Os08g0110400

From RiceWiki
Revision as of 12:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0110400| Description = Protein of unknown function DUF266, plant family protein| Version = NM_001067354.1 GI:115474444 GeneID:4344479| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os08g0110400

Description

Protein of unknown function DUF266, plant family protein

Version

NM_001067354.1 GI:115474444 GeneID:4344479

Length

2553 bp

Definition

Oryza sativa Japonica Group Os08g0110400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:545844..548396

Sequence Coding Region

546233..546874,547520..548101

Expression

GEO Profiles:Os08g0110400

Genome Context

<gbrowseImage1> name=NC_008401:545844..548396 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:545844..548396 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggggggacgggaaggcgatgctgaagtcgcggggagggggggcggcggggggagcgggtggcgcctccggggacgaggaggcggactactgcccgccgacgccgcggaaggagtggtggacgacggggctcctcgtgaggctggtcaccgtggccgtcatcttcatggcgggcgtggtcatcgggctctccgcgagcgccaacgtgtcccgctactactacaactcgcacaccgagctcttcttcccgtcgaacaccttcggcgcgtgcgagcgcgccgactgcgccccgaccttcaagtcgttcgtccacccgccgcacctcgcgcactccatgtccgacccggagctcttctggcgcgcctccctcgtccccgtcgccgacgacttccccttccagcgcgtccccaaggtcgccttcctcttcatgacgcgcggcccgctccccttcgcgccgctctgggaccgcttcttccgcggccaccacggcctctactccgtctacgtccacaccctccccgactacaagctcaacgtctccaagaactccgccttcttcgcccgccagatccccagcgaggaagtgtcctggggatcgatcacccttgttgatgctgagaagcggctgctggccaatgccttgttggatttctccaatgagcggttcgttcttctctcggagagctgcatccccgtgttcaacttcccaaccgtctatgagtatctcataaactcggcacacagcttcgtggagtcctataacattgacacccctcaatgtgctggccgctacaaccggcggatggctcctcacatcttgccgagtcaatggagaaaagggtcagagtggtttgagctcaaccgtgaactggccttgcggataatagcagacaacaagtactactcaatcttcaggaagcattgcagaccatcttgttatccggatgagcattacataccaacctatctgcatttgtttcatgggtccctgaatgccaacaggaccatcacatgggttgattggtcaagaggaggtccacacccagcaagatatggtgcttcaaacatcagtgaagagttcatccaggctatcaggaataacggtacacgatgcacttacaactcgaagcccacttctgtctgctatctgtttgctaggaagtttgctcctagcgctctcgggccattgatgaacctcacttcgaccatattggacttttga</cdnaseq>

Protein Sequence

<aaseq>MWGDGKAMLKSRGGGAAGGAGGASGDEEADYCPPTPRKEWWTTG LLVRLVTVAVIFMAGVVIGLSASANVSRYYYNSHTELFFPSNTFGACERADCAPTFKS FVHPPHLAHSMSDPELFWRASLVPVADDFPFQRVPKVAFLFMTRGPLPFAPLWDRFFR GHHGLYSVYVHTLPDYKLNVSKNSAFFARQIPSEEVSWGSITLVDAEKRLLANALLDF SNERFVLLSESCIPVFNFPTVYEYLINSAHSFVESYNIDTPQCAGRYNRRMAPHILPS QWRKGSEWFELNRELALRIIADNKYYSIFRKHCRPSCYPDEHYIPTYLHLFHGSLNAN RTITWVDWSRGGPHPARYGASNISEEFIQAIRNNGTRCTYNSKPTSVCYLFARKFAPS ALGPLMNLTSTILDF</aaseq>

Gene Sequence

<dnaseqindica>1523..2164#296..877#ataaatcggagcacgcggcgcccaagcccctctcacttgcgccgcccgcccgacctcgccgccgaccacctcctcctccctcctcttcttcttccacgcgcttcccaccccccacctccatccttcgccgctaagcgaaaatcccgtgtcttcccttccttcctcccccgatccatctcgctctctcgattccttgctccgtgtgcgggttcggttcttgtggtgcgagatctgggcgcgagaggagaaaccccgatcttgatttgggtggcgtcgcgtcgcgtcggcggcggtgatgtggggggacgggaaggcgatgctgaagtcgcggggagggggggcggcggggggagcgggtggcgcctccggggacgaggaggcggactactgcccgccgacgccgcggaaggagtggtggacgacggggctcctcgtgaggctggtcaccgtggccgtcatcttcatggcgggcgtggtcatcgggctctccgcgagcgccaacgtgtcccgctactactacaactcgcacaccgagctcttcttcccgtcgaacaccttcggcgcgtgcgagcgcgccgactgcgccccgaccttcaagtcgttcgtccacccgccgcacctcgcgcactccatgtccgacccggagctcttctggcgcgcctccctcgtccccgtcgccgacgacttccccttccagcgcgtccccaaggtcgccttcctcttcatgacgcgcggcccgctccccttcgcgccgctctgggaccgcttcttccgcggccaccacggcctctactccgtctacgtccacaccctccccgactacaagctcaacgtctccaagaactccgccttcttcgcccgccagatccccagcgaggtcacttcttctttcatctactactactttattattattacttccttttcttttcttttcttgttaaattaccattgaatcattgcaatccaatgaatccgccgagtagcatttgcattgtccaactccaatgaattagctggtgccttggtggattgatgaatccgaggtgttagttgtctagttggtggctgccatgtgcgtgctcaacttgattgggatttgtttgcaaatgggagaggatttgctctaggggaatatgcttgcctgcctttcatgctaggttggttatctactcggttgctttttctgattttagacgaatatcggatgcttgctcaacgatttccactcagtttgtttgcttaatttcatcagccaatacattttttgggctgtttcgattttgctcctaaagcagctgttttgactgatgccttgatatgccttttctcccgtttactttttggctaaggaattccagccatctggcattctggcaaacaacttgtcatcctattcagaaacagctagcaacataaaaataatgaaaacttctctctgtgatcatgtaatgcgtgtatttagtttctgctgcaattctcttgtgcacattctgatatatttctttcttgtttactgcaggaagtgtcctggggatcgatcacccttgttgatgctgagaagcggctgctggccaatgccttgttggatttctccaatgagcggttcgttcttctctcggagagctgcatccccgtgttcaacttcccaaccgtctatgagtatctcataaactcggcacacagcttcgtggagtcctataacattgacacccctcaatgtgctggccgctacaaccggcggatggctcctcacatcttgccgagtcaatggagaaaagggtcagagtggtttgagctcaaccgtgaactggccttgcggataatagcagacaacaagtactactcaatcttcaggaagcattgcagaccatcttgttatccggatgagcattacataccaacctatctgcatttgtttcatgggtccctgaatgccaacaggaccatcacatgggttgattggtcaagaggaggtccacacccagcaagatatggtgcttcaaacatcagtgaagagttcatccaggctatcaggaataacggtacacgatgcacttacaactcgaagcccacttctgtctgctatctgtttgctaggaagtttgctcctagcgctctcgggccattgatgaacctcacttcgaccatattggacttttgagttactcaccattcttcattggcatcacgctaccggactatctccatcggcacacatactccatgaggagtagcggtacactatacatgtttgggggcatgtatcgcatgacagatggatcggagacgcctttcgatgagtcgtcacccatctctgatggatgatgctgtgcgggcagtgaagattacttcacctgccctgaagctgattcctgagtataggatgaatggagctgcatacggagaggacttttgtttcacctcccattctttttattatatcatagctatatgatattagagcttttctttttcttctttccccatccattgtaatgacttggtcaggatactaatttctgtgaatataacctatcaatcattgctttt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0110400, RefSeq:Os08g0110400