BGIOSGA016619

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Revision as of 04:32, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016619| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016619, complete gene.| tag = OsI_163...")
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Gene Name

BGIOSGA016619

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016619, complete gene.

LocusTag

OsI_16343

Ensembl Transcript ID

BGIOSGA016619-TA

Ensembl Protein ID

BGIOSGA016619-PA

Length

6139

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22471985..22478123

Sequence Coding Region

22471985..22472396,22472508..22472548,22476411..22476616,22477002..22477522,22477588..22478123

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22471985..22478123 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22471985..22478123 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCTCGTGGTGGTGTGGCTCGCCGCGGTGGCGGTTCTTGGTCTGGCCAGCCATGGGCGCCCCGCGGCGGCGGCGGCAGCGACGACGCTGTCGACGGCGTCGAGGTGGATCGTCGACGAGGGCGGGAACAGGGTGAAGCTGGCGTGCGTGAACTGGCCGTCGCACCTGGAGCCGATGCTGGCGGAAGGGCTGGGCAAGCAGCCTGTGGGCGCCATCGCCAAGGACGTGGTCGCCATGGGTTTCAACTGCGTCCGCCTCACCTGGGCCACGTTCATGGTGACCAACGCCTCCTACTCCTCCCTCACCGTCGCCCAGTCCTTCCAGCGCCTCAACCTCACCGAGTCCCTCGCCGCCATCCGCGTCAACAACCCCTCCCTCGTCGACCTCAAGCTCATCGACGCCTTCAAGGCGGTGGTGAGTACCCTGGGGGAGAACGGCGTGATGGTGATACTGGACGACCACGTGAGCAAGCCGGGGTGGTGCTGCGGCAACAACGACGGCAACGGCTTCTTCGGCGACGCCTACTTCGACCCGGACGTGTGGGTCGACGGCCTCACCAAGATGGCCACCATGTTCGCCGCCGTCCCCAGCGTCGTCGCCATGAGCCTCCGCAACGAGCTCCGGGGCCCCCGACAGAACTCCGCCGACTGGTACAAGTACATGCAGCGCGGGGCGGAGGCGGTGCACGCGGCGAACCCGCGCGTGGTGGTGATCCTGTCCGGCATGAGCTTCGACAACGACCTGGCGTTCCTCAACTCGCGGCAGGTGAACGTCAGCTTCGCCGGGAAGGTGGCGTTCGAGGTGCACTGGTACGGCTTCTCCGACGGGCAGGCGTGGCGGGCGGGGAACGCCAACCAGGTGTGCGCGCGGGTGGCGGCGAGCGTGTCGCGCCGCGCGCTGTACCTGCTCGACCAAGGGTGGCCGGTGTTCCTCAGCGAGTTCGGCGTCGACAACCGCGGCGGCAACGTCAACGACAACCGGTACTACGGCTGCGTCGCCGCCGTCGCCGCCGACCTCGACCTCGACTGGGCGCTCTGGACGCTGCAGGGGAGTTACTACCTCCGGGAGGGCGTCCTGGGCCTCGACGAGGTCTACGGCGTGCTCGACTGGGCGTGGTGCAAGCCCCGCAACGACACCGCCCTGACCAGGCTCCACGCCCTGCAGCGCCCCTTCAGAGGGCCTGGTCTGGCGGAGGCGGCGCCGTACACGGTGATGTTCCACCCGACGACGGGGCGGTGCGTGGTGCGGCGGTCGTCGTCGGTGGTGCAGACGACGCTGGAGCTGGGGTCCTGCGGCGAGGCGGAGGCGTGGGCGTACACGGCGAGCCAGCAGAGGCTGTCGCCGCGGGACAGCCCGCTGCTGTGCCTCCGCGCCGAGGGCGCCGGCCGGCCGGCGCGCCTCGGCCTGTCGTGCGGCGACGAGCTGGCGAGGTGGAGCCTCACCTCGGACTCCAAGCTGCACCTCGCCGTCAACGCCTCGTCGTCGTCGTCGTCCCCCGAGACCAGCAACGGCGGCATGCTCTGCCTGGACGTCGGCGACGATGGCCGGAGCTTGGTGACCAACCCGTGCCGGTGCCTGAGCGCGGACAACAGCTGCGACCCGGAGAGCCAGTGGTTCAAGCTGGTGACCAGCACGAGGAGCGTGGCGGCGACGAACACCATGCTCGCGCAGCTGCCGCCAAAGCTCAGGTCATGGAAGATTAGGTCCCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MRLVVVWLAAVAVLGLASHGRPAAAAAATTLSTASRWIVDEGGNRVKLACVNWPSHLEPMLAEGLGKQPVGAIAKDVVAMGFNCVRLTWATFMVTNASYSSLTVAQSFQRLNLTESLAAIRVNNPSLVDLKLIDAFKAVVSTLGENGVMVILDDHVSKPGWCCGNNDGNGFFGDAYFDPDVWVDGLTKMATMFAAVPSVVAMSLRNELRGPRQNSADWYKYMQRGAEAVHAANPRVVVILSGMSFDNDLAFLNSRQVNVSFAGKVAFEVHWYGFSDGQAWRAGNANQVCARVAASVSRRALYLLDQGWPVFLSEFGVDNRGGNVNDNRYYGCVAAVAADLDLDWALWTLQGSYYLREGVLGLDEVYGVLDWAWCKPRNDTALTRLHALQRPFRGPGLAEAAPYTVMFHPTTGRCVVRRSSSVVQTTLELGSCGEAEAWAYTASQQRLSPRDSPLLCLRAEGAGRPARLGLSCGDELARWSLTSDSKLHLAVNASSSSSSPETSNGGMLCLDVGDDGRSLVTNPCRCLSADNSCDPESQWFKLVTSTRSVAATNTMLAQLPPKLRSWKIRSL</aaseq>

Gene Sequence

<dnaseqindica>1..412#524..564#4427..4632#5018..5538#5604..6139#ATGAGGCTCGTGGTGGTGTGGCTCGCCGCGGTGGCGGTTCTTGGTCTGGCCAGCCATGGGCGCCCCGCGGCGGCGGCGGCAGCGACGACGCTGTCGACGGCGTCGAGGTGGATCGTCGACGAGGGCGGGAACAGGGTGAAGCTGGCGTGCGTGAACTGGCCGTCGCACCTGGAGCCGATGCTGGCGGAAGGGCTGGGCAAGCAGCCTGTGGGCGCCATCGCCAAGGACGTGGTCGCCATGGGTTTCAACTGCGTCCGCCTCACCTGGGCCACGTTCATGGTGACCAACGCCTCCTACTCCTCCCTCACCGTCGCCCAGTCCTTCCAGCGCCTCAACCTCACCGAGTCCCTCGCCGCCATCCGCGTCAACAACCCCTCCCTCGTCGACCTCAAGCTCATCGACGCCTTCAAGGCAAGATCATTGTTATCTACTACTTATTTTTGACAATGCGAGAGAGAGAGAGAGATTGACCGACGACGCGCGGCGCGGCGCGGCGTGGCGTGGCGTGGCGTGGCGTGCCAGCCGGTGGTGAGTACCCTGGGGGAGAACGGCGTGATGGTGATACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCAAGGAATCACCTCGACCTCGATGACCTCGTCGCCGGCATCGCCGCCGCCGCCGCCCCTCTCGCCCCGCCGGCTCCACACCAGCTTGAAGATGGCACGGATCAGATCCTGCCCCCAGATCCCCAAAACAAGCCCCGTCAACGTACCGCATCAACCCCAAAACTGGATTTATTCCGATCAAAAGGAGGGGGGAGCTCACCGGATCGAAGGTCTCGCCGCCGCGCGCCGCCTCGTCCTCCATCGCGGGTGGCTTCCGTTTCGCCCGGGCCGCGAGCGGGAAAACGCCGGGAGGGGGAGGGGATTAGGGCAAGTAAATGGCGGGAAGGGGTTTCAAGGTGGGCCTTGGTGGGCCCGTTTCAGGTGATCCCTTTACTGAATTGGGTTTTATTTTGGGCTATAAATTCTACTAATAGGCCTCTTCGAGCCTTTTCCCTCCATTTTCTCCCTTGCTAGCCGCCAAGCTGACGCGAGATGGTTTACCTTGCAGGAAAGGTAAAGCTTTTTTGGTTCATTTCTTTCTTTTTTGAATGGAAAAGCAAATTGTTGATTGAACTGGCAAGTCAATCACCAACTCGCCTAGACGATGGCTGCAAGTTTCCTCTGGTCATCCCATATCATGCTCGCATGTCGTAAAGGGGCTCGTATTTAATCTGTTTGAAGATGGCCAGCATTGCCCTGATTAACTTCAGGATTGTTTAATCTTGCGTGATTGAACATCCTTGGTATACTACTAATTTCGTGATTAAGCTGCCTGCTTGCTTCCTTAATGGCAGGTGAGTCAGGATGGTCGGAGAAAAGGCAGAGAACGACCTTTTCAGGGGACTATCATCGCCGTGAACGAACTCCTCCCCTTTGAAGGAGCAAAACTGTTCTAAATCATCTGCTTCCCCTTTCCCTGTTTCCCACCGCTTTTCAGTTTCTCTCGCCAACTTCTGAAGATTGTTTAAGAAACCTTGCGTCCTTCCTCGTTTTCTTTTCCTTTTTTTTCTTTGGTGTGGAGGGTTTCATTAAAGAATGAAACTTTCCTGGAGTCAAAAGTCCAAACAAATTATGTACTATACATNGTTCACTGTTCAGAAACCACTTCCCCCAAACCGTGCGAACTCTCTCTCTCTCTTGTGATTTCTAAAAGCCATTCGTCTCCATGCTTGCAAATAGCGATCACTATTTCGAGTGCATTTTGGTTTGGACTTTGGAGATACTACATGACAACTTGACAAGCAGAACAGGTAGCTTAGACTGCATCCATTTCGCAGGTCAGATCTTCTCCTTGATCGTTTTGCGAGATCCGAACAACAGCGTGCCATGCCCATGCGTCCATATGCGTTCGACTTAAGCATAGGGCCCCTCTCTTATCCTATCAATATCATCATCGTCTTCTTCGTCGTCGTCATGGGGCCTCCTCTCCTTCTCCCCTTGTCTGCTTCCTGGGGCAGGGCTAGCACTGGTGACAGTTGACCAAACGCGATCGATCGCTTCAATTCTTTAATGACTTTTTCTTCTTCTTCTCCCGTCGCCTAGCTACTGCAGGAGCATGATCTGTTTCTGTGGGTGACGGTTCTGGAAGCGGAATATCTGGCCGGCTCGCTCCATCCAATCATGGGGCTTGGCGGGTGGAAGCTTCTGTGCCAATGTCTGTTAGACTGTCACGCCGTGGACCTGCTGAAAAATGCAGCGTGCAGGGGGTGAGGAGAGGCGTGCACCGACCGCCACCGCCACGCGTACGGCTCGGATTTGTTTGGTTCATCGCCACAATATAGATCCGTCCATCAAGGTACAATCAGAAATTGGACAGGAGCTCTACTGCCAATTCAGCAGCTTTGGCCCCGCCGGTATAGATTATTTGTCACAGAATGGTGTCCGCATTTTTTTTTATATGTAAGTTTCTTAGAAATAGTATTTAAAATATCAACTTTGTGCTGCTTAATTATTTTCTTTTTGTACCCTTGAAATATTATCATAAAATCAATTCAGAGTCTTGCTCCGCAAAAATACCAGATGAGCATGAGCTGATCAATTCCAGCGCCGCAGCCGCAGCAAAGAGTGCAAGACAATCGATCAGGCCAAGAGGCACCAACCGTGTGTAGGGGACAAACCAAAAACGAGTAAGGGGGTGTTCAGATCTAGGGGTGTAAAGTTTTAGCGTGTCACATCGATTATTATATAGGTGTCGCATGGAGTGTTCGGGCACTAATAAAAAAACTAATTACAGAATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTAGCTCCGCCCGTAGTTTTTTAGATTTTAGGACTACGGACTGAGTATTATTTGCCATCACATCACGTCGCATGCTTAATCTCTGTGTTCGTTGTGAGCTGTGACAATACTCAATAGGATGTCCATTGTTGGAGTAGCTCACTGTGCTGACTTGTGAGCAGCTAGGTACTGTGCCGACTTGCTAGTTGATCCATTTGCTGTGTTGACGAAGCTAACAATGCCAGAATATTCCAAGACTTAATAGGCTCCATGTGCCACACTGTATACAAGTACACTACACGTCAATTCATACACTAGTATATATGTACTAGTAAGATGGAAACAAAATGCACAATCTCAGTGTACGAGTAGTAAATACTAGTGTAATACGTGGTGCCTCGTTCATGCACCTAAAACTTCCTCCCGTTGATTGAAAATTTGAAACTATGGGTGGCAGAACAATGGTTTTGCCACTTGTTTATGACATACTCCTACCCTACCTGATCCATGGCATTTCTTTGTACTAACCAGGTTATTCCAGCCTGCCACGCTGACTTACACTTGGACGATACAGTCAGCTGCATCATCTTTTCACATTGTCACATTTGCTGGTCAAATACTCCACGATGAGGACCTCTCCTGAAATATTTCTATACACGACCTGCATAATCAGGGGACGTGCCAATGCACGCACCACCAGTTGAATCCCACATTAACAATCCATTCCCTTACAAAAAAAGTAAAAAAAAAAAGAATGAATCTCCTCCTAACCTGCTGCTAGTATCCCACCAGCTACATAAATTGCATTTGACTCCTCGAGCTAGCGAAGCCTACCTACGTGGCTACGTGATTAAAAGAAGATGGCGGCGCGCTGAGGCAGACGTGAGTCAGTGTCGCGATTAACTAATCGGTCGAGATCGAGCTGCTGCTCCTCCGCCACCACCGCGCGCCAACGCTGCCGGATCATTAGCGCGACTCGCGCTGACTCGTTGCTCCTTTCATCTTAAAATATAAAAAGTTTTAATTGGATGTAACATAGTACTCGATATTCACACTCATCATCAAATAAAAAAAATATTGATTCAATGTAACAGATTTATTGTTTAAGTTTATAATACTAGATATATCACATATTCACGTCGGGTCAAAGTTACTTATTATAAAATACAGGGAATAATTCATTCTACCTTACTCTCACGCCTGTCATCATGTACTAGCAGTGTAGCTAGGATTTATCAAACCGTGTGATGGTTTAAAAACTGAAAAAAAAAACATCACATATGATAACCATAGTGACTGTATGATTTTGTAAACCCTGGATGTAGCTCGCTCCACGCACGCCTCGCGCCACCGGGCGAATCAACTGCGAGGCTCGTGTTATCTGCGACCGCGCGCCAAGTGGGATTACTTTACACTGATTTTTAAATCCTCAAGGGTGATGTGTACAGATATACTACTGCTACAACATGGGTTGATTAAGCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGGGGAGAACGGCGTGATGGTGATCCTGGACGACCACGTGAGCAAGCCGGGGTGGTGCTGCGGCAACAACGACGGCAACGGCTTCTTCGGCGACGCCTACTTCGACCCGGACGTGTGGGTCGACGGCCTCACCAAGATGGCCACCATGTTCGCCGCCGTCCCCAGCGTCGTCGCCATGAGCCTCCGCAACGAGCTCCGGGGCCCCCGACAGAACTCCGCCGACTGGTACAAGTAAGTCACCAGTTCACCACCCATTTGCTCGATCGATCTTCCTCATCAATTTGCACACCGACCGCCATGATTAGCATCTGTATCCAAGAACCACGCATTGCTCATCGTCGGCCATGTCCTGGATCGATCAGTAAATGAACCTGAAGCTAGTGGTGGTTGGCAGCTGAGCTGACTGACCGCGTCCGCCATTGCTCGTCCCTGCACAAGCATGTGAAGAACAGTAATGGCAATAATCTGATGCAGTAGCAGTTCGCATCATTCATTTCAGTGTACTGTGTACTAGCGCCATCTGCAAAAAATAAAAATAAAAAATGGCGCCAACGATGTAGCGGCTGAGCTGATAGCTGACGAGTGCGCGGGAAAAAAATGGCGTGCGTGCATGCAGGTACATGCAGCGCGGGGCGGAGGCGGTGCACGCGGCGAACCCGCGCGTGGTGGTGATCCTGTCCGGCATGAGCTTCGACAACGACCTGGCGTTCCTCAACTCGCGGCAGGTGAACGTCAGCTTCGCCGGGAAGGTGGCGTTCGAGGTGCACTGGTACGGCTTCTCCGACGGGCAGGCGTGGCGGGCGGGGAACGCCAACCAGGTGTGCGCGCGGGTGGCGGCGAGCGTGTCGCGCCGCGCGCTGTACCTGCTCGACCAAGGGTGGCCGGTGTTCCTCAGCGAGTTCGGCGTCGACAACCGCGGCGGCAACGTCAACGACAACCGGTACTACGGCTGCGTCGCCGCCGTCGCCGCCGACCTCGACCTCGACTGGGCGCTCTGGACGCTGCAGGGGAGTTACTACCTCCGGGAGGGCGTCCTGGGCCTCGACGAGGTCTACGGCGTGCTCGACTGGGCGTGGTGCAAGCCCCGCAACGACACCGCCCTGACCAGGCTCCACGCCCTGCAGCGCCCCTTCAGAGGTAGGTTCGTTGCCGCGCCGCGGTATCTATCTTCTCCGGCGATGACTTTGGTTTGGCGTGTGCAGGGCCTGGTCTGGCGGAGGCGGCGCCGTACACGGTGATGTTCCACCCGACGACGGGGCGGTGCGTGGTGCGGCGGTCGTCGTCGGTGGTGCAGACGACGCTGGAGCTGGGGTCCTGCGGCGAGGCGGAGGCGTGGGCGTACACGGCGAGCCAGCAGAGGCTGTCGCCGCGGGACAGCCCGCTGCTGTGCCTCCGCGCCGAGGGCGCCGGCCGGCCGGCGCGCCTCGGCCTGTCGTGCGGCGACGAGCTGGCGAGGTGGAGCCTCACCTCGGACTCCAAGCTGCACCTCGCCGTCAACGCCTCGTCGTCGTCGTCGTCCCCCGAGACCAGCAACGGCGGCATGCTCTGCCTGGACGTCGGCGACGATGGCCGGAGCTTGGTGACCAACCCGTGCCGGTGCCTGAGCGCGGACAACAGCTGCGACCCGGAGAGCCAGTGGTTCAAGCTGGTGACCAGCACGAGGAGCGTGGCGGCGACGAACACCATGCTCGCGCAGCTGCCGCCAAAGCTCAGGTCATGGAAGATTAGGTCCCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016619