Os08g0110200

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Revision as of 12:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0110200| Description = Similar to Fertility restorer| Version = NM_001067352.1 GI:115474440 GeneID:4344477| Length = 2665 bp| Definition =...")
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Gene Name

Os08g0110200

Description

Similar to Fertility restorer

Version

NM_001067352.1 GI:115474440 GeneID:4344477

Length

2665 bp

Definition

Oryza sativa Japonica Group Os08g0110200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:535368..538032

Sequence Coding Region

535554..537950

Expression

GEO Profiles:Os08g0110200

Genome Context

<gbrowseImage1> name=NC_008401:535368..538032 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:535368..538032 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcacgccgtgtccgcgtcaccggccttgggcgacccgacgccggcgtctcgcgcacaaagaagcagcagcagaatcagggtcttcctcggcaacatcaacagcaacaggaagctggtggtggtggacgagctggtagggagcacgctcaccacctgttcgacgaattgcttcgccgagacaccacctccatcttcgacctgaacagcgccctctccgccgtcgcccgtgaaagccccgccgtcgctctctccctcttcaaccgcatgccccgagccgacttatgcacgtacagcatcgtcattggctgctgcagccgcgccggccacttggacctcgctttcgccgccctcggccgtgtcattaggactggatggacggcgcaagcaatcaccttcagtcctctgctcaagggcctctgccatgacaagaggaccagcgatgcaatggacattgcgctgcgacgaatgcctgccctgggttgcacgccgaatgcattctcctacaacatccttctcaagggcctctgcgatgaaaacaggagtcaacaagctctccacctactccatacgatgatggctgatgatactagaggaggatgcccacccgacgtggtttcatacaccacagtcatcaacggcttgcttagagagggtcagctggacaaagcttattgcctgtttgatgaaatgttggatcaggggatgtcgcctaattgcatcacgtataattgtcttttgcatggatattgctcatcaggaaagcccaaagaggccattgggattttcagaaagatgtgcagagatggtgttgaaccggatgtcgtcacttataacacgctcatggtctatctctgcaagaatggaagatccatggaagctagaaaagtttttgattctatggtcaagaagggccacaagcctgacagttctatatacggtactctgcttcatgggtatgctactgaaggatatcttgttcagatgcaccaactcttggatgtgatggtacgaaacggtacgcaacctgatcactacatctttaacatattaataggcgcatacgctaaacatggaatggtagatgaggccatgcttgcatttagcaaaatgaggcagcaaggattgcaccctaatatagtcacctatggaacagtaatggacgcgctttgcagggtaggcaaagtggatgatgctatgtcccaattcgacaggctcatctctgaaggactaactcctaatggtgttgtttttagaaccttaattcatggcctctgtgcctgtgataaatgggacaaggctgaggagttggctgttgaaatgatcggtcgaggcatctgtcccaacaccattttcttcaacacattgttgaaccacctatgcaaagaaggaatggttacaagagccaaaaacatctttgatttgatggtacgcgtagatgtgcagtgtgatgtcattacatacaccacactcatagatggatattgcttagatggtaaggtggatgaagcaacaaagttacttgaaggtatggtgttagatggggtgaaacctaatgaagttacctataataccattattaatggttactgtaagaacggtaggatagaggatgcatgttctcttttcagacagatggcaagcaagggtgttaatcctggcattgttatctatagcacaatcctccacgggctgtttcagactagaagaattgcagccgcaaaagaactctatctctggatgattaaatgtgggattaagcttcctattggaacgtacaacataatccttcaaggactttgccaaaacaattgcactgatgatgccctccgaatgtttcacaacctatgcttgattgatttccaccttcagaataggacttttaacattatgattgatgcgttacttaaaggtggcaggcatgatgaagctaaggatctgtttgcttctctcttggctagaggtttagtgccgaatgttgtgacctactggttaatgatgaaaagtttgatagaacaagggttgctagaagagttggatgatttatttctttctttggagaagaatggttgtacagctgactcccgaatgctaaatgctttagttggaaagttaccacagaaaggggaggtacgcaaggctggggtttatctctccaaaattgatgaaaataacttctcccttgaagcttccacggctgagtcgctggtttttctggtttcaagtggcaaatacgaccaacatataaattctatccctgaaaagtatcgtcctactgcgaaatccagggctgtttttagtcaaaaaaaaaatccagggctgtttgatgctgccggtagctatggagttgtaactagactttattcttcttcttatatcgaattagttgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MSSRRVRVTGLGRPDAGVSRTKKQQQNQGLPRQHQQQQEAGGGG RAGREHAHHLFDELLRRDTTSIFDLNSALSAVARESPAVALSLFNRMPRADLCTYSIV IGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPA LGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLR EGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDV VTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL DVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC RVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPN TIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKL LEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGL FQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHL QNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDD LFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLVFL VSSGKYDQHINSIPEKYRPTAKSRAVFSQKKNPGLFDAAGSYGVVTRLYSSSYIELVV </aaseq>

Gene Sequence

<dnaseqindica>187..2583#actggtcactgcccacccagattcctccgccggcgccggcgccggcagcggcagcggcggcggcagcggcggcggggtacaaagacgctccaacctgacgagcggtcgccttcctcccaaccccaccaagcccgcacgggagggagggagggagggagccctctctcaagcaagtccaggccggccatgtcgtcacgccgtgtccgcgtcaccggccttgggcgacccgacgccggcgtctcgcgcacaaagaagcagcagcagaatcagggtcttcctcggcaacatcaacagcaacaggaagctggtggtggtggacgagctggtagggagcacgctcaccacctgttcgacgaattgcttcgccgagacaccacctccatcttcgacctgaacagcgccctctccgccgtcgcccgtgaaagccccgccgtcgctctctccctcttcaaccgcatgccccgagccgacttatgcacgtacagcatcgtcattggctgctgcagccgcgccggccacttggacctcgctttcgccgccctcggccgtgtcattaggactggatggacggcgcaagcaatcaccttcagtcctctgctcaagggcctctgccatgacaagaggaccagcgatgcaatggacattgcgctgcgacgaatgcctgccctgggttgcacgccgaatgcattctcctacaacatccttctcaagggcctctgcgatgaaaacaggagtcaacaagctctccacctactccatacgatgatggctgatgatactagaggaggatgcccacccgacgtggtttcatacaccacagtcatcaacggcttgcttagagagggtcagctggacaaagcttattgcctgtttgatgaaatgttggatcaggggatgtcgcctaattgcatcacgtataattgtcttttgcatggatattgctcatcaggaaagcccaaagaggccattgggattttcagaaagatgtgcagagatggtgttgaaccggatgtcgtcacttataacacgctcatggtctatctctgcaagaatggaagatccatggaagctagaaaagtttttgattctatggtcaagaagggccacaagcctgacagttctatatacggtactctgcttcatgggtatgctactgaaggatatcttgttcagatgcaccaactcttggatgtgatggtacgaaacggtacgcaacctgatcactacatctttaacatattaataggcgcatacgctaaacatggaatggtagatgaggccatgcttgcatttagcaaaatgaggcagcaaggattgcaccctaatatagtcacctatggaacagtaatggacgcgctttgcagggtaggcaaagtggatgatgctatgtcccaattcgacaggctcatctctgaaggactaactcctaatggtgttgtttttagaaccttaattcatggcctctgtgcctgtgataaatgggacaaggctgaggagttggctgttgaaatgatcggtcgaggcatctgtcccaacaccattttcttcaacacattgttgaaccacctatgcaaagaaggaatggttacaagagccaaaaacatctttgatttgatggtacgcgtagatgtgcagtgtgatgtcattacatacaccacactcatagatggatattgcttagatggtaaggtggatgaagcaacaaagttacttgaaggtatggtgttagatggggtgaaacctaatgaagttacctataataccattattaatggttactgtaagaacggtaggatagaggatgcatgttctcttttcagacagatggcaagcaagggtgttaatcctggcattgttatctatagcacaatcctccacgggctgtttcagactagaagaattgcagccgcaaaagaactctatctctggatgattaaatgtgggattaagcttcctattggaacgtacaacataatccttcaaggactttgccaaaacaattgcactgatgatgccctccgaatgtttcacaacctatgcttgattgatttccaccttcagaataggacttttaacattatgattgatgcgttacttaaaggtggcaggcatgatgaagctaaggatctgtttgcttctctcttggctagaggtttagtgccgaatgttgtgacctactggttaatgatgaaaagtttgatagaacaagggttgctagaagagttggatgatttatttctttctttggagaagaatggttgtacagctgactcccgaatgctaaatgctttagttggaaagttaccacagaaaggggaggtacgcaaggctggggtttatctctccaaaattgatgaaaataacttctcccttgaagcttccacggctgagtcgctggtttttctggtttcaagtggcaaatacgaccaacatataaattctatccctgaaaagtatcgtcctactgcgaaatccagggctgtttttagtcaaaaaaaaaatccagggctgtttgatgctgccggtagctatggagttgtaactagactttattcttcttcttatatcgaattagttgtgtaaagatgacattctggagctacatgatgggagatttctctctctctctctctagcatgagtttttcagaagctcttttgcttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0110200, RefSeq:Os08g0110200