Os08g0111200

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Revision as of 12:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os08g0111200| Description = Protein of unknown function DUF608 domain containing protein| Version = NM_001067360.1 GI:115474456 GeneID:4344485| ...")
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Gene Name

Os08g0111200

Description

Protein of unknown function DUF608 domain containing protein

Version

NM_001067360.1 GI:115474456 GeneID:4344485

Length

6091 bp

Definition

Oryza sativa Japonica Group Os08g0111200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:579366..585456

Sequence Coding Region

579466..580551,581141..581538,581668..581729,581928..582000,582101..582171
,582308..582495,582577..582724,582948..583003,583092..583145
,583247..583350,583464..583564,583645..583715,583812..583911
,584073..584143,584259..584315,584653..584769,585000..585029

Expression

GEO Profiles:Os08g0111200

Genome Context

<gbrowseImage1> name=NC_008401:579366..585456 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:579366..585456 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaagttcagaattggaggaaaccaaggcagtcctgcacatggattgtgaaaagccaccagcaatatcttgggagaggacatttgatgatgaaggaaagaaggttgcaatgtttagcatgaccttgaatgacatgatggcaattgtgccgttgatgattaaaatgctgggactaaacctgaaagacaatgcaaaaggcctggcttcagtgtatgatccactgaagaaatggatggacaactgctaccgcggtgtacccctcggtgggattggtgcagggagcatagggagaagctacaggggatattttcagcagtttcagatattccccagtatatatgaagagaagcctatcctagcaaatcaattttcagcattcatttcgcgccctgacggaaagagatactcgacagtgttgtcggcaccgaatgccgatgtcctcaagggaatcgataaagctggcattggatcctgggactggaagctgaaagagaagaattgcacttaccatggcttgttcccaagatcatggacagtatacaatggtgaacctgaccctgaaattaaaataacttgccgtcagatatcaccgttcattcctcacaactacaaggagagcagcttccctgttgcagttttcacttttacgttacacaattctggaagcacacctgcagatgtaacactgctcttcacatgggcaaattcggttggagggaaatctgaactgaccgggaatcataagaactccagaatgacgacggcggatgggcgccctccggtgacgttcgcgatcgcgtcgcgggagaccgacggcgtccgcgtcaccggctgcccgcgcttcacgatgggaccatccaactccggcgatgtcacggcgaaggacatgtgggatcagatcaacaagaatggttcgttcgtcggggacggcaatgcggcggcggcggcgacgggagcgtcgaggcccgggtcgtccatcggagcggcggtggcggcgacgacgacggtggcggcgggtggcgcgcgcgcggtgtcgttcgcgctgtcgtggtcgtgccccgaggtgaagttcccggcggggagaacctaccacaggaggtacaccaagttccatggcaccgatcgcgacgcggctgctgagcgcctggcccacgatgctcttcttgaacacatgaaatgggagtcccagatcgaggagtggcagaggcctattctgcaggacaagagcctacctgaatggtatccaattacactgttcaacgagctctactacctcaacgctggaggcaccatttggacagatgggcagcctccgaagaacaccagcctttcgtcagcgactgagccgttcaacctcgacacgttcagtacagtcgccaacggcggcagcgcggtcgacggcattttgagcacggtggcggtggcggcggcgcggtcgaacacggcggcggcggcggcggcggcgatgggcacggcgctgctgcgcgacggcgaggagaacgtggggcaggtgctgtacctggaggggatggagtacaacatgtggaacacctacgacgtccacttctacgcctccttcgccctcctctccctcttccccgagctcgagctcaacctccagcgcgacttcgtccgcggcgtcctcctccacgacccctgcctccgccgcacccttgacggcgccaccgtggcgcgcaaggtgttgggagcggtgccacatgacatggggctgaacgacccgtggttcgaggtgaacgcgtacatgctgcacgacccggtgaggtggaaggacctcaacccaaagttcgtgctgcaggtgtaccgcgacgtggtggcgacggggaacgccggcttcgcggaggcggcgtggccggcggtgtacctggccatggcgtacatggaccagttcgaccgcgacggcgacgggatggtcgagaacgagggccgccccgaccagacctacgacctgtggtcggtgtccggcgtcagcgcctacaccggcggcctctgggtggcggcgctccaggccgccgcggccatggcgggcatcgtcggcgacggcgccgccgaggcctacttccgggggaggtaccaccgcgccaggcgcgtgtacacagacgagctctggaacggcggctacttcaactacgacaacagcggcggcgccaccagctcgtcgatccaggccgaccagctcgccggtcagtggtacgcgcgggcgtgcgggctggagccgatcgtggacggcgacaaggcgcggcgagcgctggcgacggtgctcgactacaacgtcatgcgggtgaagggcggcgccatcggcgccgtcaacgggatgcggccggacggcgccgtggacgcgtcgtcgacgcagtccaaggaggtgtggcccggggtgacgtacgccgtcgccgccgcgatgatccacgaggggatgccggaggcggcgttcaagacggccaagggcatccacgacgccggctggggcaagcacggcttcggctacgcgttccagacgccggagtcgtggacggccgacggcggctaccgggcgctgcactacatgcgcccgctcggcgtctgggcgatgcagtgggcgctgtcgccgccggtgctccacaaggagcacagggtggcggcggtggcggcctcgccggaggacgccgcactggggcaggagaagttcgacaaggtagcgagcatgctgaggctgcctgaggagcagcagcacaaggggatccttcgggcgctctatgatactcttcgccaattgctgctcccatcatga</cdnaseq>

Protein Sequence

<aaseq>MGSSELEETKAVLHMDCEKPPAISWERTFDDEGKKVAMFSMTLN DMMAIVPLMIKMLGLNLKDNAKGLASVYDPLKKWMDNCYRGVPLGGIGAGSIGRSYRG YFQQFQIFPSIYEEKPILANQFSAFISRPDGKRYSTVLSAPNADVLKGIDKAGIGSWD WKLKEKNCTYHGLFPRSWTVYNGEPDPEIKITCRQISPFIPHNYKESSFPVAVFTFTL HNSGSTPADVTLLFTWANSVGGKSELTGNHKNSRMTTADGRPPVTFAIASRETDGVRV TGCPRFTMGPSNSGDVTAKDMWDQINKNGSFVGDGNAAAAATGASRPGSSIGAAVAAT TTVAAGGARAVSFALSWSCPEVKFPAGRTYHRRYTKFHGTDRDAAAERLAHDALLEHM KWESQIEEWQRPILQDKSLPEWYPITLFNELYYLNAGGTIWTDGQPPKNTSLSSATEP FNLDTFSTVANGGSAVDGILSTVAVAAARSNTAAAAAAAMGTALLRDGEENVGQVLYL EGMEYNMWNTYDVHFYASFALLSLFPELELNLQRDFVRGVLLHDPCLRRTLDGATVAR KVLGAVPHDMGLNDPWFEVNAYMLHDPVRWKDLNPKFVLQVYRDVVATGNAGFAEAAW PAVYLAMAYMDQFDRDGDGMVENEGRPDQTYDLWSVSGVSAYTGGLWVAALQAAAAMA GIVGDGAAEAYFRGRYHRARRVYTDELWNGGYFNYDNSGGATSSSIQADQLAGQWYAR ACGLEPIVDGDKARRALATVLDYNVMRVKGGAIGAVNGMRPDGAVDASSTQSKEVWPG VTYAVAAAMIHEGMPEAAFKTAKGIHDAGWGKHGFGYAFQTPESWTADGGYRALHYMR PLGVWAMQWALSPPVLHKEHRVAAVAASPEDAALGQEKFDKVASMLRLPEEQQHKGIL RALYDTLRQLLLPS</aaseq>

Gene Sequence

<dnaseqindica>4906..5991#3919..4316#3728..3789#3457..3529#3286..3356#2962..3149#2733..2880#2454..2509#2312..2365#2107..2210#1893..1993#1742..1812#1546..1645#1314..1384#1142..1198#688..804#428..457#gtacagtttgttctgtatgtgagctttggctctgattgttttcttgtacagtttgcttaaactctctccttcttaatatatactccggccggctttcgaaaaaaaatcttagcatctgctgaatgagaagagcagtctaagtgtctagtgctgttcagattcaggtattactctcttcctcctcctcctccttagttgatacttgatagttctcggttagttttctgcagattcctgaaatgcatgctttgcattcagatacctgagtatttgtgttgtgctgtgttttttattgctgatttacattcagaaatcttgatatttgcttagtcatgttcttgacatctcgacaagtctttaaatttacatcttgtccttgtgcccatattagctgcccagccgcaatccaaccggagttcatatcaagatgggaagttcagaattggaggaaaccaaggtaccttctgaacctaacaaagagttgtggaaaaagtttttttttttttggaaaatggaacacgcaaatgatgtgctcctgtgtttagaagaactgttttcttcaccttggttctttggttccttgatttgtgccactatttatatggattgtatctgagcagtgtttcattatgttctttgttgagaaagttagccagtctcactctgaaagtactgttcttgctttaggcagtcctgcacatggattgtgaaaagccaccagcaatatcttgggagaggacatttgatgatgaaggaaagaaggttgcaatgtttagcatgaccttgaatgacatgatggcaattgtaagcatttgagcacacagtgcacctcttggttttctgctctgtaagatgcccaaatgaattggttgttcttcaaatttcaatattcaatactgtttgtcaaggaaaagtagtcctttcttttcagagaagagcaagaacactgttattattctaagaaaagttgttaaattaataacatgagcactaactttgtttaatattgttatttgtttcttttgcatatttagcaaaaagggcaacgacactcgttgctttcaagaaaagtagtctaaattaggtattagcagtgaagcattccatttgcaatgaagtcatggtgcttttggtattgtaggtgccgttgatgattaaaatgctgggactaaacctgaaagacaatgcaaaaggcctggtgattactcttaccctgttgaagatccagctaatccatcaataattgttttgcaggctgttgaaatatcagcaggaattgctaaacttactgacaatttttcacttttgcaaaggcttcagtgtatgatccactgaagaaatggatggacaactgctaccgcggtgtacccctcggtgggattgggtaagcaaattaagcctttcctactaaaaattcagctaagtttccttactatctacgattaggaactatatcaagatattctattaccttttggtcatagctaaatttgaattcattgaacaatagatgacaactttgttcaaagcacactgttttatcagtgcagggagcatagggagaagctacaggggatattttcagcagtttcagatattccccagtatatatgaagagaagcctatcctagcaaatcaattttcagttagtgcttttcattttgtatttctaatataaaatgaacattgatggtaatcctagaaatcctctaatcatcacgatcatggttcaattgtataggcattcatttcgcgccctgacggaaagagatactcgacagtgttgtcggcaccgaatgccgatgtcctcaagtaaacaacaaaatttatatcaaagcctatttgaatgcatctttgcatgctaggaatatcatgaaatgtgaaattttcaggggaatcgataaagctggcattggatcctgggactggaagctgaaagagaagaattgcacttaccatggcttgttcccaagatcatggacagtatacaatggtacacactgatttcttatagtagtatcactagaccattgatcacgaatcctggaaaaacatcaattgtgcaaatccttactaatctgagctctaaaattgcaaacaatgcaggtgaacctgaccctgaaattaaaataacttgccgtcagatatcaccgttcattcctcacaactacaaggagagcagcttccctgttgcagttttcacttttacggtacagttcttacaatcctttttgtttctgctgcagatgaaaataactccaattgatctgttcattttgttttctctgaacttctgttcctgtgcatgcagttacacaattctggaagcacacctgcagatgtaacactgctcttcacatgggcagtaagtgcaaaccaacacctagttcttcataaaacaaagacagcattttccagtaaaaacctcaccactggcattgttcatcatgcagaattcggttggagggaaatctgaactgaccgggaatcataagaactccagaatgacgtaattactgatcttgccatcatgtctctcaccaattttaatcagttaattcatggactcgttgcttcttgcaactgtgctgatctttcttgcgcagagctcgcgacggcgtccatggcgtcctcctccatcacaggtgcgtagttcatcacctcatcatgctctcgtgtcggaaactcttttgcaaatgagatgatgacatgtcgtcgatcgatggatgcaggacggcggatgggcgccctccggtgacgttcgcgatcgcgtcgcgggagaccgacggcgtccgcgtcaccggctgcccgcgcttcacgatgggaccatccaactccggcgatgtcacggcgaaggacatgtgggatcagatcaacaaggtacggaggacggacaccatgcatacgcttcactgtcagtctctgacaggctgacgaacactgcatgttcgcggcgaacagaatggttcgttcgtcggggacggcaatgcggcggcggcggcgacgggagcgtcgaggcccgggtcgtccatcggagcggcggtggcggcgacgacgacggtggcggcgggtggcgcgcgcgcggtgtcgttcgcgctgtcgtggtcgtgccccgaggtgaagttcccggcggggagaacctaccacaggtgaagtgacactgtgacagtgacacagctcatgctcatcagcagccagcaatggcgattctcttgttggttctttgctgtttctgaaattctcgaacactgacatgatgagatcgtctgatcatggctggagcaggaggtacaccaagttccatggcaccgatcgcgacgcggctgctgagcgcctggcccacgatgctcttcttggtgaagataacaaatttaatttctgaatttacgcaagagtcaggagtttgttgtctgaagattctgacgacgaatgtttggtgttcttgtctgcatgtagaacacatgaaatgggagtcccagatcgaggagtggcagaggcctattctgcaggacaagagcctacctgaatggtgatcgaatttttcagattttgcatatcaattactaatcactactccctcagtccaaaaaaactcaacctagtatttcgatgagacataatctagtacaacgaatctagacaaacttctaggttgagtttttttttacggagcaagtaattgactaattggattagtggtcgttgatggtaatgttgtttttgtcaggtatccaattacactgttcaacgagctctactacctcaacgctggaggcaccatttggacaggtcaatataatcttctgcacccaaattcttaaacatccattctgaaagtccaaaataacttgatcactgatctgaaacccaaaacgattcagaaacttgaaactgaccaagaaaacaaaattgtcacagatgggcagcctccgaagaacaccagcctttcgtcagcgactgagccgttcaacctcgacacgttcagtacagtcgccaacggcggcagcgcggtcgacggcattttgagcacggtggcggtggcggcggcgcggtcgaacacggcggcggcggcggcggcggcgatgggcacggcgctgctgcgcgacggcgaggagaacgtggggcaggtgctgtacctggaggggatggagtacaacatgtggaacacctacgacgtccacttctacgcctccttcgccctcctctccctcttccccgagctcgagctcaacctccagcgcgacttcgtccgcggcgtcctcctccacgacccctgcctccgccgcacccttgacggcgccaccgtggcgcgcaaggttcatacatcctctaccattcagtactccttccgtcccattttaagtgcagctgtggttttccgtattcaatgtttgagtcttagaaaaaattatgtgaataatatttttattgtttttagataataaaacataaacactaatcacatatttttttcaaataatacagatggtgaaatgttaaacacgaaaaaccacaattacacttaaaatgagacggagggacaagtattaagtttcatgcactgattagtaaaaatataaaaggttcatacttcctctaccatttagtagtattgagtttcatacaccgatgaataaaatatatacttcatccatttctaagactttatgttagaaagttttataatatgaaacgaagggagtatataaaaatacagtaattttaaggttttatgtatcgactaataagacatgaagttatacgtcggtattatgcttcatacgtcgatcaattaaacgtaaagagtatgttgtatattgagttatatgagtttatcggttaggcgtgaagagtacgttatattgagttgcatgcattgactagtttggggtgtcaaaaatgcaggtgttgggagcggtgccacatgacatggggctgaacgacccgtggttcgaggtgaacgcgtacatgctgcacgacccggtgaggtggaaggacctcaacccaaagttcgtgctgcaggtgtaccgcgacgtggtggcgacggggaacgccggcttcgcggaggcggcgtggccggcggtgtacctggccatggcgtacatggaccagttcgaccgcgacggcgacgggatggtcgagaacgagggccgccccgaccagacctacgacctgtggtcggtgtccggcgtcagcgcctacaccggcggcctctgggtggcggcgctccaggccgccgcggccatggcgggcatcgtcggcgacggcgccgccgaggcctacttccgggggaggtaccaccgcgccaggcgcgtgtacacagacgagctctggaacggcggctacttcaactacgacaacagcggcggcgccaccagctcgtcgatccaggccgaccagctcgccggtcagtggtacgcgcgggcgtgcgggctggagccgatcgtggacggcgacaaggcgcggcgagcgctggcgacggtgctcgactacaacgtcatgcgggtgaagggcggcgccatcggcgccgtcaacgggatgcggccggacggcgccgtggacgcgtcgtcgacgcagtccaaggaggtgtggcccggggtgacgtacgccgtcgccgccgcgatgatccacgaggggatgccggaggcggcgttcaagacggccaagggcatccacgacgccggctggggcaagcacggcttcggctacgcgttccagacgccggagtcgtggacggccgacggcggctaccgggcgctgcactacatgcgcccgctcggcgtctgggcgatgcagtgggcgctgtcgccgccggtgctccacaaggagcacagggtggcggcggtggcggcctcgccggaggacgccgcactggggcaggagaagttcgacaaggtagcgagcatgctgaggctgcctgaggagcagcagcacaaggggatccttcgggcgctctatgatactcttcgccaattgctgctcccatcatgatcatgagtcatcatgatcatgagtcataacaactgatgtaagattatcattgcaattgaattacaactggaatacgctttggttccagatttaattagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0111200, RefSeq:Os08g0111200