BGIOSGA016508

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Revision as of 04:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016508| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016508, complete gene.| tag = H0818E0...")
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Gene Name

BGIOSGA016508

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016508, complete gene.

LocusTag

H0818E04.17

Ensembl Transcript ID

BGIOSGA016508-TA

Ensembl Protein ID

BGIOSGA016508-PA

Length

2439

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20651939..20654377

Sequence Coding Region

20651939..20652325,20653472..20654377

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20651939..20654377 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20651939..20654377 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGTTTTCCTCCGCGCCGCCGCTCGTGCCACGAGGTCCTCCGCGCTCGTCCGCGCCATCCTCGCGAGCCGGAGCCCCCTCTCGTCGTCCTCCTGTGCCGCCTCCCCTACGACCGCGGCGCCCGTCCCCGGCACCGCGCCGCGCGCCGCCGCGGCTGGCGATGGCGACGAGGGATGCGCGGCGGCCGCGGCCACGCCCGCGGACGTGGGAGGGGACGAGGACGACCTGAGAAGCCGCGTCTTCCGGCTGCGCCTGGCGAAGCGGAGCGCGACCGCGGCGCTCGAGAGGTGGGCCGGGGAAGGCCGCGCCGCGTCGGCGGCGGAGCTCCGCGGCATCGCCCGCGACCTCAGCCGCGCAGGCCGGTACAAGCACGCGCTCGAGGTAGCAGAGTGGATGAAGACACATCATGAGTCCGATTTATCTGAGAATGACTACGGAATGCGCATTGACTTGATTACCAGAGTTTTTGGTGCTAATGCAGCTGAAGATTTTTTTGAGAAACTTCCAGCTTGTGTGCAATCACTGGAAGCATATACAGCTCTCCTACATTCTTATGCTCGATCCAAGATGACAGACAAAGCTGAGAGGCTGTTTAAAAGAATGAAGGATGCCAACCTTTCCATGAATATCCTTGTTTACAATGAAATGATGACCCTGTACATTTCTGTTGGTGAGCTTGATAAAGTTCCGGTCATTGCTGAAGAGCTGAAAAGGCAAAAATTTTCCCCAGACCTCTTCACATACAATCTCCGGATCAGCGCTTCTGCGGCATCAATGGATCTGGAGGGCTTCAAAGGAATCCTTGATGAGATGTCAAAAGATCCAAACTCCAATGAAGGGTGGAAGCTGTACCAGAACCTCGCTGTGATTTACGTCGACGCTGGTCAGCTTGTTGGTTCAGGAAACTCGCTGGTGGAAGCAGAGGCGAAGATCAGCCAGAGGGAGTGGATCACATACGATTTCCTCGTAATCTTACACACCGGGCTCGGCAACCGGGATAGAATCAAGGACATTTGGAAATCCATGCTGATGACTTCACAGAGGATGACGAGTCGGAACTACATCTGCGTGCTCTCATCCTACCTGATGTGCGGGCAGCTGAAGGATGCCGGGGAAGTCATCGACCAGTGGCAGCGGTCGAAAGCCCCAGAGTTCGACATCTCTGCCTGCAATAGGCTGTTTGATGCCTTCCTGAACGCCGGTTTCACCGACACGGCAAATAGCTTCAGGGAACTGATGCTGCAAAAGAGCTGTATACTGACAAGCAGGCAAGAACGCTCTTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAVFLRAAARATRSSALVRAILASRSPLSSSSCAASPTTAAPVPGTAPRAAAAGDGDEGCAAAAATPADVGGDEDDLRSRVFRLRLAKRSATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGILDEMSKDPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISQREWITYDFLVILHTGLGNRDRIKDIWKSMLMTSQRMTSRNYICVLSSYLMCGQLKDAGEVIDQWQRSKAPEFDISACNRLFDAFLNAGFTDTANSFRELMLQKSCILTSRQERSS</aaseq>

Gene Sequence

<dnaseqindica>1..387#1534..2439#ATGGCGGCGGTTTTCCTCCGCGCCGCCGCTCGTGCCACGAGGTCCTCCGCGCTCGTCCGCGCCATCCTCGCGAGCCGGAGCCCCCTCTCGTCGTCCTCCTGTGCCGCCTCCCCTACGACCGCGGCGCCCGTCCCCGGCACCGCGCCGCGCGCCGCCGCGGCTGGCGATGGCGACGAGGGATGCGCGGCGGCCGCGGCCACGCCCGCGGACGTGGGAGGGGACGAGGACGACCTGAGAAGCCGCGTCTTCCGGCTGCGCCTGGCGAAGCGGAGCGCGACCGCGGCGCTCGAGAGGTGGGCCGGGGAAGGCCGCGCCGCGTCGGCGGCGGAGCTCCGCGGCATCGCCCGCGACCTCAGCCGCGCAGGCCGGTACAAGCACGCGCTCGAGGTTTGGCCGACCGACCCGCTATAGCTCTGATCTCTTCTAATCGTTCGTCTGTTCTGCGCGGTTGTAGAACTATTGGAAGATTCAGAGCAGATTTGGTGCATGCCTCTGTGATCTGTTCCTTGTACTCCTTGAAATTGCTAGGAAATGTTGGTGATTGGTGATGCGGTTCTATCTAGTCGTTGAAAAATGTTAGGTGGCGTATTTACTGCCTTCCACCATGGTTGTTGTGATGGAACATTCCGGTCATTTACGCGCTTTTAGCTTTGCCCTTCATTTTCTATTACTGATAGGTAGTGAAAAAGGCTTTTGATGAACTCATCTAGACATCTAGTAGTATTGACGTGTAAGGAGCTGTAATTTGTTGTCATCATAATTGCAGGCCAAATACTGCTATTTCAACACTTTATCCATGTATATCATGCTGTTTCATTACATTTGGTAATGAATGTTAACTATCATGAGGGGTGTTATTTACATGCTGGGCTACTATCTCTAGGTCTCTACAGTCTACTTATACCATCACTAAATTTGTTGTCGTCGAAATTGCAGGCCATATATTTTTGAACATTTTATCTCTGCCATATCATGCTATTTCACTTCACTTGGAAATGAATGTTAACCATCATGAGGGGCGTTATTTATGAGCTGATCTACTATCTTTAGGTCTCTGCAGTCTACATACATCATTACCGAATTTGTTGTCATCAGAATTGCATGTTTTTGAACATTTTATCCATACCATATCATGCTATTTCACTTCATTTAGAAATGAATGCCAACCAGCATGAGAGGTGTTATTTACATGCTGAGCTACTATTTTTAGGTCTCCACATACACCATTACTAAATTAAATAGGCCAGATTCTCTCTCACACCCACCCACCCAAAAAGGCCAGCATACTTGTTCTTGGTATATTGGTAACAATCATGATAGAATGGATTGAAAAGATTTAGCCACCAAACATTTACCTGGTCAGAGTTAATAGAGCATGCCCATTTAGTCCCTTTTTTATCTGATTGTTTATACTGATGCCCTATGGAACATTGTAAGCATGATAAAACAATTTGGTAATGTCTGGCATGTTTATCCTCCTATAAAATTATGTCAAAACTCAAAATAGTCAGCTCATACCTTAAAATTTTACAGGTAGCAGAGTGGATGAAGACACATCATGAGTCCGATTTATCTGAGAATGACTACGGAATGCGCATTGACTTGATTACCAGAGTTTTTGGTGCTAATGCAGCTGAAGATTTTTTTGAGAAACTTCCAGCTTGTGTGCAATCACTGGAAGCATATACAGCTCTCCTACATTCTTATGCTCGATCCAAGATGACAGACAAAGCTGAGAGGCTGTTTAAAAGAATGAAGGATGCCAACCTTTCCATGAATATCCTTGTTTACAATGAAATGATGACCCTGTACATTTCTGTTGGTGAGCTTGATAAAGTTCCGGTCATTGCTGAAGAGCTGAAAAGGCAAAAATTTTCCCCAGACCTCTTCACATACAATCTCCGGATCAGCGCTTCTGCGGCATCAATGGATCTGGAGGGCTTCAAAGGAATCCTTGATGAGATGTCAAAAGATCCAAACTCCAATGAAGGGTGGAAGCTGTACCAGAACCTCGCTGTGATTTACGTCGACGCTGGTCAGCTTGTTGGTTCAGGAAACTCGCTGGTGGAAGCAGAGGCGAAGATCAGCCAGAGGGAGTGGATCACATACGATTTCCTCGTAATCTTACACACCGGGCTCGGCAACCGGGATAGAATCAAGGACATTTGGAAATCCATGCTGATGACTTCACAGAGGATGACGAGTCGGAACTACATCTGCGTGCTCTCATCCTACCTGATGTGCGGGCAGCTGAAGGATGCCGGGGAAGTCATCGACCAGTGGCAGCGGTCGAAAGCCCCAGAGTTCGACATCTCTGCCTGCAATAGGCTGTTTGATGCCTTCCTGAACGCCGGTTTCACCGACACGGCAAATAGCTTCAGGGAACTGATGCTGCAAAAGAGCTGTATACTGACAAGCAGGCAAGAACGCTCTTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016508