BGIOSGA016624

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Revision as of 04:32, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016624| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016624, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA016624

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016624, complete gene.

LocusTag

OSJNBA0081L15.3

Ensembl Transcript ID

BGIOSGA016624-TA

Ensembl Protein ID

BGIOSGA016624-PA

Length

3544

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22567091..22570634

Sequence Coding Region

22567091..22567184,22567871..22567979,22568073..22568265,22568339..22568475,22568807..22569095
,22569219..22569325,22569401..22569548,22569756..22569954,22570042..22570282
,22570385..22570634

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22567091..22570634 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22567091..22570634 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCCACCAAGTGGGTTCTGGGCCTCCCTGGGGAGCTTCCTCAAGTTCTTGCCCTACTTCTGCGGCCTCCTCATCCTGGGGGTCATCAAAGGTATTTTGATATGCCCTTGGGCATGCCTTATTATGGCAATTGGATTATCTGCGCTAATCCTGGGCTTATGGCCCATGCATGTGATTTGGACTTACTACTGCATTATCAGAACTAAGCTGGTAGGACCTGTAGTAAAGCTTCTGCTCCTTATTGCTGCCACTGCAACCTTAATCTTATGGTTGATAGTTGGCATCCCTGGAAGCATCTTAGCTGGATTGGTGTATGGCTTTCTAGCACCGATAATGGCAACATTTGGTGCGGTTGGAAAAGGAAAAGAAAAGCCGTTTGTTCATTGTTTTGTGGATGGAACGTGGAGTACTATCACTGGGAGCTGTACGATAGTCAGGGACGTGAAAGACCTGCTTTTCCACTCCTATTTTTCTATTATGGACGATCTTCGTCTTCAGGCACCTCCTGATAACAAGCCATATGAGATAAGATTGCTCGATATTCCTGGTGCTTTATTATCTGCTGCATGTGGACTCATACTGGATGGTATAATGTTCACGCTGATTGCCATCTACAAATGCCCTGTGATGCTTTTCAAAGGATGGAAACGACTGATTCAGGATATGATTGGGAGAGAGGGACCTTTTCTGGAGACAGCTTGTGTGCCGTTCGCAGGTCTTGCTATTCTTCTCTGGCCATTTGCCGTAGTGGGAGCTGTTCTCGCCTCCATCCTATCCAGTATTCCTTTAGGCGCATTTGGTGCAGTCGTGGCTTATCAGGAATCCTCCCTAAAGATGGGCTTATCTTATGTTGTCTCATCTGTGTCCATCTTTGATGAATACACAAATGATGTGCTTGACATGGCACCGGGATCTTGTTTTCCGAGGTTGAAATATAGGAAGAGAGAAGATTCTTCACATGGAGGTAGCTTATCCAGGCCAACCTCATTCAACAAAGAAAAGCAAGAGGGAAAGAAACCTCCAGCACGTGTTACATCTTTTAAGAACAGTATTGAAGACTTCAATCCATTCAAGTTGCTAGAACACCTATTTGTCGAATGCAAGCACCAAGGGGAGACTTTGGTTAATGAAGGAGTCATAACAATGAAAGATATCGAAGAGACAAAGTCGGGAAAAGTTGGCACTGGAGTTCTTAATGTTGGTTTACCAGCATATGTAATCCTTAATGCACTCCTTCGGTCCGCAAAAGCTAATTCTGTTGGCCTACTCTTAAGTGATGGCTCTGAGATTACATCTGACAATAGGCCTAAACATACACTCTATGAATGGTTCTTTGACCCTCTTTTGGTCATCAAAGAACAAATTAAAGCCGAGAATTTTACAGAAGAGGAGGAAAAATATCTCAAAATGCGAGTTTTGTTGATTGGTGGCCCTGATCGCGTCAAGGGCAGTCTTCCCGATGTGCCATCACTGGATGAGCGAAAAAAGGCCGAAATAGACGCATTTGCTCGCAGACTGCAAGGGATCACAAAGTCGATATCAAGATACCCTACCGCGAAGCGACGCTTCGATATTCTTGTCAAGCAGCTCTTGTCTGAGCTTGAGAGGACGGTGGGTGGCGGTCAATCGACCAATGGGTCCCAATCTCAAAGCTTGAGAGGCGGCATTGCCAGAATGCTCAGCCAGAAGTCCATGGGGAAGGCGGCAAACGTCAGAGATGAAGATCCAGAAGCGCAAATGACAAGCCATGATCGCACTCCGTGA</cdnaseq>

Protein Sequence

<aaseq>MEPPSGFWASLGSFLKFLPYFCGLLILGVIKGILICPWACLIMAIGLSALILGLWPMHVIWTYYCIIRTKLVGPVVKLLLLIAATATLILWLIVGIPGSILAGLVYGFLAPIMATFGAVGKGKEKPFVHCFVDGTWSTITGSCTIVRDVKDLLFHSYFSIMDDLRLQAPPDNKPYEIRLLDIPGALLSAACGLILDGIMFTLIAIYKCPVMLFKGWKRLIQDMIGREGPFLETACVPFAGLAILLWPFAVVGAVLASILSSIPLGAFGAVVAYQESSLKMGLSYVVSSVSIFDEYTNDVLDMAPGSCFPRLKYRKREDSSHGGSLSRPTSFNKEKQEGKKPPARVTSFKNSIEDFNPFKLLEHLFVECKHQGETLVNEGVITMKDIEETKSGKVGTGVLNVGLPAYVILNALLRSAKANSVGLLLSDGSEITSDNRPKHTLYEWFFDPLLVIKEQIKAENFTEEEEKYLKMRVLLIGGPDRVKGSLPDVPSLDERKKAEIDAFARRLQGITKSISRYPTAKRRFDILVKQLLSELERTVGGGQSTNGSQSQSLRGGIARMLSQKSMGKAANVRDEDPEAQMTSHDRTP</aaseq>

Gene Sequence

<dnaseqindica>1..94#781..889#983..1175#1249..1385#1717..2005#2129..2235#2311..2458#2666..2864#2952..3192#3295..3544#ATGGAGCCACCAAGTGGGTTCTGGGCCTCCCTGGGGAGCTTCCTCAAGTTCTTGCCCTACTTCTGCGGCCTCCTCATCCTGGGGGTCATCAAAGGTGGCTTGCTGGTCTTCTGTCTCTGTCCATTTTGGTAATTTTTGAACTGATTCCATGTGTGTTAAGTCTCATTTGGGAATAATTGTGTGTGTGTGTTTTGGGGGGGGGGGGGGGGGGGGAGGGCCATGAGTGCAACCATTGTGCATTTTCTTGGCCTTATGAGGTTGCTTTATGTTGGTCTCTGTTCTGCTTTTATGGATCAGATGCTTGATTCTGCTCTTTCTTGGAGCATCTAGTTAGAGATCAGCAACAATAATCATTTTACAATTTACCAACCATCGACAGGAAGCTGTTCTGACTTTAGTTGTGATAGAATCAAATTAATTTGACTTGGCTTGGAGTAGTATTTGTAAAATGAGCAGTTATTTGATCAAATTGCTGAATGGCGTGGTTTCAATTAATCATGTCAATTTAACCGTAACTATAGATATTCTATTGTTCGAAAATTTTGGCTGGATTTGCTACAATTGGTAGCTTTGCATGCATTATGATTGCTAGAAGGAAAAAATAGAAAAAAACAAATTTACATTAGTTTTTGCTGTTACCTAGTTACATGATAAAAAAAATACAATGCTGCTCTGTTGTTACCTACTTACATATCGTCAGCTATTGGCGTGTTCATCTTTGTTTTGATTATCTTAAAATTTGATGTACTATCCTCATTTCACATTATTTTTGTCTGCAAGGTATTTTGATATGCCCTTGGGCATGCCTTATTATGGCAATTGGATTATCTGCGCTAATCCTGGGCTTATGGCCCATGCATGTGATTTGGACTTACTACTGCATTATCAGGTACAGTTTGCATATTCTTCCCCTGTATTTTAGCCGTCTCATGTAATTAATCAGGATATTACTCATATTTTGTGTCCTTTTCCTTGAAGACAGAACTAAGCTGGTAGGACCTGTAGTAAAGCTTCTGCTCCTTATTGCTGCCACTGCAACCTTAATCTTATGGTTGATAGTTGGCATCCCTGGAAGCATCTTAGCTGGATTGGTGTATGGCTTTCTAGCACCGATAATGGCAACATTTGGTGCGGTTGGAAAAGGAAAAGAAAAGCCGTTTGTTCATTGTTTTGTGGTAGAATTTTTCTTTCTCCATGTTCATTTTTACAAACTTTTATTTTTCATGTGCTAATTATCTCAAATTGCAGGATGGAACGTGGAGTACTATCACTGGGAGCTGTACGATAGTCAGGGACGTGAAAGACCTGCTTTTCCACTCCTATTTTTCTATTATGGACGATCTTCGTCTTCAGGCACCTCCTGATAACAAGCCATATGAGATAAGGTATGCTTCCGGTTCTTGTTTAGTATTTTACCATCACAACTCATAATCGCCAACCTTTCTGGATCATCTTTCCTCCTCCTCTTTCCTCCTTATCTTATGGACCTAAGCTTAATATGCAAGTAACACTCTTTCTACTTGACTTAAGATAACATTCCCAAAGCCAAAAAAGCATTTCAGACATTCCTCTAAGCTTTTAAGGTGAAAGTATCCCCAAATGCTATGCCATTTTCAGGGAAACATGATGCTATACATGTAGGTGGCATTTTTATGAATAATATTTTTGTTGTGTGAGGAATTATGATATATAAAATGAGGAACATTTGTCTTACAGATTGCTCGATATTCCTGGTGCTTTATTATCTGCTGCATGTGGACTCATACTGGATGGTATAATGTTCACGCTGATTGCCATCTACAAATGCCCTGTGATGCTTTTCAAAGGATGGAAACGACTGATTCAGGATATGATTGGGAGAGAGGGACCTTTTCTGGAGACAGCTTGTGTGCCGTTCGCAGGTCTTGCTATTCTTCTCTGGCCATTTGCCGTAGTGGGAGCTGTTCTCGCCTCCATCCTATCCAGTATTCCTTTAGGCGCATTTGGTGCAGTCGTGGCTTATCAGGTATGACCATATGGCTAGACTTTCCCTTTTCAAGTATGCTGATGTCACTGTATTTTTCATGGTAACTTAAAGAAAATATTTAGCTTATGTTAGTGATGGAACTTACTCTTGTTGATATATTAGGAATCCTCCCTAAAGATGGGCTTATCTTATGTTGTCTCATCTGTGTCCATCTTTGATGAATACACAAATGATGTGCTTGACATGGCACCGGGATCTTGTTTTCCGAGGTATAACCAACCATAAGCCTTTAGTCCATATCCTAAATAATTGAAGTTTGTGGTTCTGATGTTTGAACACTTTAGGTTGAAATATAGGAAGAGAGAAGATTCTTCACATGGAGGTAGCTTATCCAGGCCAACCTCATTCAACAAAGAAAAGCAAGAGGGAAAGAAACCTCCAGCACGTGTTACATCTTTTAAGAACAGTATTGAAGACTTCAATCCATTCAAGGTGATCTTTTGGTGCTATTCATTAGCAGATCAATTTGGTAAATTGTAATGACTATGCTTATTGGTGTTGCGGTTTCTGAACCCAAATTACCTTTTGCAATGCCTGAAATAGGTCATTCGATCTTTTAACTTTCAATGATCAATGCATCCTGCAAATATTTGAACTTATGGAATATGGACATTTTAACTGAACGGTTCCACTCTGCAGTTGCTAGAACACCTATTTGTCGAATGCAAGCACCAAGGGGAGACTTTGGTTAATGAAGGAGTCATAACAATGAAAGATATCGAAGAGACAAAGTCGGGAAAAGTTGGCACTGGAGTTCTTAATGTTGGTTTACCAGCATATGTAATCCTTAATGCACTCCTTCGGTCCGCAAAAGCTAATTCTGTTGGCCTACTCTTAAGTAAGTGCAGCAAAGAAAATTGATTTTCTTCCATTGAGAGGGATGTGTTATGCCCTTGACTCTGATTTTCTTTGAAAAAACTTGCAGGTGATGGCTCTGAGATTACATCTGACAATAGGCCTAAACATACACTCTATGAATGGTTCTTTGACCCTCTTTTGGTCATCAAAGAACAAATTAAAGCCGAGAATTTTACAGAAGAGGAGGAAAAATATCTCAAAATGCGAGTTTTGTTGATTGGTGGCCCTGATCGCGTCAAGGGCAGTCTTCCCGATGTGCCATCACTGGATGAGCGAAAAAAGGCCGAAATAGACGCATTTGCTCGCAGGTACTCCACTCCCCTTCACCCTCTGAATCTCTGATCCGATGCATGCCATATAACCATGATTGATGTTCCCTGATTCTTCTGCTCCTACTCTTTTGCTTCAAGACTGCAAGGGATCACAAAGTCGATATCAAGATACCCTACCGCGAAGCGACGCTTCGATATTCTTGTCAAGCAGCTCTTGTCTGAGCTTGAGAGGACGGTGGGTGGCGGTCAATCGACCAATGGGTCCCAATCTCAAAGCTTGAGAGGCGGCATTGCCAGAATGCTCAGCCAGAAGTCCATGGGGAAGGCGGCAAACGTCAGAGATGAAGATCCAGAAGCGCAAATGACAAGCCATGATCGCACTCCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016624