BGIOSGA016602

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Revision as of 04:31, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016602| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016602, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016602

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016602, complete gene.

LocusTag

OSJNBA0022H21.20

Ensembl Transcript ID

BGIOSGA016602-TA

Ensembl Protein ID

BGIOSGA016602-PA

Length

3303

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22225706..22229008

Sequence Coding Region

22225706..22226023,22226570..22229008

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22225706..22229008 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22225706..22229008 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAATGAAAATTGGGGGCAAAATCTTGCAAATTCCTTACTTTCTGATCCGCTCCATGGTTCGTGCTTCAGTGACCCTTCCCCTCCATCTCGGACAAGCTCATGGACCAGGCAGCGGCGAGGATGATAAGTTAGGATTTGGGGTTGGGGCGGGGGCAGTTTCCTGGGTTTGGAGGGAGGTCTGGGCAGTACTGGCACAACCAGAGTCACTGAGTCAGGAGAGGGCAGTGGGAGGGCTCAGCAGCAGGGACGAAGGGGAACGAGAAGTTCCGAGGTGGATGACAGCACTAGCCGCCGGGTATGGGGAAGGAGGTGGCGTTTCTGATTACCCAAGTGCAGATGTGATGGACACCCATCACAGCGATCAATATGCAAAGAGCAGCCTGCAGCTGCAATTCAGGGACACCTCTGTTTCCTTTGAAAACAACAATTCTGTTTTGGATAAGCATGATATTACAAGCCCTCAAGTTGGCATGACTTTTGAGACAGCCGATTTGGCATATCGGTTCTACTTAGAATATGGCTACCGTGCAGGGTTCGGGGTCTCAAAGAGGACTTCCCATAGTGTTGATGGGGTGAAATACCGTGCAACATTTGTTTGTTACAAAGGCGGCATTGCTAGGATCAAGCCTGGTCTCAAAGCTCGAAGGAGGCTTGTTGCAAAGACTGGTTGCAAAGCAATGATGGTAGTCAAGTATAACACAACTGAAAACCAGTGGGAGGTAGTTTTTGTTGAGCTGGAGCATAACCATCCATGTAATCCTGAAATGGTTAGATTCATGATGTGCTTTAAAGATCTCCCTGACTGGCAGAGAGAGCACCGCCCATTCAATGCCAAGACTAGATTGAATCCAAAGATTCACTCTGGCAGAGGCAGGCCACCCAACCAAAACAAAGACTTCATGGTGAAAAAAACCTTCTCACAATCAAATTATTCCATTGAAGCAGCAGGCAAGGCTGGAAAGCTGAGATTTGCAGAGGGTGATGTTGAGGCACTCTTGGTCTTCTTTGATAAGATGCAAGCTCAAAATTCAAACTTTTTCTACAACTGGGACATGGATGATGAAGGTCGGCTCAAGAATGTTTGCTGGGTCGATGCTAGATCGAGAGCTGCATACCAGCACTTCTGTGATGTTGTTTGCTTTGATACTGTTTATTTGACATACCAATTTGTCATTCCATTGGTTGCTTTTCTTGGAATCAACCATCATGGGCAATTTGTGTTGTTGGGATGCGGTTTACTTGGGGACGAATCTCCAGAGACTTTTTCTTGGTTATTCAAGAAATGGCTAAAATGTATGAATGATAAATCACCTGAAGCAATTATTACCACCCACTCAAGACCAGTGGTCAAAGCTGTTGCTGAGGTATTTCCAAATACTCGTCACAGATACAATCTTTGGCATATCATGAAAGAGCTTCCTGAAATGTCTGGAAGAGTTGAGGATAAGGAGGCAATTAGCCTAAGAATGAAAAAGGTAGTCTTCGACACTATTACATCAACTGATTTTGAGAGGGAATGGGTTGAGATGGTCAATCAGTATAACCTTCATGATAATCATTGGCTTACAACCTTATTTGAAGAGAGGGCAAAATGGGTACCAGCATATGTCAAGGATACTTTCTGGGCTGGTATATCCACTGTTCGCCGCAGTGAGCGGTTGGAGGCCTTTTTTGATGGATACATTACACCAGAGACCACAATTAAGACATTTATTGAACAATTTGATACTGCTATGAAGCTTAGGTCTGACCGAGAAGCGTATGATGATTTTCGCTCATTTCAGCAAAGGCCTCAAGTCTTGTCTGGTCTACTCTTTGAGGAGCAATTTGCAAATGTTTATACAATAAATATGTTTCAGAAGTTCCAAGATCACTTGAAGCAGCTGATGAACGTGACTTGCACTGAAGTCAGTAGGAATGGATCAATAGTGACTTACACTGTGACCGTCATTGGTAAGGAGAGGAAGTATGACTACAAAGTGATGTATAACAGTGCTGAGAAAGAGGTGTGGTGTATCTGCAGGTCCTTCCAGTTTAAAGGTATTTTGTGTAGCCATGCTCTTGCTGTCTTGAGACAGGAACTTGTGATGCTGATACCTTATAAATATATTCTCGATCGCTGGAGGAAGGACTACAAATGCCCCGAGGAATCCAAGGAAACTCCCATCTCACCAAAAGCGATCAAAGCTACAGGGAAGGGCACAAAACCGGAAAATGCCCGTGAAGATAAAGTGGACAATCTGTACAAGCATGGTCACCAGTACTTTGCTGACATTGTGGAAATGGGAGCAACGGACCCTGATGCAATGGAGTATGTTTTGTCGGTCATGAAAGAAGCCAAAGAAAAGGTACGGAAGTTCGAGGAATCTCGGAAAGATAGAAGGCCTGGAGACAGTCCAGTTTCTACTGGTAAGAGAAATGGCAAGTCTTCAAGACCATCCAATGATGATGGGGGCAATGGCATATCAGATTCAACACCTGCGACTACAACAGTGCCGACAGTCGCGGTGGCCACATCTACAACAATGCAGGCAACGCCTACAATGGTGGCTATAGCGCCTACTTCGGCAACTGTGCCCGCCGGAATGTTTTTGGTACCAATGCACCCACATCCGATGGTTTTCCCACCTTTCACCCCTGCAGTACCACCAGTGGTAGCACCTGCAGTGCCACCTCCAGCACCAGCAGCCAATGTGGGTGATGTGGCTTCCAACTCCACAAGGAAGAGAAAGAAAAGAAAGGGGAACAAATGA</cdnaseq>

Protein Sequence

<aaseq>MGMKIGGKILQIPYFLIRSMVRASVTLPLHLGQAHGPGSGEDDKLGFGVGAGAVSWVWREVWAVLAQPESLSQERAVGGLSSRDEGEREVPRWMTALAAGYGEGGGVSDYPSADVMDTHHSDQYAKSSLQLQFRDTSVSFENNNSVLDKHDITSPQVGMTFETADLAYRFYLEYGYRAGFGVSKRTSHSVDGVKYRATFVCYKGGIARIKPGLKARRRLVAKTGCKAMMVVKYNTTENQWEVVFVELEHNHPCNPEMVRFMMCFKDLPDWQREHRPFNAKTRLNPKIHSGRGRPPNQNKDFMVKKTFSQSNYSIEAAGKAGKLRFAEGDVEALLVFFDKMQAQNSNFFYNWDMDDEGRLKNVCWVDARSRAAYQHFCDVVCFDTVYLTYQFVIPLVAFLGINHHGQFVLLGCGLLGDESPETFSWLFKKWLKCMNDKSPEAIITTHSRPVVKAVAEVFPNTRHRYNLWHIMKELPEMSGRVEDKEAISLRMKKVVFDTITSTDFEREWVEMVNQYNLHDNHWLTTLFEERAKWVPAYVKDTFWAGISTVRRSERLEAFFDGYITPETTIKTFIEQFDTAMKLRSDREAYDDFRSFQQRPQVLSGLLFEEQFANVYTINMFQKFQDHLKQLMNVTCTEVSRNGSIVTYTVTVIGKERKYDYKVMYNSAEKEVWCICRSFQFKGILCSHALAVLRQELVMLIPYKYILDRWRKDYKCPEESKETPISPKAIKATGKGTKPENAREDKVDNLYKHGHQYFADIVEMGATDPDAMEYVLSVMKEAKEKVRKFEESRKDRRPGDSPVSTGKRNGKSSRPSNDDGGNGISDSTPATTTVPTVAVATSTTMQATPTMVAIAPTSATVPAGMFLVPMHPHPMVFPPFTPAVPPVVAPAVPPPAPAANVGDVASNSTRKRKKRKGNK</aaseq>

Gene Sequence

<dnaseqindica>1..318#865..3303#ATGGGAATGAAAATTGGGGGCAAAATCTTGCAAATTCCTTACTTTCTGATCCGCTCCATGGTTCGTGCTTCAGTGACCCTTCCCCTCCATCTCGGACAAGCTCATGGACCAGGCAGCGGCGAGGATGATAAGTTAGGATTTGGGGTTGGGGCGGGGGCAGTTTCCTGGGTTTGGAGGGAGGTCTGGGCAGTACTGGCACAACCAGAGTCACTGAGTCAGGAGAGGGCAGTGGGAGGGCTCAGCAGCAGGGACGAAGGGGAACGAGAAGTTCCGAGGTGGATGACAGCACTAGCCGCCGGGTATGGGGAAGGAGGTGGCGTAGGGGCAGCGGATGCAAGGAAGATGGATCGGTGCAGTGGGATATGGAGGAAGGGAAAGTGGAGGGGAGGGGGTGGGATGCATCGTCTGTAGAGGTGGCAGCAGTTGGGGATGGATTTGCTGTCGGCGACCTGACGCCTCTAAGGTAGAGGGTATGCAGTGGTGGAGATTGGTTAGCAGGGGCGGCGTTGAGTGATGGCTGGGGGATGGTGTTTACATTATTGGAGGAGGAGAAGATATGGGCCTTTGGATCTCAATCAAACAGTCAAAAAGCGTACCATTTAGTGTAAAAAAAAAACTTACCAATTATATATAGTCAGCCCCATAATTTTAGGCACATATATTGGTCATATATTCAAGATGCTGATACCAATTATTTGCATTTCCCCATGTCATATTTAGTAATTACAAGTTACGTTTATGGTCTATCAATAACAGTTGTATCAGCAAAATTACATGTTTATGATCTATTGTCAATTTTGTTTCGTGTACTGTATTCCAAGATGCTTACACTCTCGTGGGTGTTCAATTTCTGTCTCGATATAGGTTTCTGATTACCCAAGTGCAGATGTGATGGACACCCATCACAGCGATCAATATGCAAAGAGCAGCCTGCAGCTGCAATTCAGGGACACCTCTGTTTCCTTTGAAAACAACAATTCTGTTTTGGATAAGCATGATATTACAAGCCCTCAAGTTGGCATGACTTTTGAGACAGCCGATTTGGCATATCGGTTCTACTTAGAATATGGCTACCGTGCAGGGTTCGGGGTCTCAAAGAGGACTTCCCATAGTGTTGATGGGGTGAAATACCGTGCAACATTTGTTTGTTACAAAGGCGGCATTGCTAGGATCAAGCCTGGTCTCAAAGCTCGAAGGAGGCTTGTTGCAAAGACTGGTTGCAAAGCAATGATGGTAGTCAAGTATAACACAACTGAAAACCAGTGGGAGGTAGTTTTTGTTGAGCTGGAGCATAACCATCCATGTAATCCTGAAATGGTTAGATTCATGATGTGCTTTAAAGATCTCCCTGACTGGCAGAGAGAGCACCGCCCATTCAATGCCAAGACTAGATTGAATCCAAAGATTCACTCTGGCAGAGGCAGGCCACCCAACCAAAACAAAGACTTCATGGTGAAAAAAACCTTCTCACAATCAAATTATTCCATTGAAGCAGCAGGCAAGGCTGGAAAGCTGAGATTTGCAGAGGGTGATGTTGAGGCACTCTTGGTCTTCTTTGATAAGATGCAAGCTCAAAATTCAAACTTTTTCTACAACTGGGACATGGATGATGAAGGTCGGCTCAAGAATGTTTGCTGGGTCGATGCTAGATCGAGAGCTGCATACCAGCACTTCTGTGATGTTGTTTGCTTTGATACTGTTTATTTGACATACCAATTTGTCATTCCATTGGTTGCTTTTCTTGGAATCAACCATCATGGGCAATTTGTGTTGTTGGGATGCGGTTTACTTGGGGACGAATCTCCAGAGACTTTTTCTTGGTTATTCAAGAAATGGCTAAAATGTATGAATGATAAATCACCTGAAGCAATTATTACCACCCACTCAAGACCAGTGGTCAAAGCTGTTGCTGAGGTATTTCCAAATACTCGTCACAGATACAATCTTTGGCATATCATGAAAGAGCTTCCTGAAATGTCTGGAAGAGTTGAGGATAAGGAGGCAATTAGCCTAAGAATGAAAAAGGTAGTCTTCGACACTATTACATCAACTGATTTTGAGAGGGAATGGGTTGAGATGGTCAATCAGTATAACCTTCATGATAATCATTGGCTTACAACCTTATTTGAAGAGAGGGCAAAATGGGTACCAGCATATGTCAAGGATACTTTCTGGGCTGGTATATCCACTGTTCGCCGCAGTGAGCGGTTGGAGGCCTTTTTTGATGGATACATTACACCAGAGACCACAATTAAGACATTTATTGAACAATTTGATACTGCTATGAAGCTTAGGTCTGACCGAGAAGCGTATGATGATTTTCGCTCATTTCAGCAAAGGCCTCAAGTCTTGTCTGGTCTACTCTTTGAGGAGCAATTTGCAAATGTTTATACAATAAATATGTTTCAGAAGTTCCAAGATCACTTGAAGCAGCTGATGAACGTGACTTGCACTGAAGTCAGTAGGAATGGATCAATAGTGACTTACACTGTGACCGTCATTGGTAAGGAGAGGAAGTATGACTACAAAGTGATGTATAACAGTGCTGAGAAAGAGGTGTGGTGTATCTGCAGGTCCTTCCAGTTTAAAGGTATTTTGTGTAGCCATGCTCTTGCTGTCTTGAGACAGGAACTTGTGATGCTGATACCTTATAAATATATTCTCGATCGCTGGAGGAAGGACTACAAATGCCCCGAGGAATCCAAGGAAACTCCCATCTCACCAAAAGCGATCAAAGCTACAGGGAAGGGCACAAAACCGGAAAATGCCCGTGAAGATAAAGTGGACAATCTGTACAAGCATGGTCACCAGTACTTTGCTGACATTGTGGAAATGGGAGCAACGGACCCTGATGCAATGGAGTATGTTTTGTCGGTCATGAAAGAAGCCAAAGAAAAGGTACGGAAGTTCGAGGAATCTCGGAAAGATAGAAGGCCTGGAGACAGTCCAGTTTCTACTGGTAAGAGAAATGGCAAGTCTTCAAGACCATCCAATGATGATGGGGGCAATGGCATATCAGATTCAACACCTGCGACTACAACAGTGCCGACAGTCGCGGTGGCCACATCTACAACAATGCAGGCAACGCCTACAATGGTGGCTATAGCGCCTACTTCGGCAACTGTGCCCGCCGGAATGTTTTTGGTACCAATGCACCCACATCCGATGGTTTTCCCACCTTTCACCCCTGCAGTACCACCAGTGGTAGCACCTGCAGTGCCACCTCCAGCACCAGCAGCCAATGTGGGTGATGTGGCTTCCAACTCCACAAGGAAGAGAAAGAAAAGAAAGGGGAACAAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016602