BGIOSGA016627

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Revision as of 04:32, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016627| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016627, complete gene.| tag = H0805A0...")
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Gene Name

BGIOSGA016627

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016627, complete gene.

LocusTag

H0805A05.8

Ensembl Transcript ID

BGIOSGA016627-TA

Ensembl Protein ID

BGIOSGA016627-PA

Length

2189

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:22632701..22634889

Sequence Coding Region

22632701..22632730,22632944..22633831,22633917..22634069,22634347..22634514,22634707..22634889

Genome Context

<gbrowseImage1> name=IndicaChromosome04:22632701..22634889 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:22632701..22634889 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATCAAACGGCACCAGCGTGGCAGAGGGTGACAAAGCTAATCAAGAAGACAGGCTCAGTGCACTTCCCGACGACATTTTGATTCATATATTGGATAGACTCAAAACACGTGATGCTGTGAGGACTAGTGTCCTCTCAAGACGGTGGAGGCATCTCCCTGGCGTCCTGTCTAAGATCATTCTCCATGTTGGATCATTTAAGCCTAAGGATGGTTCCATGCTAGCCAAAGACGATTTGAGAATAAGAAGCAACATCTCTGTCATCGAAGCAACCCAAAGTATTCTAGCACATAAAAGTCAGTGCAAAATTAATTTTTTGAGCGTGGGATTCTATTTGAGGGAGGAATCTATCAGCATCGCCCACTCCATCAATGATGCCATGGCAAATAGAGAAATCGTCAGTACGAAGTTTATGATTTTGCCAGAAAAACATGGAATACAACGGATGGAAGATGACAAGATCATATGTGGAAAACGTTTCATGTCATTCTCTTATGCTTGCCCCCGTGCATTTGGTTGCCTCAAGCAACTAATCTTAACCTGTGTGAGGCTAGGTAACTCAGACTTCACTGATGTGCTTAGCACATGCAAGAAGCTAGAATACCTCCAACTAATAAGCTGTGACTTTCAGCCATCAGTATTGCAAATGGAACACCCGACGCTTATTAAAATGGAGCTTGTGGTGTGCACATTTGGAAGTGTCGATCTTAAATCTCTTCCGAAACTAAGAACATTGATTGTTGACACGTGGATGGGTTTGGAGGAAATTTATCCGCTATCATTTGGTTATGTTCCACAACTTTCGACCCTAAAGCTAACTTATAAAGGCACAACTCGGGACAAGAATATCAAGCTAAGTGAGTTTCTTGGTAATGCGGCTATAGGCGCACTGCATCTGGATTTTGAATGTGGAAGGATTTGGATTCAACCGGAACATCCGAAACTATTGGCTCCTGTGTTGCGGAATCTGCAGATTGCTAGTCTTACTTGCATTCATGAAGAGTGCAACCTTACTTGGATATTTTTTCTTTTAGAAGCTGCGCCTCTATTGGAAACCATGCACATAAAGATGTGGGACCATGAATGCAAAACGAGTGAGGATGAGGAACTATACCAAAAGGAAGGTGATAAATTATTGAAGTGGGAATCATCTCGTGATTTTAAGCATCAAAATTTGAATGTTCTCAGAATTGTGGGCTTTCAAGTTGACGAGAAGTTTATGACGTACATAAGACGGTATTATTCTTTGAAAGTGTTTCTTGCAAAGGCTGTCAATTTTGTCCCTCGACGAGATATCCATACACCAATTGAGGAAAAGGTTATGACAGTGAAACAGATTTGTGAGGGGAGATATGACAGTGAAAAGGGGAGATCTTTGCCGATTAAATTTTGTTTTGGCCATGTAAGGCCATGTAATTGA</cdnaseq>

Protein Sequence

<aaseq>MASNGTSVAEGDKANQEDRLSALPDDILIHILDRLKTRDAVRTSVLSRRWRHLPGVLSKIILHVGSFKPKDGSMLAKDDLRIRSNISVIEATQSILAHKSQCKINFLSVGFYLREESISIAHSINDAMANREIVSTKFMILPEKHGIQRMEDDKIICGKRFMSFSYACPRAFGCLKQLILTCVRLGNSDFTDVLSTCKKLEYLQLISCDFQPSVLQMEHPTLIKMELVVCTFGSVDLKSLPKLRTLIVDTWMGLEEIYPLSFGYVPQLSTLKLTYKGTTRDKNIKLSEFLGNAAIGALHLDFECGRIWIQPEHPKLLAPVLRNLQIASLTCIHEECNLTWIFFLLEAAPLLETMHIKMWDHECKTSEDEELYQKEGDKLLKWESSRDFKHQNLNVLRIVGFQVDEKFMTYIRRYYSLKVFLAKAVNFVPRRDIHTPIEEKVMTVKQICEGRYDSEKGRSLPIKFCFGHVRPCN</aaseq>

Gene Sequence

<dnaseqindica>1..30#244..1131#1217..1369#1647..1814#2007..2189#ATGGCATCAAACGGCACCAGCGTGGCAGAGGTAACTACACTAAGAGCAGCATTTCCTCGTCTTCCATGTGTTCCTATTTATGTGTGTGTTTTTTTTACCTTTTTTTATTATTTATGAGTATTAAGGTTTGGTTTACATATTCCTCGAGAAAAGAAGGAATGTTTATTCCTTATGAGATATTAATGTCACTTATGAGTGCCTACAAAAGTGCAGAAATACTTATTATGTATAATACTAATGCAGGGTGACAAAGCTAATCAAGAAGACAGGCTCAGTGCACTTCCCGACGACATTTTGATTCATATATTGGATAGACTCAAAACACGTGATGCTGTGAGGACTAGTGTCCTCTCAAGACGGTGGAGGCATCTCCCTGGCGTCCTGTCTAAGATCATTCTCCATGTTGGATCATTTAAGCCTAAGGATGGTTCCATGCTAGCCAAAGACGATTTGAGAATAAGAAGCAACATCTCTGTCATCGAAGCAACCCAAAGTATTCTAGCACATAAAAGTCAGTGCAAAATTAATTTTTTGAGCGTGGGATTCTATTTGAGGGAGGAATCTATCAGCATCGCCCACTCCATCAATGATGCCATGGCAAATAGAGAAATCGTCAGTACGAAGTTTATGATTTTGCCAGAAAAACATGGAATACAACGGATGGAAGATGACAAGATCATATGTGGAAAACGTTTCATGTCATTCTCTTATGCTTGCCCCCGTGCATTTGGTTGCCTCAAGCAACTAATCTTAACCTGTGTGAGGCTAGGTAACTCAGACTTCACTGATGTGCTTAGCACATGCAAGAAGCTAGAATACCTCCAACTAATAAGCTGTGACTTTCAGCCATCAGTATTGCAAATGGAACACCCGACGCTTATTAAAATGGAGCTTGTGGTGTGCACATTTGGAAGTGTCGATCTTAAATCTCTTCCGAAACTAAGAACATTGATTGTTGACACGTGGATGGGTTTGGAGGAAATTTATCCGCTATCATTTGGTTATGTTCCACAACTTTCGACCCTAAAGCTAACTTATAAAGGCACAACTCGGGACAAGAATATCAAGCTAAGTGAGTTTCTTGGTAATGCGGCTATAGGCGCACTGCATCTGGATTTTGAATGTGGAAGGGTGAGTTTGAAACTTTTTTTTTTGTTAAAAAGGAAATTGTTTTAGGTTAGAATATCATGGTTTGATCATTAGCTGTATGTTGCAGATTTGGATTCAACCGGAACATCCGAAACTATTGGCTCCTGTGTTGCGGAATCTGCAGATTGCTAGTCTTACTTGCATTCATGAAGAGTGCAACCTTACTTGGATATTTTTTCTTTTAGAAGCTGCGCCTCTATTGGAAACCATGCACATAAAGGTATGTGTTCTTAGGAATACATCGGTAGCTATGTAAATAATATAATGGCATAAACTATAACGTGTTTTCCTTATATCAGAATGACATAAATATGTCACCATTCAAAAGATATTGATTCATAACAACTGCAACCTCAATTTTTTTTTTGAAACTAAACTGCAACCTCAATTGTGTTCTTCAATACTCTTGTTGACATACATTGGCAGCAAATATAGTTTATTTGATTTCTTAAAATATTGTCTATTTTTTTTGTTAACTTGGTTTCTCCTATACGCAGATGTGGGACCATGAATGCAAAACGAGTGAGGATGAGGAACTATACCAAAAGGAAGGTGATAAATTATTGAAGTGGGAATCATCTCGTGATTTTAAGCATCAAAATTTGAATGTTCTCAGAATTGTGGGCTTTCAAGTTGACGAGAAGTTTATGACGTACATAAGACGGGTAACTGAAATAGCAATTAATTTAGAAACAGTATTACTCTTTGAAAGTGTTTCTTGCAAAGGCTGTCAATTTCGCCCCTCGACGAGATATCCATACACCGGTGAGGAAAAGGTTATGACGGTGAAACAGATTTGTGAGGGGAGATCTTTGCCGATTAAATTTCGTTTCGGTGGCCATGTAATTGATTAATAGTATTATTCTTTGAAAGTGTTTCTTGCAAAGGCTGTCAATTTTGTCCCTCGACGAGATATCCATACACCAATTGAGGAAAAGGTTATGACAGTGAAACAGATTTGTGAGGGGAGATATGACAGTGAAAAGGGGAGATCTTTGCCGATTAAATTTTGTTTTGGCCATGTAAGGCCATGTAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016627