BGIOSGA016604

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Revision as of 04:32, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016604| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016604, complete gene.| tag = OS04G04...")
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Gene Name

BGIOSGA016604

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016604, complete gene.

LocusTag

OS04G0476700

Ensembl Transcript ID

BGIOSGA016604-TA

Ensembl Protein ID

BGIOSGA016604-PA

Length

2752

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22239488..22242239

Sequence Coding Region

22239488..22240189,22240357..22240393,22241349..22241514,22241591..22242239

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22239488..22242239 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22239488..22242239 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCCGGCGCCGCAGGCCCACCCCATCCTCTCCTACGTGCTCTCCCGCCTCCCCACCCTCGCCAAGGCCCGCCCGGCCGGCGGCGGCGGCGACTTCGACATCGAGCAGCCGCCCGTGCACACGCCGTCGCCGCGGACGCCCTCCACCGCGGGGGAGTTCGAGCTCGTGGAGCGTATGCCGGGGCTGCGCCACCCGTCCGTGCTCCGCGCCATGACCCGCGCCGTCGCCGACGTGTCGGCCGCGCGCTCCGCGCTCCAGGTCCTCGGCCCGCGGCCCGACCACGAGCTCGTCGACTCCTCCCGCGCGATCGTCGCCGCGACCGACGCCGAGGCCGGGGGCTCGCGGCGGGTCCCCGAGGGGGACCTCGAGGCCTGCCGCGCCGTGGTGCGGCTCGAGGAGACGCACGACGCCTACGAGGCGCTGCTGCAGGAGGCCGAGGGGAGGCTCGAGGCGGTGTACCGGTCGGCGATGGAGGGGAAGGACCTGGAGGAGCCCGACGGGAGGGACGAATCGGCGGCGGCAGCCGCCGGGGATGATGCTGCGGTGCAGGAGGAGGTGATCGCGGTGCTGAGGCAGGCCGAGGAGGGCAAGCCGGTGGAGAGCGTCCGCCTCGTGGACCGGCAGCTGCGCCACCTGCCGGAGGCGTTCGGGAGGATCCAGGGGCTCCGCGTGCTCGATGTCTCGCGCAATCAGCTCGAGATGATCAGAAATATAGGGCCATATGCAAAATGTGTACGTTATTCCAAATGCTATAGGAGACTTGATCATCTTGAAGAGCTTCGTCTTGCTTCCAATGCGTTGATTTCTCTTCCTGATTCCATTGGACTGCTATTGAATTTGAGGATTCTGAATGTGGGAAGCAACAGGCTAAGGTCATTGCCAGATAGCATCTCAAAGTGCAGGTCATTAATTGAGCTTGATGCGAGCTACAACGGGCTCGCTTATCTGCCAACCAACATTGGGTATGAGCTGGTAAATCTGCGGAAACTCTGGGTCCATATGAACAAGTTGCGGTCACTTCCATCATCTATCTGCGAGATGAGATCATTGTACCTCCTGGATGCACATTTCAATGAACTATGTGGTCTGCCATCTGCCATAGGGAAACTTTCAAGTCTTGAAATTCTGAACCTGAGCAGCAACTTTAGTGACCTGAAGGATCTCCCTGCTTCTTTCGGTGACCTGCTGAATCTGCGCGAGCTTGACCTCAGCAACAACCAGATCCATGCTCTTCCCGACAATTTTGGTCGGCTGGATAAGCTAGAGAAGCTCAACCTGGAGCAAAATCCCCTTTCTATGCCGCCAATGGAGATCGTGAACAAAGGCGTGGACGCGGTGAAAGAATACATGTTGCAGAGGTGGCTTGACATCTTGCTCGAGGAAGAACGGAAGAGCATCGCAGCAGCGGAGAGCCCTCAAGCACCGACCACTCCTTCGGCCTGGCTGGCACGCAGCGTCTCCTGGGTCTCCGACGTTTCCGGAAGCCTTGTGGGGTACCTCAGTGGCGAGAACAAGACGGAGAAAGATGCCTACCTGGATCAGCAGTACTGA</cdnaseq>

Protein Sequence

<aaseq>MDPAPQAHPILSYVLSRLPTLAKARPAGGGGDFDIEQPPVHTPSPRTPSTAGEFELVERMPGLRHPSVLRAMTRAVADVSAARSALQVLGPRPDHELVDSSRAIVAATDAEAGGSRRVPEGDLEACRAVVRLEETHDAYEALLQEAEGRLEAVYRSAMEGKDLEEPDGRDESAAAAAGDDAAVQEEVIAVLRQAEEGKPVESVRLVDRQLRHLPEAFGRIQGLRVLDVSRNQLEMIRNIGPYAKCVRYSKCYRRLDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLIELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKLNLEQNPLSMPPMEIVNKGVDAVKEYMLQRWLDILLEEERKSIAAAESPQAPTTPSAWLARSVSWVSDVSGSLVGYLSGENKTEKDAYLDQQY</aaseq>

Gene Sequence

<dnaseqindica>1..702#870..906#1862..2027#2104..2752#ATGGATCCGGCGCCGCAGGCCCACCCCATCCTCTCCTACGTGCTCTCCCGCCTCCCCACCCTCGCCAAGGCCCGCCCGGCCGGCGGCGGCGGCGACTTCGACATCGAGCAGCCGCCCGTGCACACGCCGTCGCCGCGGACGCCCTCCACCGCGGGGGAGTTCGAGCTCGTGGAGCGTATGCCGGGGCTGCGCCACCCGTCCGTGCTCCGCGCCATGACCCGCGCCGTCGCCGACGTGTCGGCCGCGCGCTCCGCGCTCCAGGTCCTCGGCCCGCGGCCCGACCACGAGCTCGTCGACTCCTCCCGCGCGATCGTCGCCGCGACCGACGCCGAGGCCGGGGGCTCGCGGCGGGTCCCCGAGGGGGACCTCGAGGCCTGCCGCGCCGTGGTGCGGCTCGAGGAGACGCACGACGCCTACGAGGCGCTGCTGCAGGAGGCCGAGGGGAGGCTCGAGGCGGTGTACCGGTCGGCGATGGAGGGGAAGGACCTGGAGGAGCCCGACGGGAGGGACGAATCGGCGGCGGCAGCCGCCGGGGATGATGCTGCGGTGCAGGAGGAGGTGATCGCGGTGCTGAGGCAGGCCGAGGAGGGCAAGCCGGTGGAGAGCGTCCGCCTCGTGGACCGGCAGCTGCGCCACCTGCCGGAGGCGTTCGGGAGGATCCAGGGGCTCCGCGTGCTCGATGTCTCGCGCAATCAGCTCGAGGTGAGAAATCTGTTATCTCCGCATGCTTTAGATCTGCTTGTTTAGAACCCTGTAACCCAAACAATGCTTGTACTGGGTTTTGTACGCATTTAGACATCTGAACGGATGGGATTTTTCTCTTCTGTACTGTGAAATTGTGAATTGATGGATTGAATCTTATGTTGAAGATGATCAGAAATATAGGGCCATATGCAAAATGTGTACGTGAGCGATAAAATGCCTGTTTTGTGGTGTTGCACACATTCTACCATTTGAACTGTATGCTGAAAATAGTTTGGGCACTGAATTTTCGGTAGGATTGTGTTTTTTGTGTGTGTGTGTTATGGTATGGGTCAGTTCCTATTATTTTTTTAAAGAGTCCTTCNNAAGGNNACGTGCGCANTGNTTANCNNTANTNNTTTCTTTATAGATTTACTAGTACAACTTATTTATTGGTGATGAAACAGTTACTATCTTAGGCCTTAGGATGTAAATAGTGAAACACTGTATGTTAGTATTTCTTTTTGCTGTTTTTATTTGATTACTAAATTAGGCTATGGGTGGATGAGTGCTGAAAGTTATGGATATAGTGACCCACTAGTCTTGTTTTAGAGTACTGAGAGTTAGCTGTTGACCATCTACAGTCTGAAACTCAGAATAACTGGATACTAGTATGTAGTAAGTATTGACAGAACAAATGTAGAACTGGTAGGAGCTTGGCGTGTATGTAAATTCCTGATTAGATTGTGGATTCACTTTCTAATATCATCCTGTATTTAATGGTTGGCTTGGATCATTGGAAAATCATAGGTAAGAGTAGGGAAGGCTGGCTTTGTTTTGAATTTTGGCCACTTCCTCTATATCCGTGTTTACATTGATGTTTAGAAATTTCTTAGTTTATTTTTGGGATATTAGGTTGTGCTCATTTGAGTTTAAAAATAGACAAACAATTAAGCACATACTAACTATAATTATTTTCTTTGATAAACCTTTATACTCAGTTATTTAACGATAGACATAACACAGTTAAGCGCGTACTAAATATAATTATTTTCTTTCATAACCCTTTTATCCTCAGTGGCTTGCCTGGTCATATTTCCATAGCGACATACTGTACACATTTTGTAAAGTATGTTGTTGTTGTGTCCCTTGCTTCATTGGTGAATCAATGTGATTTTAGGTTATTCCAAATGCTATAGGAGACTTGATCATCTTGAAGAGCTTCGTCTTGCTTCCAATGCGTTGATTTCTCTTCCTGATTCCATTGGACTGCTATTGAATTTGAGGATTCTGAATGTGGGAAGCAACAGGCTAAGGTCATTGCCAGATAGCATCTCAAAGTGCAGGTAGATAACTTTCTTTAGCTTAACTCTTGGGTTCAGCAAATGTTACTGTTCAAGTGACTGATTGGTGCAACTCCAGGTCATTAATTGAGCTTGATGCGAGCTACAACGGGCTCGCTTATCTGCCAACCAACATTGGGTATGAGCTGGTAAATCTGCGGAAACTCTGGGTCCATATGAACAAGTTGCGGTCACTTCCATCATCTATCTGCGAGATGAGATCATTGTACCTCCTGGATGCACATTTCAATGAACTATGTGGTCTGCCATCTGCCATAGGGAAACTTTCAAGTCTTGAAATTCTGAACCTGAGCAGCAACTTTAGTGACCTGAAGGATCTCCCTGCTTCTTTCGGTGACCTGCTGAATCTGCGCGAGCTTGACCTCAGCAACAACCAGATCCATGCTCTTCCCGACAATTTTGGTCGGCTGGATAAGCTAGAGAAGCTCAACCTGGAGCAAAATCCCCTTTCTATGCCGCCAATGGAGATCGTGAACAAAGGCGTGGACGCGGTGAAAGAATACATGTTGCAGAGGTGGCTTGACATCTTGCTCGAGGAAGAACGGAAGAGCATCGCAGCAGCGGAGAGCCCTCAAGCACCGACCACTCCTTCGGCCTGGCTGGCACGCAGCGTCTCCTGGGTCTCCGACGTTTCCGGAAGCCTTGTGGGGTACCTCAGTGGCGAGAACAAGACGGAGAAAGATGCCTACCTGGATCAGCAGTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016604