BGIOSGA016709

From RiceWiki
Revision as of 04:33, 28 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA016709| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA016709, complete gene.| tag = H0311C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA016709

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA016709, complete gene.

LocusTag

H0311C03.1

Ensembl Transcript ID

BGIOSGA016709-TA

Ensembl Protein ID

BGIOSGA016709-PA

Length

3015

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 4

Location

Chromosome 4:23612017..23615031

Sequence Coding Region

23612017..23612142,23612245..23612314,23612714..23612819,23612986..23613103,23613188..23613310
,23613422..23613557,23613643..23613719,23613808..23613860,23614436..23614490
,23614837..23615031

Genome Context

<gbrowseImage1> name=IndicaChromosome04:23612017..23615031 source=RiceIndica04 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome04:23612017..23615031 source=RiceIndica04 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCAACCTCAACGTCCCCTCCAAGTTCCTGACATAACAAAGTCTACTCATTCTGGAGGGAACACTGTACTTGCTTATGCTTCATCAGCTATGCAAGGATACCGTAGCACCATGGAAGATGCCCATGCGACTATTGAAAATCTTGATGCTCCCACTAACACGTCATTCTTTGGTGTTTATGATGGCCATGGAGGTTCTGCTGTAGCAAGGTATTGCGCAAATCACTTGCACAATAAGGTTTTGGAGCAAGAAGATTTTAGCAGTAACCTTGCTAATGCATTGAGGCAATCCTTTTTCAGAATGGATGAGATGTTGAGAAATCAGGCGGCAAGCAAGGAATTAACTGAGTATGGTAGTGGCAACGAGTATTGGAGAACAGCTGGGCGGTCTTGGCTCAGATGTGCTCCTTGTGTGCAGGGACCTGTCTATTGTGGACCATTAGCAGAAGGATGTACAGCATGTGTGGTTCTCATTAGAAATACGCAGATCGTTGTTGGAAATGCTGGTGATGCTCGTTGTGTAATCTCAAGGAATGGTCAGGCAATCGCTTTATCCAATGATCACAAACCAAATTTTCCGGAGGAAACTCAGAGAATAGTAGCTGCAGGAGGTTCCGTATCTTTTTCTAGGGGTTCCCACCGTGTTAATAATGGAATTGCAGTATCAAGAGCAATCGGGGATTTATCTTACAAGAACAACAAAAAGTTGCGTCCTGAACAACAATTGCTGACTTGTTCTCCTGAAATTCGAGCTGACCAATTAACTGATGATACCGAGTTTCTTGTTATAGCATGTGATGGAGTCTGGGATGTCTTGGCAAACCAGGCTGTGGTTGATTTTGTACGCCTTCACTTAAACAATGGGGTGGAGCTGTCGGTAATCTGCGAGAGCCTTCTTCAGGAGGCCATTACACGAGACCCACCATCGACGGACAACATGAGCGTCATACTGGTTCGGTTCCTGCACCCAGAGGGCAACAGGGGGGCGAGGGCGGCTACTTCCAGCACCAGTACCGGCACCGTCCCCAGCCGCCACAGCAAAAGCATATCGCTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAQPQRPLQVPDITKSTHSGGNTVLAYASSAMQGYRSTMEDAHATIENLDAPTNTSFFGVYDGHGGSAVARYCANHLHNKVLEQEDFSSNLANALRQSFFRMDEMLRNQAASKELTEYGSGNEYWRTAGRSWLRCAPCVQGPVYCGPLAEGCTACVVLIRNTQIVVGNAGDARCVISRNGQAIALSNDHKPNFPEETQRIVAAGGSVSFSRGSHRVNNGIAVSRAIGDLSYKNNKKLRPEQQLLTCSPEIRADQLTDDTEFLVIACDGVWDVLANQAVVDFVRLHLNNGVELSVICESLLQEAITRDPPSTDNMSVILVRFLHPEGNRGARAATSSTSTGTVPSRHSKSISL</aaseq>

Gene Sequence

<dnaseqindica>1..126#229..298#698..803#970..1087#1172..1294#1406..1541#1627..1703#1792..1844#2420..2474#2821..3015#ATGGCTCAACCTCAACGTCCCCTCCAAGTTCCTGACATAACAAAGTCTACTCATTCTGGAGGGAACACTGTACTTGCTTATGCTTCATCAGCTATGCAAGGATACCGTAGCACCATGGAAGATGCCGTGAGTAACCTTCCAGTCTTTTGTAGGAGAAATGGGGGGTTGGCTTGCAACTAATTTTGGTGAAATTCTAAAGGCTAATTTGTGTACTCTTCTATTCTCCAGCATGCGACTATTGAAAATCTTGATGCTCCCACTAACACGTCATTCTTTGGTGTTTATGATGGCCATGGAGGTTTGATCTTCAATCTCATCCCCATATAAACAGCAAAATTCAAATTTATTGTACTGATTGAGGGGATACTCCCTTCTCATTGTATAGGGCATATTTTCTTTACGCATGCTCATTCTTCTTTAAAAGCTACACTTTCAACTTTGATGTCTCACATAATATATTGTTCATAGCTACAAAACCAATATGACGAGAAAGCACTTTGACTAATTGTTGGTCAAAACCTACAAAGTTTGACTTCTTGAAAAGTATGCTCACCCTACATAGTACATAATGTGGGGGGAGGACTAGGCTAGTAAAATTTATAATATCCATGTACATGCAACCTTCATTGCACTCAAGAGTAATGTTGCGCAATGGTTATGTAAGATGAGTATCTCAATTATTTAACTTCTATTTCAGGTTCTGCTGTAGCAAGGTATTGCGCAAATCACTTGCACAATAAGGTTTTGGAGCAAGAAGATTTTAGCAGTAACCTTGCTAATGCATTGAGGCAATCCTTTTTCAGGTTGTTTTTACAGCTAGTTAATCCATTAACTCTATATTTTGATGCCACATGAGTTCTTTTTATAAGAATGTAAGAAACAACCATCGCCACATTGGTGTTCATTATTGCACCTGTTGTGCATCCAAATATAAAATATGTAATCCTTTTTCCTCCTTAATTGTTGCAGAATGGATGAGATGTTGAGAAATCAGGCGGCAAGCAAGGAATTAACTGAGTATGGTAGTGGCAACGAGTATTGGAGAACAGCTGGGCGGTCTTGGCTCAGATGTGCTCCTTGTGTGCAGGTAATATCTCAATTGTTCTGTAGATCGAGAATCTAAGGTTTTTATATTTTTGTTATTTACTTCAAGTTGGTTTTTGTTTTCCAGGGACCTGTCTATTGTGGACCATTAGCAGAAGGATGTACAGCATGTGTGGTTCTCATTAGAAATACGCAGATCGTTGTTGGAAATGCTGGTGATGCTCGTTGTGTAATCTCAAGGAATGGTCAGGTGCAGTGACTACTTTTGTTTTCAAATGCCTAGCTGGTATTTCCTTTTTCATAATGGATGATGCACTCTAATGTCACCTAACTATTCTGTTTATTTCTGTTGTATTCGAAGGCAATCGCTTTATCCAATGATCACAAACCAAATTTTCCGGAGGAAACTCAGAGAATAGTAGCTGCAGGAGGTTCCGTATCTTTTTCTAGGGGTTCCCACCGTGTTAATAATGGAATTGCAGTATCAAGAGCAATCGGTATAGCTTATATGTTTGTTGGCGGTGTGAGGTCATACACAAACAATTTAATGTGTTGTAACTGGTATTCTTCTTCTTTATACAGGGGATTTATCTTACAAGAACAACAAAAAGTTGCGTCCTGAACAACAATTGCTGACTTGTTCTCCTGAAATTCGAGCTGTAAGGATAACTACGTTGTGTTATTGAAGTTAAGTTTGTCCCACTGGATATGAGCTGATGCAAAATGATCCCCTTTTGTCTCTGGCAGGACCAATTAACTGATGATACCGAGTTTCTTGTTATAGCATGTGATGGAGTCTGGTAAGTCCTCAGCTAAAAGTATCAGAAACAGTTCTTATATTTTTCTCCCATGTTCATGATTTCTTGCAGAATATAGGAACTCCAAATGACAATTCTCTCTCGTACGCTTATTTGTTTGTTCAAAATATTTACCGACAAAATTTGCAGATTTTGTTCAGCTCAGTTTGATTTACTGACTAGGCTACTTTACCACCATGTACATAAAGTCATTTTGTACAGTTGTTGAACCGGTGGGTCTAATTCCTTTCGTTAGTTTAGTGTGATGATAGCATTGGAGAGGTCAAATGTCTGCACCTCCCTATATATGGGTTCGGATGCTTTATTGTGTCCAGATGACTATTAACTTGGTGGCATGAATTTCAGTTTCACCTGTTCAGTTCGATGGAAATGACCATCGAATATATCTAATTTATATCATAAGGACTAAACTTGAAGTTCCTGGATGAGGAAATTATTTATGAAACCTGATGGAGTGGTGATAGGAATTTCACCCTGCCTGACCATTACTCTTTGACACAATTAATGTAACTTGCAGCTGTTTGCTCTATATTTACATATTTTTTTTGGTTTTGTAGGGATGTCTTGGCAAACCAGGCTGTGGTTGATTTTGTACGCCTTCACTTAAACAATGTGAGTGACATTCCCCGCCCCCTCTCCAGTGATACACTGTAACAGTAACCTTGCTACCAGATGAGGAAAATTTATCCGTGTGCAGATTATGCCTGTAGAAATGTCTTCATACTGAGAATTATAATTTTGTCCAGCATATCTTGCCCTGAATGTAGCTCTGACATTTAGCACAGACTATCCTCTAAATGGGATGGTGCCTGGCCTAGTTAAATAATTTTCTGTCGGATTGCCGTTTGTATAGTCTAAAAATGGAAGCGTGTGCACCATGTTTTGCACCTTGTCCATTTACAGTTATATGTTGTTATTCCTTTTGCCTTGACATATATGTATGATGTGACCAACACAGGGGGTGGAGCTGTCGGTAATCTGCGAGAGCCTTCTTCAGGAGGCCATTACACGAGACCCACCATCGACGGACAACATGAGCGTCATACTGGTTCGGTTCCTGCACCCAGAGGGCAACAGGGGGGCGAGGGCGGCTACTTCCAGCACCAGTACCGGCACCGTCCCCAGCCGCCACAGCAAAAGCATATCGCTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA016709