BGIOSGA016589

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Revision as of 04:31, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016589| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016589, complete gene.| tag = OsI_162...")
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Gene Name

BGIOSGA016589

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016589, complete gene.

LocusTag

OsI_16274

Ensembl Transcript ID

BGIOSGA016589-TA

Ensembl Protein ID

BGIOSGA016589-PA

Length

3112

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22027578..22030689

Sequence Coding Region

22027578..22027954,22028002..22028284,22029004..22029055,22029295..22029362,22029449..22029552
,22029648..22029735,22030372..22030689

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22027578..22030689 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22027578..22030689 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCATCGGATTCACCACTTGATGTCAGACTGCAGAGAACAAATTCAGATGTAAGAGTACCTGGTGTCACCGCAGCAGCATTAAGAGCTGCAGCTGAGGCTGCTGAAGATGTTCTGAAGGAGAAATACTCTGGAAGTGTGTTTAGGAGATTGGGTAGAAAGGGCATGGTGAATGCTGCTGAGGAATCCTTTGGTTTCAGTGAACAAGGTCGAGAAAGAGAATATGGTGATATAGATAATGTCCAAGCAGAAAATCAACTAGATGTTCATGGAAGAAATCATTATGCAGGTGATGCTTATATGTATGACCGGGAGGCAGCCAAAGGCACTGATTCTGCATCAGATATCGATCGGCATGATGATACTGGTGCAGCTAGGCAAAGAATCAGTAGTAGCGGGGTCAATACTGTTGAAGGAACTACAACCATTAGAAGCAGAAGGTCTATAATGCAGGACCCACATGCTAGTTCAGGGCGAGGACCATCTGAAAGGATTAACATGGTTAACAATATTACACAAAAGCCTGCCAACCAGGCAACAAGAAGGAATGCTGTGAAGATAGAGCCTCAAGTGCCCACAGAGATGAAACATACTGACTCAAGAAAGTCAACTGCGACACTTGCACATGTTAACAATACTCCAATGACTGACAAGTCCAAAGATTCAATGTGTTCAAGCTCTATGGTGGAGGAACAGAAGCTTCCATCACTTGCTGTTGGATCATGCAGTACAGGTCAGCCAGAAGGTGGCACTGATTCTAGAACAGTTTTTCTTTCCAATGTACATTTTGCTGCTACAAAAGACGCTCTTTCCCGTCATTTCAATAAGTTTGGAGCTGTGCTTAAAACTCTTATTGTGACTGATATTGCTGGTCAGCCAACAGGCTCAGCGTACATTGAATTCTTGCACAAAGAGTCAGCAGAACAAGCCCTAACTCTTGACAACACATCTTTTATGTCGCGCATGCTCAAGGTTGTTAGAAAGAACTCTCTCGAAGTGTCTCAACAGTCTGGCTGGCCCCGTGGTTCTCGGGGATCAACATTCCCTTCAAGACTCACTAGAACTGCATACCCAAGGCCAGCATTTCCTGGTGCTATGCGTGGGCGTCTACCACTCAGAGGTGGTGCTCGGAGCTTACAATGGAAGCGTGATAATGCTGATACTGTCGATGCGGCAAAACCTGGTCACAGCACACCTATACCTACCGGTAATCAGTTGATAAGCCCAGTTGTGCGGAGCTTCACCTACACACGTGCTGAGCAAAAACAGGACGTTGGTGCGACCATTTGA</cdnaseq>

Protein Sequence

<aaseq>MPSDSPLDVRLQRTNSDVRVPGVTAAALRAAAEAAEDVLKEKYSGSVFRRLGRKGMVNAAEESFGFSEQGREREYGDIDNVQAENQLDVHGRNHYAGDAYMYDREAAKGTDSASDIDRHDDTGAARQRISSSGVNTVEGTTTIRSRRSIMQDPHASSGRGPSERINMVNNITQKPANQATRRNAVKIEPQVPTEMKHTDSRKSTATLAHVNNTPMTDKSKDSMCSSSMVEEQKLPSLAVGSCSTGQPEGGTDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTDIAGQPTGSAYIEFLHKESAEQALTLDNTSFMSRMLKVVRKNSLEVSQQSGWPRGSRGSTFPSRLTRTAYPRPAFPGAMRGRLPLRGGARSLQWKRDNADTVDAAKPGHSTPIPTGNQLISPVVRSFTYTRAEQKQDVGATI</aaseq>

Gene Sequence

<dnaseqindica>1..377#425..707#1427..1478#1718..1785#1872..1975#2071..2158#2795..3112#ATGCCATCGGATTCACCACTTGATGTCAGACTGCAGAGAACAAATTCAGATGTAAGAGTACCTGGTGTCACCGCAGCAGCATTAAGAGCTGCAGCTGAGGCTGCTGAAGATGTTCTGAAGGAGAAATACTCTGGAAGTGTGTTTAGGAGATTGGGTAGAAAGGGCATGGTGAATGCTGCTGAGGAATCCTTTGGTTTCAGTGAACAAGGTCGAGAAAGAGAATATGGTGATATAGATAATGTCCAAGCAGAAAATCAACTAGATGTTCATGGAAGAAATCATTATGCAGGTGATGCTTATATGTATGACCGGGAGGCAGCCAAAGGCACTGATTCTGCATCAGATATCGATCGGCATGATGATACTGGTGCAGCTAGGTATAATGATTCGGTATCTTGCCGAAGTACATTGCCTTCTAGTATAGGCAAAGAATCAGTAGTAGCGGGGTCAATACTGTTGAAGGAACTACAACCATTAGAAGCAGAAGGTCTATAATGCAGGACCCACATGCTAGTTCAGGGCGAGGACCATCTGAAAGGATTAACATGGTTAACAATATTACACAAAAGCCTGCCAACCAGGCAACAAGAAGGAATGCTGTGAAGATAGAGCCTCAAGTGCCCACAGAGATGAAACATACTGACTCAAGAAAGTCAACTGCGACACTTGCACATGTTAACAATACTCCAATGACTGACAAGTCCAAAGTAAGTTTCTGTACTTTCCAAGGGATAGCCGTTTCACGCATTTTGAAACTTTAAACTGGCTTGGCTCATGAACATCTACAGCATATGACAAATCTTTTCACATAGAATAAGCTTGATTTGTTGCACCAAATGTTTTAGTTCAGTCCTCACGTGCTCAGTATACTTGGAATTGTAATCTTAAGTTAAGGCATCCAGGCTTTAGCTTGGTTGGTATATCCTTCAACAAACTTTGACTTGCTAATTGATTTTAAAAAAATAACACTGTAGAGGGAGGACTGGAACTCCAAATTCATATTGTTTACCTGAGATTATTTTCTCTAAAACATGTGTTGGAAAACACGTCCCATGGGTTCGTAAGAACATACAGCACACACCATTTTTTATTCTTCTATCTATCTATACTACGCCACAAGCTTGACATCTGGGGCCATGAGGTCCCCACGCGACAATGCTTTTGCTTTGATATGTCATCAACTAACTATGCTATAAACTTGCAATATTTTGCTTTTGCCTTTATCTCTTATAATATTCGTTGCAACGAACGGGCCTTTAGCTAGTGCGCAAATAATAAAGCGTGTCTGGGTTGTTGGCGTCTCCATTTGCATCTCTATTTAAGTACTCTTTATCTGTGTCTTCTGTCTAATCCTCTTACTTGAGTTTCTTCTGTGCTGTGACTTGTATGACGAATTTGTAATTAATTTTTTTCTTAAATTTTACAGGATTCAATGTGTTCAAGCTCTATGGTGGAGGAACAGAAGCTTCCATCACTTGGTATGTAGCACTTGAGTGTTGATTATCACAGCTACACGATGCATTGAGCTTTTATATCAGCACGCAACACCATGTTTGATTATGAGACACCTTTATTTAATTGAAAGTCATCATCTAAAACATCTCTACTGTGTAGACTTTTTAAACCCCTAACCTTACTTATTTTACATGTTGATTCTGTGGCTTTTTTTCAACACCCTCAATGACTCAGAAATTTTCCTCCTCTTGCCCCCTTCCAGCTGTTGGATCATGCAGTACAGGTCAGCCAGAAGGTGGCACTGATTCTAGAACAGTTTTTCTTTCCAATGTAAGTGTCTCGTACTACCATTTCATTTGTGAAGCTGAGAAGCTGCCTTTATTACTATTTACTAACGATTGTTCTCGTGTTTATAGGTACATTTTGCTGCTACAAAAGACGCTCTTTCCCGTCATTTCAATAAGTTTGGAGCTGTGCTTAAAACTCTTATTGTGACTGATATTGCTGGTCAGCCAACAGGGTATGAATTCCAAGTCTTCTCTTCATTCTGAAGCCTGAACAGCAGAGTTATTTTAGACATTATCCTCATTTTTTTTCTTTGTGTTGTCCATTCAGCTCAGCGTACATTGAATTCTTGCACAAAGAGTCAGCAGAACAAGCCCTAACTCTTGACAACACATCTTTTATGTCGCGCATGCTCAAGGTAAAACCCCATGTTGACCTTTCTATTGTGCACTAAAACTCTACAACTCTATTAAATATTGTGGATCGCTATGCAAGATCCAGCTGCTCTAGTAAGCTCGCTATAGTTTTATTTGTATGGGAGAATATATTAGTTGAGCTGCTTCACTGCACACAAATTGCCAGCTGAATTGTGTATTTATCGTTAGATCACTAGCTAAATACCCGCGCTTCGCTACGGATACAAATGAATTATGCATGTGCTAACATATTTTGGAACAAGTTTGTAAGGTTTTTGGAACAATATCATCCCTGATTCCCTGTGGATGTCTTTGCATGGTAAACTTAAATTCTAGAGATGAAATAAGATATTAACAATATGTAGAAGTACTGTTTTATAAAATTAAAGTACATAAAAGCGTAGGTGGTAAAAAATACAACAGAGTTGGTGGGTGGCAGATTCACTGCCACCACCATTTTCTTCTTTTATAGATACCTGTTGGTAAACTGTAAAATAAAAAAAAATCATTGCCATTGCAGTCAAAACCTTTTCAGTGTTGTAATTCCTGGCAGAAAGATCCTTTTCAGTAGTTCCTCTTCATGGCTTGCCAAGTTGCCATGCATTCATGATCTCAGCAATTAACTGTGTATACTGCAGGTTGTTAGAAAGAACTCTCTCGAAGTGTCTCAACAGTCTGGCTGGCCCCGTGGTTCTCGGGGATCAACATTCCCTTCAAGACTCACTAGAACTGCATACCCAAGGCCAGCATTTCCTGGTGCTATGCGTGGGCGTCTACCACTCAGAGGTGGTGCTCGGAGCTTACAATGGAAGCGTGATAATGCTGATACTGTCGATGCGGCAAAACCTGGTCACAGCACACCTATACCTACCGGTAATCAGTTGATAAGCCCAGTTGTGCGGAGCTTCACCTACACACGTGCTGAGCAAAAACAGGACGTTGGTGCGACCATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016589