcgtgcgccaccgtcggcaactgctcctccagctgcggcttcgtccccggctccgccgcgctctgcggcaacggcggcggcgagggcggcgagcagctcgtcgtgtgccagccctgcaagctgccgctcaacgcgtccaggctcgtcgtcgggaatgggaccagcaagaatgcggcggcgccgactgattccgggaagaacaggaaggccgtcaaggtcgcggtcaccgcggcctgcgtcggcgtcgcggcgctcgtggtggctgggctggtgttgtacctcgccgtcgtgaggaagcgtggcgggaagaagaacgccaccgtgcagctcggcgagtcgtcgacgctgaccctctgccgcgacttggagggggccgtgatcatgccggcgccggaggcatcgccgccgccgccgccgctcgggtgcgaagagttcacggtgaaggagctctcgcggctgacgaacgggttcgccgaggagaggaagatcgggagcggcagcttcgggtcggtgtatcgcgcgaagctccccgacgggcgcgaggtcgccatcaagcgcgcggagcgtccgcgcgcggcgtcgggcggcgggcgtcgccggcgccgccggtacgacgcggagcgcgcgttccgggcggagctccggctgctgtcccgcgtgaaccaccgcaacctggtgcagctgctgggcttctgcgaggagcgcggcgagcgcatcctggtgttcgagttcatgccgcacggcgcgctgcacgaccacctccacggccgcgtcgacggccactccccgctgttcgcgtcgtgggaggcgcggctccgggtggcgctcgacgcggcgcgcggcgtcgagtacctgcattgctacgccgtgccgccgatcatccaccgcgacatcaagccgtccaacatcctcctcgacggcgagtggaccgccaaggtgtcggacttcgggctgtcgctggcatcatcatcgtcgtcgtcggcgaccgcgacaccaccggcggcgtgctcgacgtcgtcgacggcggggacggtggggtacatcgacccggagtactaccggctgcaggagctgacgcagcggagcgacgtgtacagcttcggcgtggtgctcctcgagctggtgaccgggaggaaggcgatccaccggcaggagggcgggagcgggtcgccgcggaacgtgatcgagttcgccgtgccggcggtggaggcgggcggcgtcgggaggatcatggacgggcgcgtgccggcgccgcgcgggaacgaggcggaggcggtgtcgcgcgtggcgaggatcgcgagcgagtgcgtgcggccgcgggggcgcgcgcggccggtgatgtcggaggtggtcgccgagctggagtgggcggtcacgctctgcgaggagtccgtagaccggagctccgccgccgcccagcagcagaacagctcgcggcacggcggctccgacgtgtcgcggtcggagtccgacgaccccagccccttccacacgagggagttcgccggcgtcggacatggcaggtcaaactcagcaatgtaaaaaaaaaaaacaaacgagttttatttttttatcctttttttatttattttctttgttttgttttaattagtttccacggttgctggaataggatgaattagttgctgtgcataaacatttttcaaagaggaaaaaaaagatactgagagggagtattcattttgatgttgattgttacttgaattagtctaggagagtttttgattgcttttgctctgtgaacaaaattcataagagtttgacaaaatctaacatgtacgttgtatatcaagatttattgacacaacataataatataataataatactagttggagtagtgggtggtttgtaagtacaatcttgttttttcttctgttttgatttgttagcttagaaattttcggagggttggtaggttagattagacaaaattattaatttgtggccttgtgagagtgtggagatgcaacaactgtacttcttccaacaaactgcttttattatataatgtaatacttggagtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0109800, RefSeq:Os08g0109800