BGIOSGA016676

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Revision as of 04:33, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016676| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016676, complete gene.| tag = OS03G06...")
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Gene Name

BGIOSGA016676

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016676, complete gene.

LocusTag

OS03G0648300

Ensembl Transcript ID

BGIOSGA016676-TA

Ensembl Protein ID

BGIOSGA016676-PA

Length

7946

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23169699..23177644

Sequence Coding Region

23169699..23169793,23171231..23171372,23172413..23172658,23173108..23173335,23175446..23175559
,23176541..23177033,23177514..23177644

Genome Context

<gbrowseImage1> name=IndicaChromosome04:23169699..23177644 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:23169699..23177644 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACACGTGTGCGGGTCATGCTTCCATAAATGACTTTTTACCTACTCCGCCACACCTTTTGCTACCGTCTACCGATGGAACTGAGTTTTACTGGTCATTGAACTATATAAAAAGGTTGTTTGTCATGGGTATTTCATCGAAGTGGTTTAAATCACTGGTTGGTATAAGAAAGCAAGAAAAGGCCCGGAATGCAGAAAAACAAGAAAAGGCACAAAATGCAGAGAGCTGCGAAACAAGGACCCCTGCTGCTCAGTTGCTTCACAAACGGAAACATTCTTTGGATACTGAACGTGCAATCTTAGTAGAAGAACTTGCAGTGCAAAGTGAACCATTGACTGATGACACCAACACGCAGACAGTTTCAGATTCCATTTCTTCAGACAGTACATTGCTTGGAGTACATATTTCTCAGACCGAAGAGCATAAAACTAAAGAGGATGTGGCTGCAACACTCATTCAGTCTGCGTTTCGAGCATTCCTGGCTAGACGGGCTTTACGGGCATTGAAAGGAATAGTTATACTGCAGGCCCTTGTAAGGGGTCATATCATAAGAAAGCAGACATCAGAAACACTTCAGTGTATGCAAGCTCTAGTAAGAGCTCAAGCTCGTGTTAGAGCAAGACAAGTTCGTGTTTCTTTAGAGAACCAAGTTGCACGGAAGAAGGTCCCTGAACAAGATGATCATGAGAATCATGTTCGAGAAATTGAGGAACGCTGGTGTGGCAGTATTGGTTCTGTTGAAGAACTGCAAGCTAAAGTATTGAAAAGGCAGGAAGCTGCTGCTAAGCGTGAGAGAGCAATGGCATATGCTTTGACTCATCAGCGACAAGCAGGTTCCAGGCAACAGAAACCTACAACTCCGCAAGGACTTGAACTTGATGACAGCCACTGGGGATCAAACTGGTTAGAGAGGTGGATGGCTGTACGCCCATGGGAGAACAGGTTGCTTGACAGTAACACCAAAGAAACTATGCCACTGTGTGATGATAAGCAGGATATGGAAACAAAGTCTCAGATCACACCAAAGGGGAAAGTTCAAGTTTCAAGTGCCCTTTCTAATGGTTCTAACAAGAAGAAAGGCATAAACCATAAAAAATCATATTCTGATGTAACTTGTGCTTCATTTGGACGGTCGCCAAATATACCTTCAACATCTTTGGGATCATGCAAACAAAAGTCAAAGCTTTCAGATGAAGCTTTGGAAGAAGTCAGCTCCCAGCCAACAGATCTTGCGTCTTTGTCCACATGCCAACCAAAAGCCAAGCTTGTGCAAGCGAATACTCCAGTCAAGAAGCGGTTATCTCTGCCAACTAATGTTGGTGGGGGAGCAGCAAAGGGCGCGACCAACAGCAACTCGATTTGCAGATCCACCAGTGCCAAGTCTGATCCAAAACCACGGGCAAATGCTTCTAACCAAGCCAGGAAGCAAGTTGAGTTGCAGGCCTGA</cdnaseq>

Protein Sequence

<aaseq>MDTCAGHASINDFLPTPPHLLLPSTDGTEFYWSLNYIKRLFVMGISSKWFKSLVGIRKQEKARNAEKQEKAQNAESCETRTPAAQLLHKRKHSLDTERAILVEELAVQSEPLTDDTNTQTVSDSISSDSTLLGVHISQTEEHKTKEDVAATLIQSAFRAFLARRALRALKGIVILQALVRGHIIRKQTSETLQCMQALVRAQARVRARQVRVSLENQVARKKVPEQDDHENHVREIEERWCGSIGSVEELQAKVLKRQEAAAKRERAMAYALTHQRQAGSRQQKPTTPQGLELDDSHWGSNWLERWMAVRPWENRLLDSNTKETMPLCDDKQDMETKSQITPKGKVQVSSALSNGSNKKKGINHKKSYSDVTCASFGRSPNIPSTSLGSCKQKSKLSDEALEEVSSQPTDLASLSTCQPKAKLVQANTPVKKRLSLPTNVGGGAAKGATNSNSICRSTSAKSDPKPRANASNQARKQVELQA</aaseq>

Gene Sequence

<dnaseqindica>1..95#1533..1674#2715..2960#3410..3637#5748..5861#6843..7335#7816..7946#ATGGACACGTGTGCGGGTCATGCTTCCATAAATGACTTTTTACCTACTCCGCCACACCTTTTGCTACCGTCTACCGATGGAACTGAGTTTTACTGGTGGGTCCGTCCGAGTTTCATTTTTTACTACTACCTTTTCTTTGCCATAAAAAAATAAAAGGGGAAAATGGCGAGCCACCCTGCCGCGTGGGGCGTCTACTATTCTTTCTCTCCTCTCGCTGTTCCCGACGGAGGAAGGGTGGCAGTGGCACGCACGCACGCCGGCCTCGCCTCCGCCTCGCCTCCTCGCGCGCGCGCGGCCGGACGGGAGGCACACGGTGCGCGGCCGGCCGGCCTCATTCGCTCACCTCGTAAGCCTTCCTCCTCCCTCCTCCGTGCGGTTCCATGATGCGGCGAGGCGAGGCGCGGATTGGGGTTGGATTGGTTTCTTTTTTTTTTCTCTTCCAATTATTGACTTCGATGCTGCGTGCTCGCCGTGCTGTGCTGTTTCTTCCGGATTTCTTTGATGCGCGCTGCAGTGCTTAATCGAGAGGGTTTTTTTTTTGTTTTTCTTCGAAAGGGTTTCAACCGAAATACCGAATCCCCCTCTGCCCCCAAAGCTGGTTTCGTTTGAGGTGTAGCCGCATCTTCCTCTTTTCTTTCCTTTTTTATTTTTGGGTGAGGGTTTGGAGTGAATCTTCTATCTTGGCTTTTGCTTCCTGTGTCGAATGCTTGGAGTTCTTTTGCTGGAAAATTCTTCATGAATATCTAGCACCATTTGCAGCTTCAGAGCAGTACGGGCTCTGTTCATCGGTGTAATGCGTTCGTATTTTGCTTCCTTCAAATCTTCATCCTGTCTTGCATTTTATATCGCCCGCATTTTCTGAAGTTCTCTGAGCTAATGTGGAGTCGGATATGGATTTAGGGTGATCTGATTTGATGACGGTTTTTATGGTTTTTTTCTTTTCAATCTGATGCGCACAATAGTTTGTGCACGGACAATAATTAAGCTAACGGTTAGCAATTATAGCATTTGGTATCAACATTTTCATTACGAGTTTCATGCCAGTCTAGATGGTACTGTGTACTTGTAAGTTCTCAGTGACAACGAGAAACAGCAGAAGGATGACTACTTCCAGTAAACCACTTAATCATTTAGATTCAGTCCGATCAAAAAAAAATCATTTAGATTCAGTGATTTTCTGTCTGCTTCGATGAGATTTAGTAAACCACTTAGATTCTGTATTGCATCGCCGTTAATCATTTTATTTGTTAATCATTTTATTTCATAATTTCTTGTAGCTATGCTTTTTTTCTTTTCATGGTTCATGTGATTATGTGAAGGCTCTTGAATATTTTGGTTTCTTGTTTCAACAAGTTGTGTGTGTTAGCTCTTCCTCTACTATTGCTATCCGTTGCTTGAAGTTCTGGCAATTGTGATGTTGACTATCAGCAAGTTCCTTTACTATACACACTATTTGTTCCTTTTCATAAGTCTTAAGCAGAAGGTACGATTGCTCATTTGTATGGTAAGCATTTCAATATTCTGAAATGCAGGTCATTGAACTATATAAAAAGGTTGTTTGTCATGGGTATTTCATCGAAGTGGTTTAAATCACTGGTTGGTATAAGAAAGCAAGAAAAGGCCCGGAATGCAGAAAAACAAGAAAAGGCACAAAATGCAGAGAGCTGCGAAACAGTAAGTTATGGTATTCACCAAGATTTTGTATCGTGTAATTATGTAGCAAGTACTTGTTCTGATCGACTAAGTCTGGAGTAATGATTGTTTTGTCTGTCTTCAACTTTTTTCCTTTTTTTTGTTTCTAGTGTTTAGAGCCAGCTTGATAGGTGGATATTCTACTGTTTTTTGTCTTCCTCTGTCAGAACATGACAAATCTTGAAGAGTGAGCAAAATTGCAAAAGAGTAGATGGTTTACCAGAGTTGGTTCGGCGGATGCCACACAAGTGCTGTTGTTGACATGTCGTTGTCACATGCTTGTTGCACAACTACTCTTCTGAGTGCCCAACACAGATTATGTGGCAATACCTGGATATTAAATGTTCTGTATTGGTGTAGTAAATGTTTGGGCTCCTTACAATATGCCATTACCATCATTGTTCTAGTGCTTGTAACCCTCCTCACCTATGAAAGAAAACCAAATGGGTATATTGGAGTACTGTTGTGGTTGCTTTGGTTTTTAGTGTCCTACTGGTCTGGTAATTACAGATAGATGAATGACTGATTGTTTTGTGTAACCAACAAATGATTGCACTGCTGTTTATTCCTTGGGTGTCTGTCTTTTTTTCTTGACTTCTTTTCCTTTATTCTACTTCGCAATGCATTACTATGCAAATGCATCAGCCACTGCCCACTGGAGTGTTAGCTATTTATTTTAAATGTAGCATGTCTAACTTGCTTGGATTAAAGACCGTTATTGTAGTTGTAATAGGAGTATTCATGCTGTTCATTTTGTTTACTTCCATTCAATTAAATAAAATTTTAAATTATTAATATGATATATATTGTAGTTTAGTATCGTAGTATGTGTTTCATGCTGCCCTTGCCCAAAGTATCACTTTATAAGCTTGATTTCAAATTACCAGAGTGCATTAGTATGTTTTAAGTTTTGAGAACATATTCCTTCTTGACTCTTTTTGCCACTGCTGTACAAGTTGGCATGAACTGCTGTTTTTACTGGGCTGTCTTACCATCATGACAATGTATTAAAATTATTGTAGAGGACCCCTGCTGCTCAGTTGCTTCACAAACGGAAACATTCTTTGGATACTGAACGTGCAATCTTAGTAGAAGAACTTGCAGTGCAAAGTGAACCATTGACTGATGACACCAACACGCAGACAGTTTCAGATTCCATTTCTTCAGACAGTACATTGCTTGGAGTACATATTTCTCAGACCGAAGAGCATAAAACTAAAGAGGATGTGGCTGCAACACTCATTCAGTCTGCGTTTCGAGCATTCCTGGTATGCTCCCTTTGAATATCACTATGCTAGATAACTGATAGCATGCTGTCTCTGGTCTCTGCTCTGCATGTATAGTAAACACACTAATGAGTGTGACTGTCTTCATGTTTTAAGGACTTATCCAAATAAACAATGCAGAAATTGTCAGAATGTGATAAGAGCAAATGCATTATATTTGAACAAGATAATCCAAGAAAAAGGAGAAAGTATTTTAGTACTTAGAGGTTCTAGTTAATTTTTCAAATATCTAGAAATAGTCACATGAAACTGAATCTTCATTTGCTAAATTAAACTTAGGAAACTATCCAGATGTAGTCGTTTGTGTATAACATAGCATAGACTATGAAAGCAAAAGGCTTTAGTAAAAACATAGCTCATGATTTTCAGGCTTCCTTCATAGTCTTCTGTGTTTGAGATTTTGAACTTTTTGTTGCATTTATGATTACCAGGCTAGACGGGCTTTACGGGCATTGAAAGGAATAGTTATACTGCAGGCCCTTGTAAGGGGTCATATCATAAGAAAGCAGACATCAGAAACACTTCAGTGTATGCAAGCTCTAGTAAGAGCTCAAGCTCGTGTTAGAGCAAGACAAGTTCGTGTTTCTTTAGAGAACCAAGTTGCACGGAAGAAGGTCCCTGAACAAGATGATCATGAGAATCATGTTCGAGAAATTGAGGTAGGTCACAAATCCTATAAAAGTCATTATGACAAGATACTGAGACCTATATGCTTGGATGTCTTTTCCTCTCCCGACTCTACATATCTTGACACATAATCTTTCTTCCATCGTTTAGATTATCACCTTGTTATAAATTTATCGAGTGATATGATACTGACATGTAAATTTTGCTCAACACTGTGGATAAAAAAATATTTCTGCTCCCTCCCTACTTATTTGAAGATGGCACTTTTTTTAATAGCTATGTTGCAATGGAAATTTAAAAAGAAAACCCCACTGTACACTTTAAAGCCCTAAAAATTAAAATAAAATCATTCCTATCGTAAAATCTTCATGTAATATTTATCATCATTTTGCACCTCATTTTAAGATAAAATTTCCTCACTATTTTACTTGGGGTTAGGAAAGTGACACAAGTCCACCTACCTCACTATTTTAGGGACCTACATGGCAGTGGTGGTGGGTGGTGGCAGATTTACCACTCACCACTACCATTGTGGTCTTTCTAAAGGAGTACAGAAAGAGAGCAGATCATATATTAATCCGACTTTCAAGAAAACCAAGGAAATCACATTGTCTTCACAGGACAGGAAAACAAGCAAAAGTAAACCAAACATTTGGTACTTGACAACTTCAAAAGATCACCTGGCAACAACTCCAAACCACGACTGCCTACTGACTAAACACCATGATAGAAGCTTCACATCACATCAGGGAGAGCATTTGTCTTCACTTCTCTCACTCACATCATCAATCTTGTAACCCACTCGTCCAATGGCTCCTTTCCTTCCTCTTTTTGCAAAAGTACGCTAGTGCTGCACAAAAGACAGATTCATAAGCAACATGCAAAGCCAATTTTACTAACACGATCTCAATTACCCAGTCGATCCTAGTAAGCCATAATGATCAGCAGATACTTGCCAGCAGCCAAACTCTGGCAAAACCCCCTGGCCTCAAAGACAGAGCACCACTTATGTCATAGATGATCACATTATGACGCAACACATCTCTGACAACACACCACACAAACCTTGCTAAGGGTCACAAGAACAGGGTGTGATTGATAGTTTCTCTCTTTGAACATAACTAGCACAACTCACTCCCCTCCACTTTCTTCTTGGGGTGTCTTTTCTTGTTCTTTTCTTCTTTTCTTTCTTTTCTTTCTTCTTTTTCTTTTCTTTTCTATTAACTGAACAACACATTGAGTTCTATCACTAACAGCTAGGAAAAGAAAATGTTTGAGTTTCAAAGATATTCTACTTTTCCACACTTCCATCATCTCTTGATCAATCTCCCCTCCAAAAGTTAGCAATCCGTACATAGATTTTGAAGAATAACCTTTTTCTGCTCATGAGGCCAAATAAATCTGTCAGGATCCCCATCTAAACTAATCTCTCCTATCAGCTCTATCAATTTGCTTAAGTTGTGTTGACCCTCTGAAGATTGGGAAACACGTTTTGTGTTTGAAGATGTCACTTTTTGTGTGGAAACAATATATGTTAAGAAACGTGACTATACTATTATGCAAGTTACAAACAATTCCTTGCACCATAGGATTGGCTTAAGTTTCATGCCTATACCATTCTGGGTAAAGCCAGACCTCAACCTGGCTAGATCATGGTGCAGTCCGTAGGGGAGATGGGATGGTGATGAGCACTGGCGAAGGAGGTTGTAGCAACAATGGCATCAGTGCCATTGTACTGCACTACTGCTAGTATCAGATGGATTTGGACAGAGTGGGGAGGCAGAGGGTGGGTTGGGATTAAGAAAACAAAATCATGCATTACTGCTAGTATCAGATGGATGTAGATGGAGTGAGGAAGCAGAGGATGGGTTAGGTTAAGAAAAAAAAATCTTGGGGTTGACTTGGCCTTGAGTCGACACCTATATAATATTCAGCTTTGTGTGGTTTATCCCTAACGCTTTGAATGAATAGTGGTTTATATTCATCCATTAACTGTTCTTTGTAGCATTGGAATAAGTCACTGCCTGTTGTACCAATAACTTACGTGTGGAAAAATAGAACCAAGTAATATGAGTGGGATAAATATGTTTCTTGGCAGACAGTGTTTTATAATGTTGTTTACTTCTGCAACAATAAATGCAGGAACGCTGGTGTGGCAGTATTGGTTCTGTTGAAGAACTGCAAGCTAAAGTATTGAAAAGGCAGGAAGCTGCTGCTAAGCGTGAGAGAGCAATGGCATATGCTTTGACTCATCAGGTAATTTTGGATGGTATACCTATATACTTCTGTACAAATACTGGTTGAGAGTTGGTAAGTGAGGTAAACTTTGATTAGTAGATTAGTAGTCTAGCACTCAATGCTTTGTTAAATATGTGTGTTATTATAGTCAATTAGTTAGGAAGTCAATGTGATAATCAAGAAAGATAGTTGTGGATAATGGATTTTATCTACTTAATAATTGGTGGGTAACTGATATTTAAGTTACTTAATGACAGTATGTTACATGTTTACTCTGGTTGCAATTTATTCAATATATCTATCTAAACATAGATTTAAAAAGTGATGGTCTGAGTGAAATAACTGTTGTGATAAATAACAGTAGTATCAAATACTGATTTCATATGTATTTATGTTTATCTGAAATATATCATTTTTTGCTAGATGCTGCTTATCTATATAATTAACCAGTAACATGAATGACGCCTCATACTTTTTGTGGGCTAGAAGTCCCTGCAGTAATCAGTGAAATAAAAAATGATAGAAATCATCTCATCGAATGAGAAATGGAGAAGGACTGCTACAGATATAGATAGTACAACTATTACAGTTATATAACAAGTATTACTATATTTTCAGTCATAGCATTTCAGTTGTCTAGTGAATACAATTGTATCTCCAAATTTAGCTGTTCGGTTCAAAGTGCAATTTTTCTAGTCATATGATCATATCATAGTAAACTGCAGAAATACACTTATCTAGGTGTTGCTCGTGTCATTCTTTTCACTGTGAATCTATATGTTTATCGGATAAATCACAGTAGATCAGACTTTTTAGATGCCCTCTGTAATTTTTAGTTTCAACTAATGATCATGGAAAATTATCTGTTGCAGTTGAGAACTTAAGATTTGAGAATGCTCTTATGAATATAACAACACTGCATGTCCCCACAATTCTGTAGTCCTTTTCAATATACGTTTAGCTCTGGAGTCATTAAGTTATGCCTTTTGTTTTGGTCAGCGACAAGCAGGTTCCAGGCAACAGAAACCTACAACTCCGCAAGGACTTGAACTTGATGACAGCCACTGGGGATCAAACTGGTTAGAGAGGTGGATGGCTGTACGCCCATGGGAGAACAGGTTGCTTGACAGTAACACCAAAGAAACTATGCCACTGTGTGATGATAAGCAGGATATGGAAACAAAGTCTCAGATCACACCAAAGGGGAAAGTTCAAGTTTCAAGTGCCCTTTCTAATGGTTCTAACAAGAAGAAAGGCATAAACCATAAAAAATCATATTCTGATGTAACTTGTGCTTCATTTGGACGGTCGCCAAATATACCTTCAACATCTTTGGGATCATGCAAACAAAAGTCAAAGCTTTCAGATGAAGCTTTGGAAGAAGTCAGCTCCCAGCCAACAGATCTTGCGTCTTTGTCCACATGCCAACCAAAAGCCAAGCTTGTGCAAGCGAATACTCCAGTCAAGAAGCGGTTATCTCTGCCAACTAATGGTAAACACAATATCGATAACTTATACATATTTTTTTTCTCGGTTTTGTAGTAGTCTTGTTATTGGCAATAATTCAGAAATCTGTTGGACATTATTTGGAACCCTTCTCTCCTAAGGAAACCATATACTGTAGACTACCAAGTAGTGTTTGCTGCGAGAGTTTTTTTTTTAGTTTAAATATTTTTATACCACTAATTTAGGTGTTCAAATGGTGCAATTTTTTTCCATATTCCATTGGCATCTAAGCGTCATATTACAAAAACATTTTTTCTGCAAGAAGGTTGTACAGCTCTTTAGTTGATCAGCTGCTTGGGCCCTTGCCACCTTAGGTTTCCATTCTCATTCTGATTGTTGTATGACTTCCATGTTTGCTATGCATCATTCTAGAAACTTGCTTCTCATCTCCTTTTGCTTTCATGTATTTACTCGAAACCAACAATGTTGTAATTCAGCAAGCCATTTATTATGTGTGCATTAACAGTTGGTGGGGGAGCAGCAAAGGGCGCGACCAACAGCAACTCGATTTGCAGATCCACCAGTGCCAAGTCTGATCCAAAACCACGGGCAAATGCTTCTAACCAAGCCAGGAAGCAAGTTGAGTTGCAGGCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016676