Os08g0109900

From RiceWiki
Revision as of 12:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0109900| Description = Tudor domain containing protein| Version = NM_001067349.2 GI:297607880 GeneID:4344474| Length = 4512 bp| Definition...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0109900

Description

Tudor domain containing protein

Version

NM_001067349.2 GI:297607880 GeneID:4344474

Length

4512 bp

Definition

Oryza sativa Japonica Group Os08g0109900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:512763..517274

Sequence Coding Region

512942..513109,513374..513502,513914..514099,514653..514728,514824..514906
,515125..515232,515752..515844,517109..517174

Expression

GEO Profiles:Os08g0109900

Genome Context

<gbrowseImage1> name=NC_008401:512763..517274 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:512763..517274 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggatctgagcgtggaggagctcgcctccaatctctccacctacaaggagcagctccgcgaggttaggaagattatcaaggagaaaaacgatgatcctggaatttctgaataccttgatatggaaaaggaacttcaagaggtgagtatcctgcatgttattacattaacagaagagcttttggcaactgcaaatcaaagtgggaacacccagaatgatgtaggtctatcaccgccaaattattcaagcggactgcagtcagaggcactggatgacccttcgcaatcccatgagaagtttgcagttgggactaaagtgcaagctgtgtggagtgaagatggggagtggtacaatgcaacaattgaagaactgacagaaaacggctattatgtaagctttgagggctggggaaacaaagaggaggttgaccctgctaatgtaagatcgcttgaggaagaagctgctgatgctttgcgtcaagctgaaaaggaagctgaagctaccaaaatggcaataaagaggaaaattgaacaggcagcaacatctgactttcagatgcgtagcttacccaccaaactccgtatcgatccaaatgatccggaggatgtgaaagccacaaagcgtaagaagatccatgcattcaagtcaaaagcccgctttgagcagctagaatttgcacaaaataagaggcagaatgcatggcagcagttccaaacgaccaaagggaaagccaaaaaggttgggttcttttccggtcgcaaaaaggagagcatcttcaagtcaccggatgatcacagaggtaaggtcggtgtcactgggagcgggaaaggccttaccgagttccagagaagggagaagcacctccatctcaaggatggctcttccgatgcattggacgaggaataa</cdnaseq>

Protein Sequence

<aaseq>MEDLSVEELASNLSTYKEQLREVRKIIKEKNDDPGISEYLDMEK ELQEVSILHVITLTEELLATANQSGNTQNDVGLSPPNYSSGLQSEALDDPSQSHEKFA VGTKVQAVWSEDGEWYNATIEELTENGYYVSFEGWGNKEEVDPANVRSLEEEAADALR QAEKEAEATKMAIKRKIEQAATSDFQMRSLPTKLRIDPNDPEDVKATKRKKIHAFKSK ARFEQLEFAQNKRQNAWQQFQTTKGKAKKVGFFSGRKKESIFKSPDDHRGKVGVTGSG KGLTEFQRREKHLHLKDGSSDALDEE</aaseq>

Gene Sequence

<dnaseqindica>4166..4333#3773..3901#3176..3361#2547..2622#2369..2451#2043..2150#1431..1523#101..166#aaatcctacagaaaaaaaaaagaggagtctgaattgaggaatcaaatcgaggcggcggcggcggcggaggcgagggcatcggcggcgaggcgaggcggccatggaggatctgagcgtggaggagctcgcctccaatctctccacctacaaggagcagctccgcgaggtctcgcgccctaacccctatcctacctatctatgtggtgaagctgttttttttcttctcctttaaactcttcctgcgaattttccccgtacagtttcacgagcgtgatgtggagattgtgctctgcggcagagggagtacgcgcagtcgcgtgattttaggtctttcgagctgtcacagatgctgtttctttctccgtggattaggtctcgatttcgttcgagtttcagattctagggttttgttgcacgcatggttaggcgcagagtgcatatctattcaaacgttagttgttttttaaattctagtacatacctgtcgattgctaggaacttgatgcaggttagcttgaagtagtatgtgatttgaccttacaaatgtctacttgtatgcctttgtgtggttagcgtctgttaatgttggtatgctagtcataagtagcattggctacatttctcactatttacaacacagacaatcttatggaagaacagttaggcataaaaaagtgctattattctgaggatttggataggccaacaccaatagatactttgggggaaaattctgctaagttgggagggcgttgagaactgacaaaaaaaattcagaaagctgctggatagcctgccagtatcatgtttttcctttaagaattgatccttttttgttaataaagaagcaccggctactggaaatattggtaatatattacatgctcatatccaaaggttgccactttgtgtgttcatgtaatagattacctacctactggggcacaaaggatgcacctctcaatgttcatgtagttaggggttttgcggaatgtacctggtgcttaaaatttgaaaccttttgatgtatgttccaacttccaggcttgagcttgtgttgttgtgataataaatgtttaatgttataatatgctcactccttttaatctatttattatcagattcttttctcacttagactttgatattttagatcgactaatgatcatatgatcttctataaactcatggtgctctgtttcagtctgactgaaaactataactttttgatcagttgatcactcatttgcataaagcctgtggtagtaaatgtgtggtagtaaatgagctagacagactgctatgggtattcctcctcctagctgagttccattcaattcttatttctccccaaatccatttttgttatgaaaagcttctgagcaattagttcatgtacatcttgtgtaatctttctttgcttattgcaggttaggaagattatcaaggagaaaaacgatgatcctggaatttctgaataccttgatatggaaaaggaacttcaagaggtgagtatcctgcatgttgtatgttatgctgctgtgtactttgtgttgctaggtatcaactaattgtcagatgccatatcttgtacactaatgctaatatgacttgatgattttctacaaaaggatatttgctcttcattctattgctatcgatccctttttcttctttcttacaaggagccatgcccaacaaggtagcatgaaaaggcagcttgcaacatttttgtggggcatttaggttttattgtaaccttgaaaggtgagaaaggttgaatatgtcaatggtagggaatatctgagcaaccatgttaatagtaatgaccactaaatctaaaattccatggcttcaaagttgtccattaccctttatcttgattgattgcaggtctgtgtctcatggtagagtacctccttccgattttgggtgttgatgctgcttctctaagtttgaatcgctaaatatggacagatttaatgatattgggaggttggttcttgtgttgtacttaatgtgattttctgtaataactgcaggttattacattaacagaagagcttttggcaactgcaaatcaaagtgggaacacccagaatgatgtaggtctatcaccgccaaattattcaagcggactgcagtcagaggtagctctcttcattgttatattttttttcatttttggaagacatcattgttgaacttccgcattatttagttgccttgatcatcagtatgtgtcagccattccatgtaccagcaggagatttggaagttttacatttgttttactcatatagaaaatattcatgcacgtggatcttctgagatgtatcattatgctaacatacttctctggttttaggcactggatgacccttcgcaatcccatgagaagtttgcagttgggactaaagtgcaagctgtgtggagtgaagatggggagtggtaggtttcttctaatgcacctatttcttgtttcaaacattcaaccttttctgtttaggttctattacaacatatttgattagctgaattgtcaggtacaatgcaacaattgaagaactgacagaaaacggctattatgtaagctttgagggctggggaaacaaagaggaggtatgctcatctttggcgattggattttccttactgcatcactagcaaaattttgaacaattttgtatggtactagatgtgacatttaatttatgattatcacactaagtataaacttccacaatgatgtttttccctagcatgcaagtggttaagtttccataaacttatactgatactctgtggattaaatactatacagtttatatctgcaggccttttctgctgatgaagtgtttttgtagctgcatcatcctgctgtaatttcatcctgcttaggatccatttagttggttttttttgtgtttgcctggcttttaatagtcatttcatcattgacaaattccacgtcttccgttttggccaaagcgcaactcacaattttgtaagtcccaacttgaaaatgcaaataatgtaataaataggacatttgctagaatttatgcaaatattagttttattcaacagtgtaaagaggaaagcagattaccttgtgcttggttccttatttcgtggtgctgcatgcaaacagttaatttgctgcctcatataggttgaccctgctaatgtaagatcgcttgaggaagaagctgctgatgctttgcgtcaagctgaaaaggaagctgaagctaccaaaatggcaataaagaggaaaattgaacaggcagcaacatctgactttcagatgcgtagcttacccaccaaactccgtatcgatccaaatgatccggaggatgtggtaagttaatccttcttttcttctatatttaaaaatgcgagggagttggatattacttttcatatgctaccattctgcacgtgcctttccaactatggtagaaactctcacatccacctattgtgtgcccttaataatgaaacgactcaatttgacgattggatctgtttgccttggtactgatatttgtaaattgtaatcatgtaccacacatacaagtgagcatattcatgttcatgaaaacctcaggtatagtaaccttatgtagttctaagattatgtttatctggtattcatgctgtcttgttttaatgagaacctggtaagataacatgtacaagcctcagcattgcattctctgaagctacatcctgtggggccatatgttctgactgacctttgtatctgcagaaagccacaaagcgtaagaagatccatgcattcaagtcaaaagcccgctttgagcagctagaatttgcacaaaataagaggcagaatgcatggcagcagttccaaacgaccaaagggaaagccaaaaaggtactgtctctgccaccccactctaacttggccaggcacctctttctgagaaggatgtaaggtgctatatatacctcaaaatctagcatgttgtctagaacttccttattattttaagggtgggcaatgcccccaaatccaaacagaatttgtgagtcatccctgcttttttagtttatcacagcagacccttactgcttggtttagaattactttttcctcccttttacctttgttatcctgactttggtggtttgctttcaggttgggttcttttccggtcgcaaaaaggagagcatcttcaagtcaccggatgatcacagaggtaaggtcggtgtcactgggagcgggaaaggccttaccgagttccagagaagggagaagcacctccatctcaaggatggctcttccgatgcattggacgaggaataaaccggcttaggcttttagcttgtgagaggcgtatcacaaacaccgccatgtccggcgcttatttccggacctggtctgagtggagtttgtactcttgtaccaatgtatgctccacttgtccaaactagaaacaacataacattacataacatagagatattcatgttttatctgtcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0109900, RefSeq:Os08g0109900