BGIOSGA016685

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Revision as of 04:33, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016685| Description = OSIGBa0103O01.7 protein| Definition = Oryza sativa Indica Group BGIOSGA016685, complete gene.| tag = OSJNBB0091E11.14...")
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Gene Name

BGIOSGA016685

Description

OSIGBa0103O01.7 protein

Definition

Oryza sativa Indica Group BGIOSGA016685, complete gene.

LocusTag

OSJNBB0091E11.14

Ensembl Transcript ID

BGIOSGA016685-TA

Ensembl Protein ID

BGIOSGA016685-PA

Length

2437

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23325710..23328146

Sequence Coding Region

23325710..23325785,23327000..23327503,23327593..23328146

Genome Context

<gbrowseImage1> name=IndicaChromosome04:23325710..23328146 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:23325710..23328146 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTTCTATAATGGCGCGAGTGTTGTCGCGCTGCTGTTGCTGGTCTCCACGGCTGCTCGAGCTGCCGGCGATGGCCTGCTGCTCAACGGCAACTTCGAGTACCAGCCGAGCAAGTCACAGATGAACGGCACAAGGGTGATGGCGGAGTACGCGATCCCGTACTGGAAGATCACCGGGTTCGTGGAGTACATCTCGTCCGGGCAGAAGCAGGGCGACATGCTGCTGACGGTGCCAGAGGGCGCGCACGCCGTGCGGCTGGGCAACGAGGCCTCCATCGAGCAGCAGATCAGCGTGACCCGGGGCATGTACTACTCCATCACATTCAGCGCCGCGCGCACCTGCGCCCAGTCCGAGAAGCTGAACGTGTCAGTGGCTCCCGGCCCGGAGTCCGGCGAGCTCCCCATCCAGACCGTGTACACCAGCAGCGGCTGGGACTCGTACGCCTGGGCGTTCAAGGCCAAGCGCGGCCTCGTGTCGCTCATCATCCACAACCACGGCGAGGACGACGACCCCGCGTGCGGCCCGCTCATCGACTCCGTCGCCATCAAGACCCTGTACCCTCCTCAGGCCACCCAGAACAACATGCTGAGAAACGGGGACTTCGAGGAGGGGCCGTACATGTTCCCGAACGCGGCGTGGGGAGTGATGGTGCCGCCGATCTCAGAGGACGACCACTCGCCGCTGCCGGGGTGGATGGTGATGTCGGACACGAAGGCCGTCAAGTGCGTCGACTCCGCGCACTTCACCGTGCCGCACGGCGCGCGCGCCGTGGAGCTGGTGTCCGGGCTCGAGACGGCGCTGATGCAGGAGGTGCGCACCGTGCCGGGGAGGTCGTACAGGCTGGAGTTCTCGGTCGGGGACGCCAGCGACGGCTGCGTGGGTTCCATGCAGGTGAAAGGGTACGCGGGTCAGGGGTGCACGACCGTGACGTACAGCTCCCAGGGCACGGGCGGGCACACCCGCGCGTCGCTGGAGTTCGCCGCCGTCGCGAACACCACGCGGGTGGTGTTCGTCAGCTCGACGTACATCACCAAGTGGGACGGGACGCTGTGCGGGCCCGTCGTCGACGACGCCTCGCTCGTGTGCGTGTCCCAGCAGCAGCCGCCCGCTCGCCGCCTGCTTCGTCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAFYNGASVVALLLLVSTAARAAGDGLLLNGNFEYQPSKSQMNGTRVMAEYAIPYWKITGFVEYISSGQKQGDMLLTVPEGAHAVRLGNEASIEQQISVTRGMYYSITFSAARTCAQSEKLNVSVAPGPESGELPIQTVYTSSGWDSYAWAFKAKRGLVSLIIHNHGEDDDPACGPLIDSVAIKTLYPPQATQNNMLRNGDFEEGPYMFPNAAWGVMVPPISEDDHSPLPGWMVMSDTKAVKCVDSAHFTVPHGARAVELVSGLETALMQEVRTVPGRSYRLEFSVGDASDGCVGSMQVKGYAGQGCTTVTYSSQGTGGHTRASLEFAAVANTTRVVFVSSTYITKWDGTLCGPVVDDASLVCVSQQQPPARRLLRL</aaseq>

Gene Sequence

<dnaseqindica>1..76#1291..1794#1884..2437#ATGGCGTTCTATAATGGCGCGAGTGTTGTCGCGCTGCTGTTGCTGGTCTCCACGGCTGCTCGAGCTGCCGGCGATGGTGAGAGCGTCAGATAATGCTGCATTATGCACTTTTACAGTTTTACTCCTGAACCATATTAGCTTGCTTCAGTGCTTCCTATGGAATTTCCGCAAGATTCCTAGGAGTAATTTGCCATCCACTATCTAGGTGGCAATTCTTTGCCATGAACTAGATAGTACTCTGAAGAGTAATCCCTGTTGTTATTGTCATGATGTTCTTACTTCTCGGTCATTCAGTTAAGCAGTTAGCCTGTTAGTAAAACTAGCGAACTGTACCTGCAAAACTTCCTTGCAGATAAAACCAAAATGTATGATATTTTAACTGTCTTTTCGATTGACTAAGGCAGCCTGAAGAAGAAGAAGAGTTAGTAATTTCTAGTTGAATTGGTCCCCTAGCTATAGCAATGGATGATAAGGTCACTTCCGTTTCATTAGTTCTAGTTCTTAATTTCAATCAGGTTTTCTCCCTTATCTATCTAAAAAAATAGAACAGATGAGATTTTCCTTTCATTTAGGAAGGCAATGTAGGGTAGTTCTTATCTGAAACATTCTCATTTTGCTATGATAACTAGAACTAAGTAATCATTTAGGGAGGATGAACCCCAGCTTAGAAACTAGACAATGTATAGAAATAAGGACAGCAGCTTCTTATTCCTTGAAATGATATCCGTGTGCACTCTTCTTAATTAGAGTATCCCTAATCCCAAAAATGCCAGCGCTGACTTGTTAGTTAAGGTGACACAGAAATCAAATCAAATCTCTGCATTGTCACGTGCGTAGGTCTTCTGTTCAGACACAAAGAACTGCAAAATATTAGAATGAGTTAGAGTAATTTACTGATGTAAAGAATCTCATCACGTGAGACCTAGATGCTACTTAATATTCCATAATCCTAACATGAAACAAGAACGACTTTCAAGTTTCAACTGCCGTCTCGTGGATCATGGTGAAAACATGGGACCATGCGGCCGTTACAACTTACAAGCATGGGTAAAGCCTGAAGTAGTGATAAGCCAGTCATCTACACTTGCTTGCTGATGCATGTTAATGTTTTGTTACCATAACATGTTATAACTTATTCGAAATCGTCATGATCCACTGGTTTATCATAGTATATCAGCGCGACTTAACTGGTTCAGTATAACCGTGCCAAGTACTCTCTGAAGAGCAACCTGGCACGATCCAAAAACTAGAATTTGCTTACACGAGTCATGTCACTCATGCACAATGCAGGCCTGCTGCTCAACGGCAACTTCGAGTACCAGCCGAGCAAGTCACAGATGAACGGCACAAGGGTGATGGCGGAGTACGCGATCCCGTACTGGAAGATCACCGGGTTCGTGGAGTACATCTCGTCCGGGCAGAAGCAGGGCGACATGCTGCTGACGGTGCCAGAGGGCGCGCACGCCGTGCGGCTGGGCAACGAGGCCTCCATCGAGCAGCAGATCAGCGTGACCCGGGGCATGTACTACTCCATCACATTCAGCGCCGCGCGCACCTGCGCCCAGTCCGAGAAGCTGAACGTGTCAGTGGCTCCCGGCCCGGAGTCCGGCGAGCTCCCCATCCAGACCGTGTACACCAGCAGCGGCTGGGACTCGTACGCCTGGGCGTTCAAGGCCAAGCGCGGCCTCGTGTCGCTCATCATCCACAACCACGGCGAGGACGACGACCCCGCGTGCGGCCCGCTCATCGACTCCGTCGCCATCAAGACCCTGTACCCTCCTCAGGCCACCCAGAGTAAGATGCATCGTCGAACATGCGGCTAGCTATGATGTTCGATCCTTTTGCGATTACTGACGACGGACGAAACTTGACTGGTCGAGCAGACAACATGCTGAGAAACGGGGACTTCGAGGAGGGGCCGTACATGTTCCCGAACGCGGCGTGGGGAGTGATGGTGCCGCCGATCTCAGAGGACGACCACTCGCCGCTGCCGGGGTGGATGGTGATGTCGGACACGAAGGCCGTCAAGTGCGTCGACTCCGCGCACTTCACCGTGCCGCACGGCGCGCGCGCCGTGGAGCTGGTGTCCGGGCTCGAGACGGCGCTGATGCAGGAGGTGCGCACCGTGCCGGGGAGGTCGTACAGGCTGGAGTTCTCGGTCGGGGACGCCAGCGACGGCTGCGTGGGTTCCATGCAGGTGAAAGGGTACGCGGGTCAGGGGTGCACGACCGTGACGTACAGCTCCCAGGGCACGGGCGGGCACACCCGCGCGTCGCTGGAGTTCGCCGCCGTCGCGAACACCACGCGGGTGGTGTTCGTCAGCTCGACGTACATCACCAAGTGGGACGGGACGCTGTGCGGGCCCGTCGTCGACGACGCCTCGCTCGTGTGCGTGTCCCAGCAGCAGCCGCCCGCTCGCCGCCTGCTTCGTCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016685