BGIOSGA016563

From RiceWiki
Revision as of 04:31, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016563| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016563, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016563

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016563, complete gene.

LocusTag

OSJNBA0060P14.2

Ensembl Transcript ID

BGIOSGA016563-TA

Ensembl Protein ID

BGIOSGA016563-PA

Length

1178

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:21421574..21422751

Sequence Coding Region

21421574..21421882,21421961..21422033,21422123..21422751

Genome Context

<gbrowseImage1> name=IndicaChromosome04:21421574..21422751 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:21421574..21422751 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGGCAGAGCAAGGTGGGTAGCAAAGTATACAAAGGGTCTTGTTGATGTGCTTCATGAGAACAATATTTCACACTACCGTACCCAGAATGGATGGAGAACCGATGGGTGGAGGAAAATTGTTAGCGAATTCAATGATAGGTACCCAGATGCAAAATTTACTAAAGTTCAAATTCAGGAGCATGAGACACAACTGAAGAGAGATTATAGATTGGTAAAATTAATTCTCCAGCGGGAAGGTGTTACTTGGGATCAAAATGCTTCCATGATTAGAACGACAGATGAAATCTGGGATGAGATAATTGAAGAGATGCCCAAGGCGCGGAAGTACCAATTTAAGAGCTTTCCGTTACTTCAATCACTTGAGGTGTTATTTGAAGGTGACATTCCTGAAGGGGAACACAACTTAATGCCGAGCAAACCTCAACTTGCTGGTAGGAATGTTGATGAGGGAGGCAATAACATGAGCACAGCTCCGAGCATACCTGGAAGACCTTGTAGCACAGTTATTGCCGGCATTGATGATGGGGAGAACAACATCGGCATACTTCAGAGAACTCCAGAGTTAGGGCAACAAGGTCTGGATGATGTTGATATTCTGCAAAATCCAACAGAAGAGGTACTGGAAAGACCACAGCACGGTGCCGACCCAAAACCACAAAGTGCTGATGAACCGGCGCACTCAAGCTCTTGCATAGAACCTCAAAAGGACAAGCGAAAGAAGCGTAAGGTCCCTGACATCCAGCAAACCATGGAGGCTTTTCTGGAGTTCAGAATGAAGCAAGCTCGCTTGAAGGAACAAGCGAAGAAGGAGAAGAAGGATGGTGAGCCGTTCTCGATCTCGACGTGTATCAAGGCACTGCATTCAATGACCGACGTATCTGATCAGGTCAAGATTCTAGCCTCTGATGTTTTCAAGGATGCAGCGAACCGAGAGATCTTCCTTTCCTACGATCTCAGGCTTCGCACGCTGTGGATCAAGAGGGAAGTCAACAGGTTACTCACTTGA</cdnaseq>

Protein Sequence

<aaseq>MAGRARWVAKYTKGLVDVLHENNISHYRTQNGWRTDGWRKIVSEFNDRYPDAKFTKVQIQEHETQLKRDYRLVKLILQREGVTWDQNASMIRTTDEIWDEIIEEMPKARKYQFKSFPLLQSLEVLFEGDIPEGEHNLMPSKPQLAGRNVDEGGNNMSTAPSIPGRPCSTVIAGIDDGENNIGILQRTPELGQQGLDDVDILQNPTEEVLERPQHGADPKPQSADEPAHSSSCIEPQKDKRKKRKVPDIQQTMEAFLEFRMKQARLKEQAKKEKKDGEPFSISTCIKALHSMTDVSDQVKILASDVFKDAANREIFLSYDLRLRTLWIKREVNRLLT</aaseq>

Gene Sequence

<dnaseqindica>1..309#388..460#550..1178#ATGGCAGGCAGAGCAAGGTGGGTAGCAAAGTATACAAAGGGTCTTGTTGATGTGCTTCATGAGAACAATATTTCACACTACCGTACCCAGAATGGATGGAGAACCGATGGGTGGAGGAAAATTGTTAGCGAATTCAATGATAGGTACCCAGATGCAAAATTTACTAAAGTTCAAATTCAGGAGCATGAGACACAACTGAAGAGAGATTATAGATTGGTAAAATTAATTCTCCAGCGGGAAGGTGTTACTTGGGATCAAAATGCTTCCATGATTAGAACGACAGATGAAATCTGGGATGAGATAATTGAAGTGAGCTTCGAACTCTTCAACTTCAGTTGTTATTTGTGTAATCAAGTGTGAATTTGATCATTTATTTCAATTTTATAGGAGATGCCCAAGGCGCGGAAGTACCAATTTAAGAGCTTTCCGTTACTTCAATCACTTGAGGTGTTATTTGAAGGTACCTTCTGTCCACTCAAATTGGATCAGGACAAACATTGTTATGTGTGCCTTTGCTTTTCTGAAACTAACGTGCTCTACTGTGAAAAGGTGACATTCCTGAAGGGGAACACAACTTAATGCCGAGCAAACCTCAACTTGCTGGTAGGAATGTTGATGAGGGAGGCAATAACATGAGCACAGCTCCGAGCATACCTGGAAGACCTTGTAGCACAGTTATTGCCGGCATTGATGATGGGGAGAACAACATCGGCATACTTCAGAGAACTCCAGAGTTAGGGCAACAAGGTCTGGATGATGTTGATATTCTGCAAAATCCAACAGAAGAGGTACTGGAAAGACCACAGCACGGTGCCGACCCAAAACCACAAAGTGCTGATGAACCGGCGCACTCAAGCTCTTGCATAGAACCTCAAAAGGACAAGCGAAAGAAGCGTAAGGTCCCTGACATCCAGCAAACCATGGAGGCTTTTCTGGAGTTCAGAATGAAGCAAGCTCGCTTGAAGGAACAAGCGAAGAAGGAGAAGAAGGATGGTGAGCCGTTCTCGATCTCGACGTGTATCAAGGCACTGCATTCAATGACCGACGTATCTGATCAGGTCAAGATTCTAGCCTCTGATGTTTTCAAGGATGCAGCGAACCGAGAGATCTTCCTTTCCTACGATCTCAGGCTTCGCACGCTGTGGATCAAGAGGGAAGTCAACAGGTTACTCACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016563