BGIOSGA016522

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Revision as of 04:30, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016522| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016522, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016522

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016522, complete gene.

LocusTag

OSJNBA0027G07.7

Ensembl Transcript ID

BGIOSGA016522-TA

Ensembl Protein ID

BGIOSGA016522-PA

Length

5825

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:20825684..20831508

Sequence Coding Region

20825684..20825822,20829776..20830095,20830414..20831508

Genome Context

<gbrowseImage1> name=IndicaChromosome04:20825684..20831508 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:20825684..20831508 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGGAGGAGGATTTGCCGCCGCCGGCGGTGGCAGTGCTCGCGACTACGGCGGCGGCATCACTTTCTCCGTCGTGGTGACCAGCCTCATGGCCGCCTCCTGCGGCCTCATTTTCGGCTACGATTCTGGCGTCACAGGTGGCGTGACGCAGATGGAGTCATTCCTGAGCAAGTTCTTCCCCGAAGTGCTCCGTGGGATGAAGAGCGCGAGGCGCGACGCCTACTGCAAGTACGACAACCAATGGCTCACCGCCTTCTCGTCGTCGCTCTTCATCGCCGGCACGCTGTCCTCCCTGGTGGCGAGCCGCGTCGCCAGGGCGGTGGGCCGCCAGGCCATCATGCTCCTCGGCGGCGCCATGTTCCTCACCGGCTCCATCATCAACGCCGCCGCCGTCAACATCGCCATGCTCATCATCGGCCGCATGCTGCTCGGCTTCGGCCTCGGCTTCACCCTCCAGTCAGCTCCGGTGTATCTGTCTGAGACGGCGCCGGCGAGGTGGCGCGGCGCGTTCACGTCGGCGTACAACGCCTTCGTCGTGATCGGGATACTGTCGGCGACCATCACCAACTACTTCACCAACCGCATCCCGGGGTGGGGGTGGCGCGTCTCGCTCGGCCTCGCGGCCGTCCCGGGCACCATCATCGTCGCGGGGTCGCTCTTCATCCCGGACACGCCCAGCAGCCTCGTCCTGCGCGGCCACCACGACCGCGCCCGCGCGGCGCTGCAGCGCATCCGCGGCGCCGGCGCCGACGTTGACGACGAGCTCAAGGACATCGTCCGCGCCGTGGACGAGGCGCGCCAGAACGAGGCCGGCGCGTTCCGGCGGCTGTTCAGCAGGCGGTACAGGCACTGCCTGGCGGTGGGGCTCGGCATACCGGTGTTCTACGAGTTCACCGGCATGATCGTCATCTCCATCTTCTCGCCCGTGCTGTTCCGCACGGTGGGGTTCAACAGCCAGAAGGCCATCCTCGGCTCCGTGATCAACAGCATGACCAACCTCGCCTCCACGCTGCTGTCCACCTCCGTCATGGACCGCACCGGCCGCCGGCCGCTGTTCATCGTCGGCGGCGTCGGCATGATGCTCTGCGAGGTGGCCATCTCGTGGATCATGGCGGACCATCTCGGGAAGCACCAGGGGGTGACGATGCCGCGGAGCTACGCGACCGGGGTGCTGGTCCTGATCTGCCTCTGCACGTTCAGCTTCGGCTTGTCGTGGGCGCCGCTGAGGTGGGTGGTGCCGAGCGAGATCTACCCGGTTGAGGTCAGGTCGGCGGGCCAGGCGCTGAGCATCTCCGTCGCGCTCTGCCTCTCCTTCGTCGAGCTGCAGGTGTTCATCGCGCTGCTCTGCGCCATGAAGTACGGCGTGTTCCTCTTCTACGCCGGCTGGCTCCTGACCATGACGATCTTCGTCGCCGCCTTCCTGCCGGAGACGAAAGGCATGCCGATCGAGGCCATGCGGTCCGTGTGGGAGCGGCACTGGTACTGGAAAAGGTTCGTCAACGACGGCGACCACCACGACGGCCGTGTCGTCGCCGACGAGGGTACCGATTAA</cdnaseq>

Protein Sequence

<aaseq>MAGGGFAAAGGGSARDYGGGITFSVVVTSLMAASCGLIFGYDSGVTGGVTQMESFLSKFFPEVLRGMKSARRDAYCKYDNQWLTAFSSSLFIAGTLSSLVASRVARAVGRQAIMLLGGAMFLTGSIINAAAVNIAMLIIGRMLLGFGLGFTLQSAPVYLSETAPARWRGAFTSAYNAFVVIGILSATITNYFTNRIPGWGWRVSLGLAAVPGTIIVAGSLFIPDTPSSLVLRGHHDRARAALQRIRGAGADVDDELKDIVRAVDEARQNEAGAFRRLFSRRYRHCLAVGLGIPVFYEFTGMIVISIFSPVLFRTVGFNSQKAILGSVINSMTNLASTLLSTSVMDRTGRRPLFIVGGVGMMLCEVAISWIMADHLGKHQGVTMPRSYATGVLVLICLCTFSFGLSWAPLRWVVPSEIYPVEVRSAGQALSISVALCLSFVELQVFIALLCAMKYGVFLFYAGWLLTMTIFVAAFLPETKGMPIEAMRSVWERHWYWKRFVNDGDHHDGRVVADEGTD</aaseq>

Gene Sequence

<dnaseqindica>1..139#4093..4412#4731..5825#ATGGCCGGAGGAGGATTTGCCGCCGCCGGCGGTGGCAGTGCTCGCGACTACGGCGGCGGCATCACTTTCTCCGTCGTGGTGACCAGCCTCATGGCCGCCTCCTGCGGCCTCATTTTCGGCTACGATTCTGGCGTCACAGGTGCGTACTCTACTACAGCTACAGGCCATGACTACAGCTTCTTGAGCTGTTCCCAGCCCTGTTCTATGATCATTTCTACTAGCTTACAAGCATGTGGTCTTCAAAAAAATTCTTGCATGTTTAAAGCAGAATTGTTTCTTATTACATCCCCTCAAGGGATTAAAACAGTTTTCTCTTTTCGTTACTTATTTTACCTGGTTCCATTATAGCTGGTGTGAGAAATTAAGCAGTTTGTCAGAATGATTTATTTGGGATGATATTCTGATTTTGTCCAAGACTGGTCACTAGAGAACTTGGATTCCAATTAATCATTGGAAAGATGATGGATATTGAATTTGAAAATATGTATACAAGAATTATCTTACTCCATTCAAATGCATGCGGTACAACCGTACAAGCAGTGCGGATCACGATACACGAGATGCTTCCATCAGGCCTGGAAGAGTACACCTGAAAAACAAAAAAGAATAAACTCATGTGCAACAGCGCAAGCGACCATGTACTAATAAAATACGCTATCTGAAATTCTGAATTATTTAGCCATCAAGTCAACCCTTATTTGTATTGGAAATATCATCTCAATCAGGCCAGATTTGTTAGGATGCAGGAAGGCATCTATATATCCCGCCTGAAAGTTATGGGCTCCATCGGTTGCTTACGGGTGATTATAAGTTGTAATGGTTTATAAATAATAAAAAATTATTTATAGATGAAACTTTTACATATATATCCTTAGCCACTTAGAAGTCAATGCTGATGTTGAATAAGCATCGAAATCAACTTTAAAATTAAGTTTTAAAATTTAAGGGGTTGTTCAGATCGTAGCCAAGATAAATCTTACCAAATTTTGGTAATACCAAAATTTTGGCAATTTGACAATATTGCTAAAATTTTAGCAGGATTTCTTATGTATTTACTAAAGTTTGGCAAGAAACTAAATGGATGTACATATTGGGCAACTCTACCCAAAAAATGGTATCGTTTGAAATGGCATCAATTTGAACAAGCTCTAAATTTTAACAACGGTTTAAAGCATAGAGTAAACAACGAGGTCCTTGGACTTGTGGCAATGCTCAAAATTTTTTTCTATAGGAGAATTATATATATGCATACCCATACATTGGGGTATTGTGTGAGTGTGTTTAGAAAATTTCTCCTTCCGGTTATAAATATTTTTTTAATAATGTCCGGTTATAAATATTTGATATTTTATAATATAATTTCTCAAAATCTGAAACTATGGCCATCAATAATCTCTACTACTTAAAAAATAAGAGGTGCTTCCATCGTACGTAAAAAAACCAGACGAAGAAAACCGAGCGAAAAAACCGGGCGAAAAAAGAGTCCGATCAAAAAAGGAGAAAAAAAAGCGGGAGAAAAAAAATGACCGATCAAAAAAAACGGAGCGAAAAAAAAACCAAAAGACCGGGCAAAAAAACCGGGGTTAAAAAAGAGTCTGATCCAAAAAAAAGGGAGAAAAAAAAGAAAAAAATGTCCGATCCAACAAACCGGACCGAAAAAAAATTGTCCAATCCAAAAAAAATACGGGGCAAAAAAAAGAACTAAACGAATCGTTTAAAAAAAAGAGCGAAAAAGTTTTTTAAAAGTGTCCGATTTCAAAGAAAAAGAAATTATATGTGATACGGTGAAATAAACGACCGGACGAAAAAAATAAAAAAAGGGCGAAAAAAACAAATATGTACAATAAAAAAAGGAAAAAAAAAATCAAAACGAATCCGACTCCGTAGACTCGGTAAAAAAAGGGTGAAAAAAATAAAAAAAGTCCGATTCCAAATAAAAAGAAATTATATGTGACGCAGTAAATAAAATGGAATCCTATTTTATATCTAGAAAGGTCCGACACTATAAGAAAGTGGCGAAAAAAACCGTTCGTAAAAAAATGCACTACAAAAAAAATAAAAAGGGCGGAAAAATGTCTAATTTCTATTCGTCGTTTTAGTAGTCCGTTTATATCTCTTCTTTATCTCTAATCTAATCTAATCTAACTATTTTAAAAGAGAAGTTTCTACCGTATATTAAAAAAGAAATAAATGCCTGAGAAAATAAATACGGTTTAAAAAACGCGCGAGGAAAAAATGTCAGAAAAAAGCGCAAAAGAAAACGCGCTAGAAAAAAGTTCCGTAGTCCGTAAAAAAGCACCCGAGAAAAAAATATTTCCATCATCTATAGAAAAGAAAAAAAAAGCATACATGGAAAAAACTATTAGAAAGAAGCGCTAAATTGATGGACACTTGGTCGGATAGGATCCATTGACTTTTTTTCTATCTCCTACTAGTCTGTCCCAAAAAAAGCCAAACTCTGGTTATGTGTGTCCAGGTTCGTAGCTAGGATTGGACTTTTTTTTTGGGACGGAGGGGGTACACGACTTTTGTTTCGTCATCTATTCTCCTGTATTGGAGACCCTGCACATCTTCGTAGGCAATTATCATACTATTTTTGTGAAGTATAGCTACTATTCTTGATAACATATTATATGAAATAATATTAGAAAATAAACATATTTTAATTGTTATACAGATAAGAGTGGACGGTGACTCTATTTTGTGTAGACTTGATCATACGAGGTAATGCAGGACTTGATTGGTTGCAAGAATGAGATTAAAAGAATATTTTAGATTATATGCATGTTGTCATATGAATAATCCAATTATTTTAAGTAAAGCAAGCATCGTAAAGTTGCCATCATCGAGGTTGGGCTATTACATTTAAGATGTTCCAATTTTCTGATTGTCATCGACATGGTTATGCATGAAAAACGTATATTATCATTACGTTTTTTCACCCGTTGCAATGCACGGGCATATTTGCTAGTTTCTATTACATAGCAAACATGCACACATACACAAACATGATGTGTAGAAAACACACAAGATATTTTCATGGGTACCAAAAATTGAGTCCTGGTAGGTGGAGTTCGTGCACCAATAACTCCACCATCACACCATCGGTGTTTCTATTACGAGACAATCCATTATGTGCCTTAACTGGTCCCAATTCTATAATATGCCACTGAGTTTACCAGTTATACAATATACCATTGTATTTTGTTTAACTTCTATAATATATCATTGTCGTCTAGTTAGCCCCATTAGTATTGTACATTCCTAATGACTGAAATACCCCTGAAGAGAAAATTTCCAAAATTTGGCCGAAATTCCGAAATGTCATATTGTAAACTACCACGGAAATTGCCCATATCAAACTTTGGAAGTTTTACAATCTAATATTTCATAATTTTTTACCAAAATTTGGAAGTTTTTGTCCCAAGGGTATTTCGGTCATTAGGATAAAATTGTATAGCACTAACGGAGGCTAACTGGATGACGATGATATATTATTATTATGGAAGCTAAGCCAAATGCAATGGCATATTATAGAACTAGACAAACTTTGTGACATATTATAGAACGGGAACAAAGTCAGTGACACACAATGTATTCTCTCTTCTATTATCCTAATATAAAATTAATGGTTAAAGTTTGATAGAGGTACTACCTGATGCCTCCGAAAGGCATACAGAGAAGTAAAAGTGTGGGAAGGTTCAAGTTTTGATGTGTAAAATGGTGTACCAATTTTCCGGGTAAAAACTTAGGCATATACTCCACCTTATTTAGAGCCAAATTTAAATGTGGTACTGCTCAGAGCTAGGTTTGTTGTTCCTTTTTTTTGGGCACAGTTAAGCATGGCCAAGAAAAAAGACGTATACCATTCAATCATAGGATTTTAGTTCACGTTAAAATTGGAGGTTTGGTTAAAATTAGAATAATGTGATGGAAAAGTTGAAAGCTTGTATGTCAGAGAAGTTTTAATGTAATGAAAAAGCTGGAAGTTCGAAGAAAAAGTTTAGAAGTAAACTCAGCCATATTATTACTCCGTACTAGATACTGTATTACCGTGCTACTTGTCGGTCCATGACTCCTCGTTGATTACAGGTGGCGTGACGCAGATGGAGTCATTCCTGAGCAAGTTCTTCCCCGAAGTGCTCCGTGGGATGAAGAGCGCGAGGCGCGACGCCTACTGCAAGTACGACAACCAATGGCTCACCGCCTTCTCGTCGTCGCTCTTCATCGCCGGCACGCTGTCCTCCCTGGTGGCGAGCCGCGTCGCCAGGGCGGTGGGCCGCCAGGCCATCATGCTCCTCGGCGGCGCCATGTTCCTCACCGGCTCCATCATCAACGCCGCCGCCGTCAACATCGCCATGCTCATCATCGGCCGCATGCTGCTCGGCTTCGGCCTCGGCTTCACCCTCCAGGTACAACATGGAACACAATATGATCAGGGTTTATCATACCGTACGGTTATATCACATGCGGTAATCTTTTCAGTTTTTTGAAACCACGGTGTACCCCGCAATAACCGTATGGTTACCGTGGTAACCGTAAACCGCGGGGTGACGGTAACACTATCCCAAACAGTTTGGTAAACCCGTTTGGTTTGGTAACGCTGGATACGATACGATACACAAGGCCCAGCAATCTAGGCCCAGTTCATCAAATCCAGCTCAGTTCCAACTCTTCTTTTTTATATTTTTCCGGAAAAAAAAAGGGTTACATTTTTGTTGCTGGTACAGTCAGCTCCGGTGTATCTGTCTGAGACGGCGCCGGCGAGGTGGCGCGGCGCGTTCACGTCGGCGTACAACGCCTTCGTCGTGATCGGGATACTGTCGGCGACCATCACCAACTACTTCACCAACCGCATCCCGGGGTGGGGGTGGCGCGTCTCGCTCGGCCTCGCGGCCGTCCCGGGCACCATCATCGTCGCGGGGTCGCTCTTCATCCCGGACACGCCCAGCAGCCTCGTCCTGCGCGGCCACCACGACCGCGCCCGCGCGGCGCTGCAGCGCATCCGCGGCGCCGGCGCCGACGTTGACGACGAGCTCAAGGACATCGTCCGCGCCGTGGACGAGGCGCGCCAGAACGAGGCCGGCGCGTTCCGGCGGCTGTTCAGCAGGCGGTACAGGCACTGCCTGGCGGTGGGGCTCGGCATACCGGTGTTCTACGAGTTCACCGGCATGATCGTCATCTCCATCTTCTCGCCCGTGCTGTTCCGCACGGTGGGGTTCAACAGCCAGAAGGCCATCCTCGGCTCCGTGATCAACAGCATGACCAACCTCGCCTCCACGCTGCTGTCCACCTCCGTCATGGACCGCACCGGCCGCCGGCCGCTGTTCATCGTCGGCGGCGTCGGCATGATGCTCTGCGAGGTGGCCATCTCGTGGATCATGGCGGACCATCTCGGGAAGCACCAGGGGGTGACGATGCCGCGGAGCTACGCGACCGGGGTGCTGGTCCTGATCTGCCTCTGCACGTTCAGCTTCGGCTTGTCGTGGGCGCCGCTGAGGTGGGTGGTGCCGAGCGAGATCTACCCGGTTGAGGTCAGGTCGGCGGGCCAGGCGCTGAGCATCTCCGTCGCGCTCTGCCTCTCCTTCGTCGAGCTGCAGGTGTTCATCGCGCTGCTCTGCGCCATGAAGTACGGCGTGTTCCTCTTCTACGCCGGCTGGCTCCTGACCATGACGATCTTCGTCGCCGCCTTCCTGCCGGAGACGAAAGGCATGCCGATCGAGGCCATGCGGTCCGTGTGGGAGCGGCACTGGTACTGGAAAAGGTTCGTCAACGACGGCGACCACCACGACGGCCGTGTCGTCGCCGACGAGGGTACCGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016522